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The map label for this gene is 113475678

Identifier: 113475678

GI number: 113475678

Start: 3146743

End: 3147933

Strand: Reverse

Name: 113475678

Synonym: Tery_2018

Alternate gene names: NA

Gene position: 3147933-3146743 (Counterclockwise)

Preceding gene: 113475680

Following gene: 113475677

Centisome position: 40.62

GC content: 38.37

Gene sequence:

>1191_bases
ATGAAAAGGCTAATGAAAAATTACGATTGGATTGTAGTTGGGGGTGGTATAACTGGGGCAGCTCTTAGTTATGAATTAGC
AAAAAAAGGTTTTACTGTACTCCTATTAGAAAAATATTCTACTTTAAACAATGCAACTCGTTATAGTTATGCTAGTTTAC
CCTACTGGTTAGGTAATACGGATTTGATTAAACAACTTGTTCAGGAGGGAAAACAACGCCATCATTGTTTATCTGAAGAG
TTAGAAGCAGATACTCAGTTTCGAGAGTTAGATTTATTGCTAACTATCGCCCCAGAAGACGACCCAGGAAAAATAGCTAC
TAATTTCTCCAAGTATAATATTTTACCTCGGCTCATAAGTGTCGAAGAAGCCTTTGAAATGGAACCCTTACTAAACAAAG
AGGCGATCGCAGGAGCTTTTACTGTTAGTCAAGGTCATGTTTCTCCAGAAGCCATAACTCTAGGATATTTCCAAGCATTT
ACTAGGTTAGGAGGTCAAATTGAAATTATAGAGGTAACTGGGTTCGTTAAAACTGGTGATAATGCAAGGATAACCGGGGT
ATACACTAAAAGCAAAACTTATCACACAGCTAATGTTGTTATTTGTGCAGGAGGAATTTCCCGTCACTTCCTAAAGTCAG
CAGGTATTTCTACTCGTGTTTATTTTACCCATGCTGAAATGCTAGAAACTCCTCCTGTAGAACTACAACTAAAGACTATC
GTTTTGCCAGCACTAACAAGTCGTTTAAATTATGAAATTGCTACAAGTACAGTTGAGTGCGAGAAAATGTGGGATGAACC
TGGTCATGAGTTTGTACCGTTTAGCTTAGACCCTGGTGCAATTCAATTTAAAAATAATAGCATTAGAATAGGTCAAATTT
CCCGCGTACTCACTGACCCCTACGCTAAAGTTGATCCTATTCAAAGTGAAGCCACTATGCGAGTAGAAATAGGAAAAGTT
TTGCCTGCACTAGAAGATTTACCAGCAACCTGGCATCACTGCTTAGTAGCATACAGTGCTGACGACTTACCTCTCATCGG
AGCTATTCCTAATTTAGAAGGAATACATATTTTTTCTGGCTTTAGTAGTCCATTTACACTGGTACCTCCCCTAGCTAAAA
GATTTGCTAATTATGTAGCTGGGGAAAATGATCAGATTATCCAGCAATTATCTCCCAGTCGGTTTCTCTAA

Upstream 100 bases:

>100_bases
TATATCGAACAATTCATGGATCAACTGCATAATTATTTGGTTAAATAATTTAATATTTGTTTTTAATTAAATACCTACTA
TCATATCAGAAAAGTTTTAG

Downstream 100 bases:

>100_bases
TTAATTAGTTCTCCTCATAGCTAGATCCTTACCTAAAATTCCGTTTTGAAAAAAGAATGTTACGAATAGTAAGGGTGATA
AAAAGCTCTTAGAGGAGATG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Sarcosine Dehydrogenase; Glycine/D-Amino Acid Oxidase Deaminating; Glycine Cleavage T-Protein; Dye-Linked L-Proline Dehydrogenase Beta2 Subunit; Pyruvate Dehydrogenase Phosphatase Regulatory Subunit; Glycine Cleavage System T Protein; Proline Dehydrogenase Beta Subunit

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKRLMKNYDWIVVGGGITGAALSYELAKKGFTVLLLEKYSTLNNATRYSYASLPYWLGNTDLIKQLVQEGKQRHHCLSEE
LEADTQFRELDLLLTIAPEDDPGKIATNFSKYNILPRLISVEEAFEMEPLLNKEAIAGAFTVSQGHVSPEAITLGYFQAF
TRLGGQIEIIEVTGFVKTGDNARITGVYTKSKTYHTANVVICAGGISRHFLKSAGISTRVYFTHAEMLETPPVELQLKTI
VLPALTSRLNYEIATSTVECEKMWDEPGHEFVPFSLDPGAIQFKNNSIRIGQISRVLTDPYAKVDPIQSEATMRVEIGKV
LPALEDLPATWHHCLVAYSADDLPLIGAIPNLEGIHIFSGFSSPFTLVPPLAKRFANYVAGENDQIIQQLSPSRFL

Sequences:

>Translated_396_residues
MKRLMKNYDWIVVGGGITGAALSYELAKKGFTVLLLEKYSTLNNATRYSYASLPYWLGNTDLIKQLVQEGKQRHHCLSEE
LEADTQFRELDLLLTIAPEDDPGKIATNFSKYNILPRLISVEEAFEMEPLLNKEAIAGAFTVSQGHVSPEAITLGYFQAF
TRLGGQIEIIEVTGFVKTGDNARITGVYTKSKTYHTANVVICAGGISRHFLKSAGISTRVYFTHAEMLETPPVELQLKTI
VLPALTSRLNYEIATSTVECEKMWDEPGHEFVPFSLDPGAIQFKNNSIRIGQISRVLTDPYAKVDPIQSEATMRVEIGKV
LPALEDLPATWHHCLVAYSADDLPLIGAIPNLEGIHIFSGFSSPFTLVPPLAKRFANYVAGENDQIIQQLSPSRFL
>Mature_396_residues
MKRLMKNYDWIVVGGGITGAALSYELAKKGFTVLLLEKYSTLNNATRYSYASLPYWLGNTDLIKQLVQEGKQRHHCLSEE
LEADTQFRELDLLLTIAPEDDPGKIATNFSKYNILPRLISVEEAFEMEPLLNKEAIAGAFTVSQGHVSPEAITLGYFQAF
TRLGGQIEIIEVTGFVKTGDNARITGVYTKSKTYHTANVVICAGGISRHFLKSAGISTRVYFTHAEMLETPPVELQLKTI
VLPALTSRLNYEIATSTVECEKMWDEPGHEFVPFSLDPGAIQFKNNSIRIGQISRVLTDPYAKVDPIQSEATMRVEIGKV
LPALEDLPATWHHCLVAYSADDLPLIGAIPNLEGIHIFSGFSSPFTLVPPLAKRFANYVAGENDQIIQQLSPSRFL

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43913; Mature: 43913

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLMKNYDWIVVGGGITGAALSYELAKKGFTVLLLEKYSTLNNATRYSYASLPYWLGNT
CCCHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEHHHHCCCCCCCEECCCCEECCCH
DLIKQLVQEGKQRHHCLSEELEADTQFRELDLLLTIAPEDDPGKIATNFSKYNILPRLIS
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEECCHHHHHHHHHHH
VEEAFEMEPLLNKEAIAGAFTVSQGHVSPEAITLGYFQAFTRLGGQIEIIEVTGFVKTGD
HHHHHCCCCCCCHHHHCEEEEEECCCCCCHHEEHHHHHHHHHCCCEEEEEEEEEEEEECC
NARITGVYTKSKTYHTANVVICAGGISRHFLKSAGISTRVYFTHAEMLETPPVELQLKTI
CCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHCCCEEEEEEEEHHHHCCCCCEEEEEEE
VLPALTSRLNYEIATSTVECEKMWDEPGHEFVPFSLDPGAIQFKNNSIRIGQISRVLTDP
EHHHHHHHCCEEEECCEEEHHHHHCCCCCCEEEEECCCCEEEEECCCEEEHHHHHHHCCC
YAKVDPIQSEATMRVEIGKVLPALEDLPATWHHCLVAYSADDLPLIGAIPNLEGIHIFSG
CCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHEEEEECCCCCEEEECCCCCCCEEEEEC
FSSPFTLVPPLAKRFANYVAGENDQIIQQLSPSRFL
CCCCCEECCHHHHHHHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKRLMKNYDWIVVGGGITGAALSYELAKKGFTVLLLEKYSTLNNATRYSYASLPYWLGNT
CCCHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEHHHHCCCCCCCEECCCCEECCCH
DLIKQLVQEGKQRHHCLSEELEADTQFRELDLLLTIAPEDDPGKIATNFSKYNILPRLIS
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCEEECCHHHHHHHHHHH
VEEAFEMEPLLNKEAIAGAFTVSQGHVSPEAITLGYFQAFTRLGGQIEIIEVTGFVKTGD
HHHHHCCCCCCCHHHHCEEEEEECCCCCCHHEEHHHHHHHHHCCCEEEEEEEEEEEEECC
NARITGVYTKSKTYHTANVVICAGGISRHFLKSAGISTRVYFTHAEMLETPPVELQLKTI
CCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHCCCEEEEEEEEHHHHCCCCCEEEEEEE
VLPALTSRLNYEIATSTVECEKMWDEPGHEFVPFSLDPGAIQFKNNSIRIGQISRVLTDP
EHHHHHHHCCEEEECCEEEHHHHHCCCCCCEEEEECCCCEEEEECCCEEEHHHHHHHCCC
YAKVDPIQSEATMRVEIGKVLPALEDLPATWHHCLVAYSADDLPLIGAIPNLEGIHIFSG
CCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHEEEEECCCCCEEEECCCCCCCEEEEEC
FSSPFTLVPPLAKRFANYVAGENDQIIQQLSPSRFL
CCCCCEECCHHHHHHHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA