| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is cya1 [H]
Identifier: 113475649
GI number: 113475649
Start: 3097987
End: 3099918
Strand: Reverse
Name: cya1 [H]
Synonym: Tery_1986
Alternate gene names: 113475649
Gene position: 3099918-3097987 (Counterclockwise)
Preceding gene: 113475650
Following gene: 113475648
Centisome position: 40.0
GC content: 31.88
Gene sequence:
>1932_bases ATGGCTATTAAAATTATGGGACTTATACATTTTTGGCAATGCATCAATAAAAAAATTAACTCTCTAAGGATACCAATACC AGTAATTACCCTTTCTAGCTTTACTATCCTCGGTTTACTATTTTTCAGATACTTAGGAGTATTCCAACCACTAGAACTAG CAGTATTTGATTTGATGATGCGTTTGCGGTCAATGGAAGAGCCAGATCCTCGGCTTCTAATAGTAGAGATAACTGAAGAG GATATTCAGTCTTTACAGCAGTGGCCAATCTCCGATAAAACTTTGGCCAAAATTTTAGTATCTCTACAAAAGCATCAACC TAAAGTAATAGGTCTAGATATTTATCGAGATATTCCTTATCCGCCTGGTGAGTCAGAATTATTGGAACAATTGAAAAAAC CGAATATTTTTGCTATTACTTATCTTCACAGAGATCTTGATAAAACAGTATTGCCACCTCCCACAATACCAGAAGAAAGA ATTGGGTTTAATAATATTAATCTTGATCCGAATGGTGTAATTCGTCGTTATTTATTATTTACTTCTCATAAAAATAAAAC ATTCACAGCTTTTTCTTTAAAATTAGCTATTACTTACCTGAAAGATTATGGAATATTGCCGGTTGTCACTAAAAATAATG AATATAAATTAGGTGATGTATTATTTAAAGAATTAAAATCAAATTCAGGGGGATACCAAAGAATTGATGATACAGGATAT AAAATTTTAATAAATTATCGTAATTCTAAATCTGTTGCTCCCAAAGTTAGCATAACTAATGTTTTAAATAATAATTTTGA CCCTAAATTAGTCAAAAATAAAATTGTTTTGATTGGGACTACAGCTCCTAGTAGCAATGACTTATTTTGGACTCCTTATA GTTTTGGTAATTCAAAGTTTTTAAGAATGGCAGGAGTCGAGCTTTATGCACATATTACAAGTCAAATTATTAGTGCAGTT CTTGATGATAGAAAGCTATTTTCATACTGGAATGAATCAATAGAAATACTATGGATTATAGCTTGGTCAATTGTTGGTGC TAGTCTGACTAGGTATATCAGGAAACCTATGATTTGGATGTTAATAAATTTTCTGAGTTTTAGTATTTTAGGTGGTATTA GTTATGGTATTTTTATAAATATGCAGTGGATTCCTGTGGTAGCACCATTAGCAGGAATGGTTATTACAGGTGGGATAGTT ATAGTTTATAACATGCATGAATCATGGCAACAGAAAAATCTGGTGATGAAATTATTAGGTCAGCAAACTTCTCCAGAGAT TGCTAATGCTCTTTGGCAACAACGTTCAGAGTTGATTAATTCTGGAATTTTACCGGCAAAAACAGTTACAGCAACTATCT TATTTACTGACTTAAAAAATTTTAGCACTATCTCAGAAAAAAAAACATCGGAAGTTTTAATGATCTGGTTAAATCAATAT CTGAGTGCTATGACAGATATTGTGATTAATCATAATGGAATAGTCAATAAATTTACTGGAGATGGAATAATGGCAGTATT TGGTATACCAGTACCTAGTAATACTGTTGAAGAGATTGCTATGGATGCTCAAAATGCAGTTAACTGTGCTTTAGAAATGG AAGAATATTTGTTGAAGTTTAATTGTCAGTGGCAAAAACAGGGTGATCCAGAAATAAAAATGCGGGTAGGAATTTATACA GGAAGCATAATAGTTGGTAGTTTAGGAGGAAAAAATCGCTTAGAGTATGGAGTAATTGGTGATAGTGTTAATATTGCTTC CCGGTTAGAAAGTTTTGAGAAGGAATATCATCGAAGAATTTGTCGAGTTTTGATTGCTGAGGAAACTTTCAAATATCTAG ATGGAAAATTTAAAGTAGAATTTTGGGGTAATTTTTGTCTGAAAGGGAAGACAAAACCGATTAGTATATATTTGGTTAGT GGTAAAAAATAA
Upstream 100 bases:
>100_bases GAACCGGGGAGCTCTTGTTTAATGTTTGTAGTTCATAGCTATCTTAAAATCTGCTGTAAGTGTCGAGAACAACTATTTAA AACTGATTCCAAGAGGGTTA
Downstream 100 bases:
>100_bases TTTTTAAATTTGATAATTTCTTCTTAAATTGTCTGTTGAGTAACAAACTGATATTAATAAGCTAAAAATTAAATAAAAAG TTTTAAGTGTTTAGGGAAAA
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1 [H]
Number of amino acids: Translated: 643; Mature: 642
Protein sequence:
>643_residues MAIKIMGLIHFWQCINKKINSLRIPIPVITLSSFTILGLLFFRYLGVFQPLELAVFDLMMRLRSMEEPDPRLLIVEITEE DIQSLQQWPISDKTLAKILVSLQKHQPKVIGLDIYRDIPYPPGESELLEQLKKPNIFAITYLHRDLDKTVLPPPTIPEER IGFNNINLDPNGVIRRYLLFTSHKNKTFTAFSLKLAITYLKDYGILPVVTKNNEYKLGDVLFKELKSNSGGYQRIDDTGY KILINYRNSKSVAPKVSITNVLNNNFDPKLVKNKIVLIGTTAPSSNDLFWTPYSFGNSKFLRMAGVELYAHITSQIISAV LDDRKLFSYWNESIEILWIIAWSIVGASLTRYIRKPMIWMLINFLSFSILGGISYGIFINMQWIPVVAPLAGMVITGGIV IVYNMHESWQQKNLVMKLLGQQTSPEIANALWQQRSELINSGILPAKTVTATILFTDLKNFSTISEKKTSEVLMIWLNQY LSAMTDIVINHNGIVNKFTGDGIMAVFGIPVPSNTVEEIAMDAQNAVNCALEMEEYLLKFNCQWQKQGDPEIKMRVGIYT GSIIVGSLGGKNRLEYGVIGDSVNIASRLESFEKEYHRRICRVLIAEETFKYLDGKFKVEFWGNFCLKGKTKPISIYLVS GKK
Sequences:
>Translated_643_residues MAIKIMGLIHFWQCINKKINSLRIPIPVITLSSFTILGLLFFRYLGVFQPLELAVFDLMMRLRSMEEPDPRLLIVEITEE DIQSLQQWPISDKTLAKILVSLQKHQPKVIGLDIYRDIPYPPGESELLEQLKKPNIFAITYLHRDLDKTVLPPPTIPEER IGFNNINLDPNGVIRRYLLFTSHKNKTFTAFSLKLAITYLKDYGILPVVTKNNEYKLGDVLFKELKSNSGGYQRIDDTGY KILINYRNSKSVAPKVSITNVLNNNFDPKLVKNKIVLIGTTAPSSNDLFWTPYSFGNSKFLRMAGVELYAHITSQIISAV LDDRKLFSYWNESIEILWIIAWSIVGASLTRYIRKPMIWMLINFLSFSILGGISYGIFINMQWIPVVAPLAGMVITGGIV IVYNMHESWQQKNLVMKLLGQQTSPEIANALWQQRSELINSGILPAKTVTATILFTDLKNFSTISEKKTSEVLMIWLNQY LSAMTDIVINHNGIVNKFTGDGIMAVFGIPVPSNTVEEIAMDAQNAVNCALEMEEYLLKFNCQWQKQGDPEIKMRVGIYT GSIIVGSLGGKNRLEYGVIGDSVNIASRLESFEKEYHRRICRVLIAEETFKYLDGKFKVEFWGNFCLKGKTKPISIYLVS GKK >Mature_642_residues AIKIMGLIHFWQCINKKINSLRIPIPVITLSSFTILGLLFFRYLGVFQPLELAVFDLMMRLRSMEEPDPRLLIVEITEED IQSLQQWPISDKTLAKILVSLQKHQPKVIGLDIYRDIPYPPGESELLEQLKKPNIFAITYLHRDLDKTVLPPPTIPEERI GFNNINLDPNGVIRRYLLFTSHKNKTFTAFSLKLAITYLKDYGILPVVTKNNEYKLGDVLFKELKSNSGGYQRIDDTGYK ILINYRNSKSVAPKVSITNVLNNNFDPKLVKNKIVLIGTTAPSSNDLFWTPYSFGNSKFLRMAGVELYAHITSQIISAVL DDRKLFSYWNESIEILWIIAWSIVGASLTRYIRKPMIWMLINFLSFSILGGISYGIFINMQWIPVVAPLAGMVITGGIVI VYNMHESWQQKNLVMKLLGQQTSPEIANALWQQRSELINSGILPAKTVTATILFTDLKNFSTISEKKTSEVLMIWLNQYL SAMTDIVINHNGIVNKFTGDGIMAVFGIPVPSNTVEEIAMDAQNAVNCALEMEEYLLKFNCQWQKQGDPEIKMRVGIYTG SIIVGSLGGKNRLEYGVIGDSVNIASRLESFEKEYHRRICRVLIAEETFKYLDGKFKVEFWGNFCLKGKTKPISIYLVSG KK
Specific function: Plays essential roles in regulation of cellular metabolism by catalyzing the synthesis of a second messenger, cAMP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
Organism=Homo sapiens, GI10181096, Length=215, Percent_Identity=24.1860465116279, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI10947061, Length=215, Percent_Identity=23.2558139534884, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI167830411, Length=196, Percent_Identity=27.0408163265306, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI34486092, Length=219, Percent_Identity=22.8310502283105, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193206632, Length=231, Percent_Identity=30.3030303030303, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71989805, Length=227, Percent_Identity=25.5506607929515, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71989822, Length=235, Percent_Identity=25.1063829787234, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17568383, Length=164, Percent_Identity=28.6585365853659, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI212659371, Length=175, Percent_Identity=30.2857142857143, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17534659, Length=208, Percent_Identity=25.9615384615385, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI281366320, Length=214, Percent_Identity=26.6355140186916, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI161084260, Length=214, Percent_Identity=26.6355140186916, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585694, Length=214, Percent_Identity=24.7663551401869, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 73100; Mature: 72968
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKIMGLIHFWQCINKKINSLRIPIPVITLSSFTILGLLFFRYLGVFQPLELAVFDLMM CEEEEHHHHHHHHHHHHHHCCEECCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RLRSMEEPDPRLLIVEITEEDIQSLQQWPISDKTLAKILVSLQKHQPKVIGLDIYRDIPY HHHCCCCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCC PPGESELLEQLKKPNIFAITYLHRDLDKTVLPPPTIPEERIGFNNINLDPNGVIRRYLLF CCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHE TSHKNKTFTAFSLKLAITYLKDYGILPVVTKNNEYKLGDVLFKELKSNSGGYQRIDDTGY ECCCCCEEEEEEEEEEEEEHHCCCCEEEEECCCCEEHHHHHHHHHHCCCCCCEEECCCCC KILINYRNSKSVAPKVSITNVLNNNFDPKLVKNKIVLIGTTAPSSNDLFWTPYSFGNSKF EEEEEECCCCCCCCCEEEHHHHCCCCCCCEECCCEEEEEECCCCCCCEEECCCCCCCCCE LRMAGVELYAHITSQIISAVLDDRKLFSYWNESIEILWIIAWSIVGASLTRYIRKPMIWM EEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH LINFLSFSILGGISYGIFINMQWIPVVAPLAGMVITGGIVIVYNMHESWQQKNLVMKLLG HHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHEECCEEEEEECHHHHHHHHHHHHHHC QQTSPEIANALWQQRSELINSGILPAKTVTATILFTDLKNFSTISEKKTSEVLMIWLNQY CCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHH LSAMTDIVINHNGIVNKFTGDGIMAVFGIPVPSNTVEEIAMDAQNAVNCALEMEEYLLKF HHHHHHHEECCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE NCQWQKQGDPEIKMRVGIYTGSIIVGSLGGKNRLEYGVIGDSVNIASRLESFEKEYHRRI CCEECCCCCCCEEEEEEEEECCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH CRVLIAEETFKYLDGKFKVEFWGNFCLKGKTKPISIYLVSGKK HHHHHHHHHHHHCCCEEEEEEEECEEECCCCCEEEEEEEECCC >Mature Secondary Structure AIKIMGLIHFWQCINKKINSLRIPIPVITLSSFTILGLLFFRYLGVFQPLELAVFDLMM EEEEHHHHHHHHHHHHHHCCEECCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RLRSMEEPDPRLLIVEITEEDIQSLQQWPISDKTLAKILVSLQKHQPKVIGLDIYRDIPY HHHCCCCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCC PPGESELLEQLKKPNIFAITYLHRDLDKTVLPPPTIPEERIGFNNINLDPNGVIRRYLLF CCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHE TSHKNKTFTAFSLKLAITYLKDYGILPVVTKNNEYKLGDVLFKELKSNSGGYQRIDDTGY ECCCCCEEEEEEEEEEEEEHHCCCCEEEEECCCCEEHHHHHHHHHHCCCCCCEEECCCCC KILINYRNSKSVAPKVSITNVLNNNFDPKLVKNKIVLIGTTAPSSNDLFWTPYSFGNSKF EEEEEECCCCCCCCCEEEHHHHCCCCCCCEECCCEEEEEECCCCCCCEEECCCCCCCCCE LRMAGVELYAHITSQIISAVLDDRKLFSYWNESIEILWIIAWSIVGASLTRYIRKPMIWM EEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH LINFLSFSILGGISYGIFINMQWIPVVAPLAGMVITGGIVIVYNMHESWQQKNLVMKLLG HHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHEECCEEEEEECHHHHHHHHHHHHHHC QQTSPEIANALWQQRSELINSGILPAKTVTATILFTDLKNFSTISEKKTSEVLMIWLNQY CCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHH LSAMTDIVINHNGIVNKFTGDGIMAVFGIPVPSNTVEEIAMDAQNAVNCALEMEEYLLKF HHHHHHHEECCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE NCQWQKQGDPEIKMRVGIYTGSIIVGSLGGKNRLEYGVIGDSVNIASRLESFEKEYHRRI CCEECCCCCCCEEEEEEEEECCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH CRVLIAEETFKYLDGKFKVEFWGNFCLKGKTKPISIYLVSGKK HHHHHHHHHHHHCCCEEEEEEEECEEECCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430; 1970565 [H]