| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475693
Identifier: 113475693
GI number: 113475693
Start: 3176638
End: 3178710
Strand: Reverse
Name: 113475693
Synonym: Tery_2038
Alternate gene names: NA
Gene position: 3178710-3176638 (Counterclockwise)
Preceding gene: 113475694
Following gene: 113475692
Centisome position: 41.02
GC content: 42.98
Gene sequence:
>2073_bases ATGACACAACCAACTCCTCAAGACCAATATATGCTCGAATTGGTAAACAGAAGTCGAGCAGATCCTCAAGCAGAAGCTGA TTTATATCTAGATGGAAACCTAAACGAAGGACTTTCTGAAGGTCAAATTTCCTCCGATGCCAAACAACCTTTAGCATTTA ATCTTAACCTCAATACTGCTGCTAAAGGTCATAGTCAATGGATGTTAGATAATAACATATTTAGTCATACAGGAGCCAAT GGTAAGAAATCAGGAGACCGTATGCGGGATTCGGGGTACATATTCACAGGAACATATGGTTCTGGGGAAAATATAGCTTG GAGAGGAACAACAGGTACGCCCAACTTCACCACTTTTGTGGAGAAAAACCACGAAAACCTCGTCCGCAGTAACAGTCATC GGCTAACCCTGATGAGCAGTAACCTTCAGGAAGTCGGAATTTCTTCACTACAGGGAGAGTTTACATTTGAGGGTATAAAT TACAACACAGTGATGACTACCCAAAATTTTGCTTATTCTGGAACGAGTGGCCCATTCATCACAGGTGTGGCCTATACTGA TGCTGTTAAGGATGACAATTTCTATACAGTCGGTGAAGGAATAAGCGGGATAATAGTTACAGCAGTTAATACTAATAATA GTAATAATATTTTCACAACCACCACTTGGGATGCAGGTGGTTATAGTTTAGATGTAGACCCAAATCAAACTTACGATGTT ACTTTTTCTGGGGATCTTAATGGGGATGGTCAGGCAGGGGATACAGTAACTTATCAAGTTAAAGTTAGTTCCGAAAATGT CAAATTAGATGTAGTCAGTGACAGCTTACCTACTCCGAATGCACCACCCATAGCGGTAAATGACACCACCAACACCAGCA AAGGACAAGCAGTCACCTTCAGCATTACGGAAAACGACTCAGATACAGACGGTACTCTAGAGCTAGCAACAGTAGACCTA GACCCATCTACAGCCGGACGGCAAAACACTCTGACAGTAGCAAATGAAGGAACCTACACAGTAGATAATGCTGGCAACCT TACCTTCACCCCCGAACCAGAATTTGCTGGAACTACGGCTACTATCACCTACACAGTAGAAGATAATAATGGTGAAGTCT CAAACCCAGCCGAAATAGGTGTTACAGTCATCCCATTCGACCCATTAGATCAACCAGTAAAGTTTGATTTTAACGGCGAT GGAGTAGCAGATATTCTTTGGCGTCGTGAAAATGGACCTAACCGCATTTGGCTGATGAATGATAATGGTACGCGTAAGAG TACGAAAAACCCGGGAAATTTTGGAGCTGCATGGGATGTGGCAGGAGTGGGAGATTTTAATGCTGATGGAGTAGCAGACA TTTTCTGGCGTCATAATAAAAATAGAGGTAACCGCGTTTGGTTGATGAATGATAACGGTACGCGTAAGAGTACGAAAAAC CCGGGAAATTTTGGAGCTGCATGGGATGTGGTAGGAGTGGGAGATTTTAATGCTGATGGAGTGGATGACATTCTCTGGCG TCGTGACAATCAAAAATTAAACCGCATTTGGTTGATGAATAATAACGGCAAACGTAAACAACTGGTTAACCCGGGAAATT TTGGAGCTGCATGGGATGTAGCTGGAGTTGCAGATTTCAATGCTGATGGAGTGGATGACATTCTCTGGCGTCATAACAAT GGACGGAACAGAATTTCGTTTATGAATAATGACGGCAAGCTTGATAATACAGTTAACCCCGGAGGTTTAGGTTCAACATG GGATGTAGCCGGAGTTGCAGATTTCAATGCTGATGGAGTGGATGACATTCTCTGGCGTAAAAAAAATGGAACTAACAGCA TTTGGTTAATGAATGGTGATGGCACACATGATGATATAATTAACCCAGGGTCTTTCGGTTCAGCTTGGGATGTGGCAGGA GTTGCAGATTTCAATGCTGATGGACTGACAGATATTCTCTGGCGCCATGACAATGGAGCTAACCGTATTTGGTTGATGGA TGATGATAGCACCCGTGCTCAGAACCTTAACCCTGGAGCTTTCGGTTCAGCTTGGGATATAGTTGGGATGTAA
Upstream 100 bases:
>100_bases CTATTCAGGAAATATCTAATGTATATTAATCTACATTAGATTGGTAAAAAAATACCTCCTACTTTGTCAACTACTGTTAT TTATATTTACAACATAAACT
Downstream 100 bases:
>100_bases AATATTAACAGCCTCCCGACGCTACTTTATGAAACAGCAGGGGTTTTCATCATCTTGGTTGCTGAGGGGGCTTTCTATTT TTTGCTTCTCGCTTTTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MTQPTPQDQYMLELVNRSRADPQAEADLYLDGNLNEGLSEGQISSDAKQPLAFNLNLNTAAKGHSQWMLDNNIFSHTGAN GKKSGDRMRDSGYIFTGTYGSGENIAWRGTTGTPNFTTFVEKNHENLVRSNSHRLTLMSSNLQEVGISSLQGEFTFEGIN YNTVMTTQNFAYSGTSGPFITGVAYTDAVKDDNFYTVGEGISGIIVTAVNTNNSNNIFTTTTWDAGGYSLDVDPNQTYDV TFSGDLNGDGQAGDTVTYQVKVSSENVKLDVVSDSLPTPNAPPIAVNDTTNTSKGQAVTFSITENDSDTDGTLELATVDL DPSTAGRQNTLTVANEGTYTVDNAGNLTFTPEPEFAGTTATITYTVEDNNGEVSNPAEIGVTVIPFDPLDQPVKFDFNGD GVADILWRRENGPNRIWLMNDNGTRKSTKNPGNFGAAWDVAGVGDFNADGVADIFWRHNKNRGNRVWLMNDNGTRKSTKN PGNFGAAWDVVGVGDFNADGVDDILWRRDNQKLNRIWLMNNNGKRKQLVNPGNFGAAWDVAGVADFNADGVDDILWRHNN GRNRISFMNNDGKLDNTVNPGGLGSTWDVAGVADFNADGVDDILWRKKNGTNSIWLMNGDGTHDDIINPGSFGSAWDVAG VADFNADGLTDILWRHDNGANRIWLMDDDSTRAQNLNPGAFGSAWDIVGM
Sequences:
>Translated_690_residues MTQPTPQDQYMLELVNRSRADPQAEADLYLDGNLNEGLSEGQISSDAKQPLAFNLNLNTAAKGHSQWMLDNNIFSHTGAN GKKSGDRMRDSGYIFTGTYGSGENIAWRGTTGTPNFTTFVEKNHENLVRSNSHRLTLMSSNLQEVGISSLQGEFTFEGIN YNTVMTTQNFAYSGTSGPFITGVAYTDAVKDDNFYTVGEGISGIIVTAVNTNNSNNIFTTTTWDAGGYSLDVDPNQTYDV TFSGDLNGDGQAGDTVTYQVKVSSENVKLDVVSDSLPTPNAPPIAVNDTTNTSKGQAVTFSITENDSDTDGTLELATVDL DPSTAGRQNTLTVANEGTYTVDNAGNLTFTPEPEFAGTTATITYTVEDNNGEVSNPAEIGVTVIPFDPLDQPVKFDFNGD GVADILWRRENGPNRIWLMNDNGTRKSTKNPGNFGAAWDVAGVGDFNADGVADIFWRHNKNRGNRVWLMNDNGTRKSTKN PGNFGAAWDVVGVGDFNADGVDDILWRRDNQKLNRIWLMNNNGKRKQLVNPGNFGAAWDVAGVADFNADGVDDILWRHNN GRNRISFMNNDGKLDNTVNPGGLGSTWDVAGVADFNADGVDDILWRKKNGTNSIWLMNGDGTHDDIINPGSFGSAWDVAG VADFNADGLTDILWRHDNGANRIWLMDDDSTRAQNLNPGAFGSAWDIVGM >Mature_689_residues TQPTPQDQYMLELVNRSRADPQAEADLYLDGNLNEGLSEGQISSDAKQPLAFNLNLNTAAKGHSQWMLDNNIFSHTGANG KKSGDRMRDSGYIFTGTYGSGENIAWRGTTGTPNFTTFVEKNHENLVRSNSHRLTLMSSNLQEVGISSLQGEFTFEGINY NTVMTTQNFAYSGTSGPFITGVAYTDAVKDDNFYTVGEGISGIIVTAVNTNNSNNIFTTTTWDAGGYSLDVDPNQTYDVT FSGDLNGDGQAGDTVTYQVKVSSENVKLDVVSDSLPTPNAPPIAVNDTTNTSKGQAVTFSITENDSDTDGTLELATVDLD PSTAGRQNTLTVANEGTYTVDNAGNLTFTPEPEFAGTTATITYTVEDNNGEVSNPAEIGVTVIPFDPLDQPVKFDFNGDG VADILWRRENGPNRIWLMNDNGTRKSTKNPGNFGAAWDVAGVGDFNADGVADIFWRHNKNRGNRVWLMNDNGTRKSTKNP GNFGAAWDVVGVGDFNADGVDDILWRRDNQKLNRIWLMNNNGKRKQLVNPGNFGAAWDVAGVADFNADGVDDILWRHNNG RNRISFMNNDGKLDNTVNPGGLGSTWDVAGVADFNADGVDDILWRKKNGTNSIWLMNGDGTHDDIINPGSFGSAWDVAGV ADFNADGLTDILWRHDNGANRIWLMDDDSTRAQNLNPGAFGSAWDIVGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74810; Mature: 74679
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPTPQDQYMLELVNRSRADPQAEADLYLDGNLNEGLSEGQISSDAKQPLAFNLNLNTA CCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCC AKGHSQWMLDNNIFSHTGANGKKSGDRMRDSGYIFTGTYGSGENIAWRGTTGTPNFTTFV CCCCCEEEEECCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEE EKNHENLVRSNSHRLTLMSSNLQEVGISSLQGEFTFEGINYNTVMTTQNFAYSGTSGPFI ECCCHHHHHCCCCEEEEEECCHHHHCHHHCCCEEEEECCCEEEEEEECCEEECCCCCCEE TGVAYTDAVKDDNFYTVGEGISGIIVTAVNTNNSNNIFTTTTWDAGGYSLDVDPNQTYDV EEEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEECCCCCEEEE TFSGDLNGDGQAGDTVTYQVKVSSENVKLDVVSDSLPTPNAPPIAVNDTTNTSKGQAVTF EEECCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEE SITENDSDTDGTLELATVDLDPSTAGRQNTLTVANEGTYTVDNAGNLTFTPEPEFAGTTA EEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCEEECCCCCCCCCEE TITYTVEDNNGEVSNPAEIGVTVIPFDPLDQPVKFDFNGDGVADILWRRENGPNRIWLMN EEEEEEECCCCCCCCCHHCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEC DNGTRKSTKNPGNFGAAWDVAGVGDFNADGVADIFWRHNKNRGNRVWLMNDNGTRKSTKN CCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCC PGNFGAAWDVVGVGDFNADGVDDILWRRDNQKLNRIWLMNNNGKRKQLVNPGNFGAAWDV CCCCCCEEEEEEECCCCCCCHHHHHEECCCCCEEEEEEECCCCCCEEECCCCCCCCEEEC AGVADFNADGVDDILWRHNNGRNRISFMNNDGKLDNTVNPGGLGSTWDVAGVADFNADGV CEEECCCCCCCCHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC DDILWRKKNGTNSIWLMNGDGTHDDIINPGSFGSAWDVAGVADFNADGLTDILWRHDNGA HHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC NRIWLMDDDSTRAQNLNPGAFGSAWDIVGM CEEEEEECCCCHHCCCCCCCCCCCEEECCC >Mature Secondary Structure TQPTPQDQYMLELVNRSRADPQAEADLYLDGNLNEGLSEGQISSDAKQPLAFNLNLNTA CCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCC AKGHSQWMLDNNIFSHTGANGKKSGDRMRDSGYIFTGTYGSGENIAWRGTTGTPNFTTFV CCCCCEEEEECCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEE EKNHENLVRSNSHRLTLMSSNLQEVGISSLQGEFTFEGINYNTVMTTQNFAYSGTSGPFI ECCCHHHHHCCCCEEEEEECCHHHHCHHHCCCEEEEECCCEEEEEEECCEEECCCCCCEE TGVAYTDAVKDDNFYTVGEGISGIIVTAVNTNNSNNIFTTTTWDAGGYSLDVDPNQTYDV EEEEEECCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEECCCCCEEEE TFSGDLNGDGQAGDTVTYQVKVSSENVKLDVVSDSLPTPNAPPIAVNDTTNTSKGQAVTF EEECCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCEEEE SITENDSDTDGTLELATVDLDPSTAGRQNTLTVANEGTYTVDNAGNLTFTPEPEFAGTTA EEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEECCCCCEEECCCCCCCCCEE TITYTVEDNNGEVSNPAEIGVTVIPFDPLDQPVKFDFNGDGVADILWRRENGPNRIWLMN EEEEEEECCCCCCCCCHHCCEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEC DNGTRKSTKNPGNFGAAWDVAGVGDFNADGVADIFWRHNKNRGNRVWLMNDNGTRKSTKN CCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCC PGNFGAAWDVVGVGDFNADGVDDILWRRDNQKLNRIWLMNNNGKRKQLVNPGNFGAAWDV CCCCCCEEEEEEECCCCCCCHHHHHEECCCCCEEEEEEECCCCCCEEECCCCCCCCEEEC AGVADFNADGVDDILWRHNNGRNRISFMNNDGKLDNTVNPGGLGSTWDVAGVADFNADGV CEEECCCCCCCCHHEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC DDILWRKKNGTNSIWLMNGDGTHDDIINPGSFGSAWDVAGVADFNADGLTDILWRHDNGA HHHEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC NRIWLMDDDSTRAQNLNPGAFGSAWDIVGM CEEEEEECCCCHHCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA