| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475721
Identifier: 113475721
GI number: 113475721
Start: 3231810
End: 3232271
Strand: Reverse
Name: 113475721
Synonym: Tery_2068
Alternate gene names: NA
Gene position: 3232271-3231810 (Counterclockwise)
Preceding gene: 113475722
Following gene: 113475720
Centisome position: 41.71
GC content: 44.37
Gene sequence:
>462_bases ATGTTATTATGCTCAGAGCACATCCAAATAGTTCAGTTATCAAATATGAAATGGATATTTCTGGGAATGCTTAGTGTTGC TACACTCCTATCCGTAATATTACCTGCAAAATCAAATCAACTTAACAACTTTTACGAAAGTTGCTACAAAAACGGAAATG TGCAGAGCTGCGCGGCCTTAGGCATTCTTTGCGGGGAGGGAAATTCACGAGCTTGCAACTTAGTTAACACTGCCACTCAA GGAGGCATTGCTCAGATCAACTATTATTGCCGACAGCGAAATAATACTCGCGCCTGTAATTTTTTAGCCCTAATTAACCA AAGTGGCGGCCCAAGGAACCTAGGACGTTTTTGCCGTCGGGGCGATCGCAGAGCTTGTAATGCTCTCAGTGTTATTGCCT GCTATGCATCAGAAAACGCAAGAGCTGGCAGAGGCCCTAGGTGCACCCTACTTAGTGAGTAG
Upstream 100 bases:
>100_bases TTATCTAGCTTTTTTGGGTTTAGTGACCTCAAGCCAAGCTACAAAGTAATAAACTTTAGGGTGAACCAATGAAAAATTCT ATGGAAGCAACCATATTTTC
Downstream 100 bases:
>100_bases ATATCACTGGAATTATATCAGTTTTATATAGCATTTCATTTATATATATAGAAAAACCAGACAAAGTTATGCGAATAGTA CAAATATTACCATCTATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MLLCSEHIQIVQLSNMKWIFLGMLSVATLLSVILPAKSNQLNNFYESCYKNGNVQSCAALGILCGEGNSRACNLVNTATQ GGIAQINYYCRQRNNTRACNFLALINQSGGPRNLGRFCRRGDRRACNALSVIACYASENARAGRGPRCTLLSE
Sequences:
>Translated_153_residues MLLCSEHIQIVQLSNMKWIFLGMLSVATLLSVILPAKSNQLNNFYESCYKNGNVQSCAALGILCGEGNSRACNLVNTATQ GGIAQINYYCRQRNNTRACNFLALINQSGGPRNLGRFCRRGDRRACNALSVIACYASENARAGRGPRCTLLSE >Mature_153_residues MLLCSEHIQIVQLSNMKWIFLGMLSVATLLSVILPAKSNQLNNFYESCYKNGNVQSCAALGILCGEGNSRACNLVNTATQ GGIAQINYYCRQRNNTRACNFLALINQSGGPRNLGRFCRRGDRRACNALSVIACYASENARAGRGPRCTLLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16714; Mature: 16714
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLCSEHIQIVQLSNMKWIFLGMLSVATLLSVILPAKSNQLNNFYESCYKNGNVQSCAAL CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHE GILCGEGNSRACNLVNTATQGGIAQINYYCRQRNNTRACNFLALINQSGGPRNLGRFCRR EEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHC GDRRACNALSVIACYASENARAGRGPRCTLLSE CCCHHHHHHHEEEEECCCCCCCCCCCEEEECCC >Mature Secondary Structure MLLCSEHIQIVQLSNMKWIFLGMLSVATLLSVILPAKSNQLNNFYESCYKNGNVQSCAAL CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHE GILCGEGNSRACNLVNTATQGGIAQINYYCRQRNNTRACNFLALINQSGGPRNLGRFCRR EEEECCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHC GDRRACNALSVIACYASENARAGRGPRCTLLSE CCCHHHHHHHEEEEECCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA