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The map label for this gene is atpB

Identifier: 113475845

GI number: 113475845

Start: 3433933

End: 3434682

Strand: Reverse

Name: atpB

Synonym: Tery_2204

Alternate gene names: 113475845

Gene position: 3434682-3433933 (Counterclockwise)

Preceding gene: 113475846

Following gene: 113475844

Centisome position: 44.32

GC content: 40.13

Gene sequence:

>750_bases
ATGCTAGATGTTTTAAACACTATTAACTTTTTACCTCTGGCTGAGTTGGAGGTTGGCCAGCATTTTTACTGGGAGCTAGG
TAGTTTCAAAATACATGGGCAAATTTTACTCACATCCTGGTTTGTAATTGCCTTGATACTTTTGGCTGCTTTTATATCCT
CACTCAATGTGCAGCGAATTCCTAGTGGGATGCAAAATTTCATGGAGTCTGTCCTGGAGTTTATCCGCAGTCTGACAAAA
GACCAGATAGGTGAAAAAGATTATCGCCCTTGGGTACCATTTATTGGTACGTTGTTCTTATTTATATTTGTGTCAAATTG
GTCAGGAGCGTTAGTCCCTTGGAAAGTAATAGAACTACCTTCAGGAGAACTAGCGGCCCCCACAAGTGACATTAATACTA
CAGTGGCATTAGCACTACTGACTTCCATAGCATATTTTTATGCAGGTATCAGTAAAAAAGGCTTAGGATATTTTGCAGGT
TATGCCGAGCCAGTACCTTTTATGGTTCCATTTAAAATCATAGAAGATTTTACTAAGCCTTTATCCCTGAGCTTCCGTTT
ATTTGGTAATATTCTCGCGGATGAATTGGTAGTAGGAGTACTAGTTCTGTTAGTACCTCTGTTTATCCCCCTACCACTAA
TGGTTTTGGGTCTATTCTTAAGTGCTATTCAGGCGCTAATTTTTGCTACCCTGGCTGCTAACTATATTGGAGAAGCCTTA
GAAGAGCACGGCGCAGAAGATCACGATTAA

Upstream 100 bases:

>100_bases
TAATATATGTACTGCGAACATCACTTATGCCTAACTCATAAGTCTTATGAATATTAATTAATCCACACTTTGATATAAAT
CTGGAAGCCTGAGAACCAAA

Downstream 100 bases:

>100_bases
GAGAATAAGTAGGTAGTAAAAAAACTTGCTAAAAAAAACTCAAAATCTGTTATTCTAAGCTCTTAGTGGGGTGAGCCGAG
GAGTTAAGGCTCGCAAATAA

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLDVLNTINFLPLAELEVGQHFYWELGSFKIHGQILLTSWFVIALILLAAFISSLNVQRIPSGMQNFMESVLEFIRSLTK
DQIGEKDYRPWVPFIGTLFLFIFVSNWSGALVPWKVIELPSGELAAPTSDINTTVALALLTSIAYFYAGISKKGLGYFAG
YAEPVPFMVPFKIIEDFTKPLSLSFRLFGNILADELVVGVLVLLVPLFIPLPLMVLGLFLSAIQALIFATLAANYIGEAL
EEHGAEDHD

Sequences:

>Translated_249_residues
MLDVLNTINFLPLAELEVGQHFYWELGSFKIHGQILLTSWFVIALILLAAFISSLNVQRIPSGMQNFMESVLEFIRSLTK
DQIGEKDYRPWVPFIGTLFLFIFVSNWSGALVPWKVIELPSGELAAPTSDINTTVALALLTSIAYFYAGISKKGLGYFAG
YAEPVPFMVPFKIIEDFTKPLSLSFRLFGNILADELVVGVLVLLVPLFIPLPLMVLGLFLSAIQALIFATLAANYIGEAL
EEHGAEDHD
>Mature_249_residues
MLDVLNTINFLPLAELEVGQHFYWELGSFKIHGQILLTSWFVIALILLAAFISSLNVQRIPSGMQNFMESVLEFIRSLTK
DQIGEKDYRPWVPFIGTLFLFIFVSNWSGALVPWKVIELPSGELAAPTSDINTTVALALLTSIAYFYAGISKKGLGYFAG
YAEPVPFMVPFKIIEDFTKPLSLSFRLFGNILADELVVGVLVLLVPLFIPLPLMVLGLFLSAIQALIFATLAANYIGEAL
EEHGAEDHD

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family

Homologues:

Organism=Escherichia coli, GI1790176, Length=203, Percent_Identity=29.064039408867, Blast_Score=69, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6226527, Length=271, Percent_Identity=28.0442804428044, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATP6_TRIEI (Q112Z1)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_721906.1
- ProteinModelPortal:   Q112Z1
- SMR:   Q112Z1
- STRING:   Q112Z1
- GeneID:   4243237
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2204
- NMPDR:   fig|203124.1.peg.1399
- eggNOG:   COG0356
- HOGENOM:   HBG734175
- OMA:   LHGQVFL
- PhylomeDB:   Q112Z1
- ProtClustDB:   PRK05815
- BioCyc:   TERY203124:TERY_2204-MONOMER
- HAMAP:   MF_01393
- InterPro:   IPR000568
- InterPro:   IPR023011
- Gene3D:   G3DSA:1.20.120.220
- PANTHER:   PTHR11410
- PRINTS:   PR00123
- TIGRFAMs:   TIGR01131

Pfam domain/function: PF00119 ATP-synt_A; SSF81336 ATPase_F0_A

EC number: 3.6.3.14

Molecular weight: Translated: 27603; Mature: 27603

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x16f985fc)-; HASH(0x16a1d7d4)-; HASH(0x17f8e28c)-; HASH(0x16a026a0)-; HASH(0x182d7f74)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVLNTINFLPLAELEVGQHFYWELGSFKIHGQILLTSWFVIALILLAAFISSLNVQRI
CCCHHHHHCCCCCHHHHHCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH
PSGMQNFMESVLEFIRSLTKDQIGEKDYRPWVPFIGTLFLFIFVSNWSGALVPWKVIELP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
SGELAAPTSDINTTVALALLTSIAYFYAGISKKGLGYFAGYAEPVPFMVPFKIIEDFTKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHH
LSLSFRLFGNILADELVVGVLVLLVPLFIPLPLMVLGLFLSAIQALIFATLAANYIGEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEHGAEDHD
HHCCCCCCH
>Mature Secondary Structure
MLDVLNTINFLPLAELEVGQHFYWELGSFKIHGQILLTSWFVIALILLAAFISSLNVQRI
CCCHHHHHCCCCCHHHHHCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH
PSGMQNFMESVLEFIRSLTKDQIGEKDYRPWVPFIGTLFLFIFVSNWSGALVPWKVIELP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
SGELAAPTSDINTTVALALLTSIAYFYAGISKKGLGYFAGYAEPVPFMVPFKIIEDFTKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHH
LSLSFRLFGNILADELVVGVLVLLVPLFIPLPLMVLGLFLSAIQALIFATLAANYIGEAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEHGAEDHD
HHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA