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The map label for this gene is 113475675

Identifier: 113475675

GI number: 113475675

Start: 3143842

End: 3144279

Strand: Reverse

Name: 113475675

Synonym: Tery_2015

Alternate gene names: NA

Gene position: 3144279-3143842 (Counterclockwise)

Preceding gene: 113475676

Following gene: 113475672

Centisome position: 40.57

GC content: 41.32

Gene sequence:

>438_bases
ATGATGTCAGTGATTCACAAGCATTTTCTGAACTTGAGAAATGGAGTAGATGGGGAAATAGCCCAAGTATCAGGAGATGG
AGCCTATGACAAGTATAAATGTTACCAGAAAGCTAACCAACTAGGAGCAAAAGTAACAATTCCACCCAGGAAAAATGCAG
TAATAGGTCAACACGGCAACTGCAAATGCCCACCTCATCCCAGAGATGAAAACCTCAGAAGAATCAGAAAGGTAGGACGC
CAAAAATGGAAGCATGAAAGTGGTTACCATCGGCGTTCTCTATCAGAAACCACAATGTTTAGACTCAAAGTGAGCTTTGG
AGGTCAGTTACGACGACGAAAATTCGAAAATCAAGCAGTAGAGTTGTTCATACAATGTGCCATGCTGAACCGTATGATTC
AAACAGGTAAACCCAAAAGTCACAAAGTGAAAATCTAG

Upstream 100 bases:

>100_bases
ACAAAAGTTCATGGTGTCAGTAAACGGCGTACATGGGGTAAATTACACCTAGGAGTAAATGAGGCTACAGGAGAGATTGT
CAGTGGAGTAGTGACTACCA

Downstream 100 bases:

>100_bases
TTAACTTCCTGATGGAAGTTTTTGGCGATCACTACTTTCATGCAACAAAGCCTAATCCTAATATTAGTAGGACTTACGCA
GTACAACCTATTTTCGTCAT

Product: IS4 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MMSVIHKHFLNLRNGVDGEIAQVSGDGAYDKYKCYQKANQLGAKVTIPPRKNAVIGQHGNCKCPPHPRDENLRRIRKVGR
QKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAVELFIQCAMLNRMIQTGKPKSHKVKI

Sequences:

>Translated_145_residues
MMSVIHKHFLNLRNGVDGEIAQVSGDGAYDKYKCYQKANQLGAKVTIPPRKNAVIGQHGNCKCPPHPRDENLRRIRKVGR
QKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAVELFIQCAMLNRMIQTGKPKSHKVKI
>Mature_145_residues
MMSVIHKHFLNLRNGVDGEIAQVSGDGAYDKYKCYQKANQLGAKVTIPPRKNAVIGQHGNCKCPPHPRDENLRRIRKVGR
QKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAVELFIQCAMLNRMIQTGKPKSHKVKI

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 16755; Mature: 16755

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSVIHKHFLNLRNGVDGEIAQVSGDGAYDKYKCYQKANQLGAKVTIPPRKNAVIGQHGN
CHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCEECCCCC
CKCPPHPRDENLRRIRKVGRQKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEEEEECCCCHHHHHHHHHHHH
ELFIQCAMLNRMIQTGKPKSHKVKI
HHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMSVIHKHFLNLRNGVDGEIAQVSGDGAYDKYKCYQKANQLGAKVTIPPRKNAVIGQHGN
CHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCEECCCCC
CKCPPHPRDENLRRIRKVGRQKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEEEEECCCCHHHHHHHHHHHH
ELFIQCAMLNRMIQTGKPKSHKVKI
HHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]