Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is gtaB [H]

Identifier: 113475760

GI number: 113475760

Start: 3298305

End: 3299189

Strand: Reverse

Name: gtaB [H]

Synonym: Tery_2112

Alternate gene names: 113475760

Gene position: 3299189-3298305 (Counterclockwise)

Preceding gene: 113475765

Following gene: 113475759

Centisome position: 42.57

GC content: 35.59

Gene sequence:

>885_bases
ATGACAGAAACAACAGCTAAAGTAAGAAAAGCAGTAATTCCAGCGGCAGGTTTCGGTACAAGGATGTTCCCAGTTACTAA
AGTTGTGAAAAAAGAACTATTTCCCATAATAGACAAAGATGGCAGAGCTAAACCAATAATTCAAATAATTATTGAAGAGG
CTATAAGTGGTGGAATAGAAGAGGTGGGAGTGGTGGTACAGGAAAGCGATCGCCAAATTTTTACAGACTATTTCCAAGGT
GTTCCTAGTTATTATGAAAAACTCTCCCCGGAAAAACAAGAATATTGCCAATATTTACAAAATTTAGGTAATAAAATTAC
TTTCTTAACTCAAGAGCAGCAGGCTGGTTATGGTCATGCTGTTTTCTGTGCTAAAGATTGGGTAAGAGACGAACCTTTTT
TGCTATTACTGGGGGATCATCTTTATACTTCTGAGGTCACAAAATCCTGTACAAGTCAATTTTTGCAAGTCTATGAACAG
ACGAATAAAAGTGTACTTGGGGTGAGAATTATCCCAGGAACAGAAATACATCATTATGGTTGTATTGGTGGAACTTTAGT
TGCCGATAGTCTAATTAATATTGATACAATTTATGAAAAACCAGACCTAAATTATGCCAGAGAAAAGCTTCATGTGTTAG
GGATGAAAAAAGAACACTTTTTAGGAGTTTTTGGGATATATGTATTAACCGCAAGAATATTTGATTACCTAGAAGAAAAC
ATTAAACAAAATGCGAGGGAAAAAGGAGAATTTCAACTGACATCTTGTTTAGATAAATTACAAAAAGCAGAAGGAATGAC
AGGGTATTTAGTCAAAGGGCGATGTTTTGATACGGGGATGCCAGATGTGTATTGGCAGACAATGATTGATTTTCGTAATG
CTTGA

Upstream 100 bases:

>100_bases
GAATAGTAAACAAATTTTCTTAAAAATTCAATTTATACAAGTTTAAAAGTCTAAATTTTACTAATTTTTATTTATTAGTT
AACCAAAAAATCAAAAATAT

Downstream 100 bases:

>100_bases
TAGTATGATTGTAGGGGAAAATCAGAAAACCAGGAAAAAACTTACTATGACTCATTTTGGTCTGATTTGTCCGGCATTGA
CAGGACACCTAAATCCAATG

Product: UDP-glucose pyrophosphorylase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTETTAKVRKAVIPAAGFGTRMFPVTKVVKKELFPIIDKDGRAKPIIQIIIEEAISGGIEEVGVVVQESDRQIFTDYFQG
VPSYYEKLSPEKQEYCQYLQNLGNKITFLTQEQQAGYGHAVFCAKDWVRDEPFLLLLGDHLYTSEVTKSCTSQFLQVYEQ
TNKSVLGVRIIPGTEIHHYGCIGGTLVADSLINIDTIYEKPDLNYAREKLHVLGMKKEHFLGVFGIYVLTARIFDYLEEN
IKQNAREKGEFQLTSCLDKLQKAEGMTGYLVKGRCFDTGMPDVYWQTMIDFRNA

Sequences:

>Translated_294_residues
MTETTAKVRKAVIPAAGFGTRMFPVTKVVKKELFPIIDKDGRAKPIIQIIIEEAISGGIEEVGVVVQESDRQIFTDYFQG
VPSYYEKLSPEKQEYCQYLQNLGNKITFLTQEQQAGYGHAVFCAKDWVRDEPFLLLLGDHLYTSEVTKSCTSQFLQVYEQ
TNKSVLGVRIIPGTEIHHYGCIGGTLVADSLINIDTIYEKPDLNYAREKLHVLGMKKEHFLGVFGIYVLTARIFDYLEEN
IKQNAREKGEFQLTSCLDKLQKAEGMTGYLVKGRCFDTGMPDVYWQTMIDFRNA
>Mature_293_residues
TETTAKVRKAVIPAAGFGTRMFPVTKVVKKELFPIIDKDGRAKPIIQIIIEEAISGGIEEVGVVVQESDRQIFTDYFQGV
PSYYEKLSPEKQEYCQYLQNLGNKITFLTQEQQAGYGHAVFCAKDWVRDEPFLLLLGDHLYTSEVTKSCTSQFLQVYEQT
NKSVLGVRIIPGTEIHHYGCIGGTLVADSLINIDTIYEKPDLNYAREKLHVLGMKKEHFLGVFGIYVLTARIFDYLEENI
KQNAREKGEFQLTSCLDKLQKAEGMTGYLVKGRCFDTGMPDVYWQTMIDFRNA

Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used as a membr

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=303, Percent_Identity=30.3630363036304, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1788355, Length=291, Percent_Identity=25.7731958762887, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005771
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 33399; Mature: 33268

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTAKVRKAVIPAAGFGTRMFPVTKVVKKELFPIIDKDGRAKPIIQIIIEEAISGGIE
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHH
EVGVVVQESDRQIFTDYFQGVPSYYEKLSPEKQEYCQYLQNLGNKITFLTQEQQAGYGHA
HHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCE
VFCAKDWVRDEPFLLLLGDHLYTSEVTKSCTSQFLQVYEQTNKSVLGVRIIPGTEIHHYG
EEEEHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
CIGGTLVADSLINIDTIYEKPDLNYAREKLHVLGMKKEHFLGVFGIYVLTARIFDYLEEN
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKQNAREKGEFQLTSCLDKLQKAEGMTGYLVKGRCFDTGMPDVYWQTMIDFRNA
HHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TETTAKVRKAVIPAAGFGTRMFPVTKVVKKELFPIIDKDGRAKPIIQIIIEEAISGGIE
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHH
EVGVVVQESDRQIFTDYFQGVPSYYEKLSPEKQEYCQYLQNLGNKITFLTQEQQAGYGHA
HHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCE
VFCAKDWVRDEPFLLLLGDHLYTSEVTKSCTSQFLQVYEQTNKSVLGVRIIPGTEIHHYG
EEEEHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
CIGGTLVADSLINIDTIYEKPDLNYAREKLHVLGMKKEHFLGVFGIYVLTARIFDYLEEN
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKQNAREKGEFQLTSCLDKLQKAEGMTGYLVKGRCFDTGMPDVYWQTMIDFRNA
HHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320212; 8126437; 9384377; 9298659 [H]