Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475533

Identifier: 113475533

GI number: 113475533

Start: 2851266

End: 2852183

Strand: Reverse

Name: 113475533

Synonym: Tery_1865

Alternate gene names: NA

Gene position: 2852183-2851266 (Counterclockwise)

Preceding gene: 113475538

Following gene: 113475532

Centisome position: 36.8

GC content: 37.58

Gene sequence:

>918_bases
ATGTTGCTTAAACAAAATCAATTCACAATTATATTTTGGGGCGTCAGAGGCAGTATTGCCTGCCCTGGTACAGAAACGGT
AAGATATGGAGGAAACACACCTTGTTTAGAAATGCGAGTTGGTGGACATCGCCTCATCTTTGATGGTGGTACTGGCCTAC
GAGTTTTAGGTCAGTCCCTTATATCTCACATGCCAGTAGATGCCCATATGTTATTTACTCATACACACTGGGATCATATT
CAAGGTTTTCCTTTTTTTGCACCTGCCTTTGTTAAAAATAATCGTTTCCACATATATGGACCAGTAGCTCCTAATGGAGC
TACTATTCAACAAAGACTTAATGACCAAATGCTTAACCCTAATTTTCCGGTCCCTCTGCAAATTATGGGTGCTGAACTAA
AATTTTTTGATCTGGAAACAGGTAGGTCAATCAAAATTGATGATGTACTTATAGAAAATGCTTTACTTAATCATCCAGGA
GAAGCCGTGGGATATCGTGTAAATTGGCAAGGTTATTCCGCTGCTTATGTTTCTGACACAGAACATTTTCCAGATCGCTT
GGATGAAAATGTTTTATTTTTGGCTCGTCATGCAGATGTTTTAATCTACGATGCAACCTATACAGATGAAGAATATTACT
CGAAAAAGTCTAGTAAAATAGGTTGGGGCCACTCCACTTGGCAGGAAGCTATAAAAATTGCTAAAACAGCTCAAGTCAAA
AAATTGGTTATTTTTCACCATGACCCCTTGCACAATGATGATTTTTTAGATAATGTAGGGGAGAAAGTAGCAGAAAAATT
TCCTAATAGTTTGATGGCAAGGGAAGGTCTGTCAATTCAATTAATTCCTCCGGATAATGATCAGGAAGAAAACTTAGAAG
TAAAGACCGTTGTAAAAGAACTTAAAATTTCTGCTTAA

Upstream 100 bases:

>100_bases
GGAATCTATATATTTATTCCCAAAGCAAAGCCATTTTAATTTGAGTAAAAAAAACTTGACTCATCTATGGTTTAACGGAA
TAAATTCTGGCATAAAATTC

Downstream 100 bases:

>100_bases
TTGAAATTTTGTAAGTAAACTAACAAAAAACTTATAAAAAATCAGATTAGATCTGGTAAAAGGTGAGTAAATTAATACAA
ATATAAAGTGTGTGGATAAC

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; GAF Domain/HD Domain Protein; Seceted Metal-Dependent Hydrolase; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MLLKQNQFTIIFWGVRGSIACPGTETVRYGGNTPCLEMRVGGHRLIFDGGTGLRVLGQSLISHMPVDAHMLFTHTHWDHI
QGFPFFAPAFVKNNRFHIYGPVAPNGATIQQRLNDQMLNPNFPVPLQIMGAELKFFDLETGRSIKIDDVLIENALLNHPG
EAVGYRVNWQGYSAAYVSDTEHFPDRLDENVLFLARHADVLIYDATYTDEEYYSKKSSKIGWGHSTWQEAIKIAKTAQVK
KLVIFHHDPLHNDDFLDNVGEKVAEKFPNSLMAREGLSIQLIPPDNDQEENLEVKTVVKELKISA

Sequences:

>Translated_305_residues
MLLKQNQFTIIFWGVRGSIACPGTETVRYGGNTPCLEMRVGGHRLIFDGGTGLRVLGQSLISHMPVDAHMLFTHTHWDHI
QGFPFFAPAFVKNNRFHIYGPVAPNGATIQQRLNDQMLNPNFPVPLQIMGAELKFFDLETGRSIKIDDVLIENALLNHPG
EAVGYRVNWQGYSAAYVSDTEHFPDRLDENVLFLARHADVLIYDATYTDEEYYSKKSSKIGWGHSTWQEAIKIAKTAQVK
KLVIFHHDPLHNDDFLDNVGEKVAEKFPNSLMAREGLSIQLIPPDNDQEENLEVKTVVKELKISA
>Mature_305_residues
MLLKQNQFTIIFWGVRGSIACPGTETVRYGGNTPCLEMRVGGHRLIFDGGTGLRVLGQSLISHMPVDAHMLFTHTHWDHI
QGFPFFAPAFVKNNRFHIYGPVAPNGATIQQRLNDQMLNPNFPVPLQIMGAELKFFDLETGRSIKIDDVLIENALLNHPG
EAVGYRVNWQGYSAAYVSDTEHFPDRLDENVLFLARHADVLIYDATYTDEEYYSKKSSKIGWGHSTWQEAIKIAKTAQVK
KLVIFHHDPLHNDDFLDNVGEKVAEKFPNSLMAREGLSIQLIPPDNDQEENLEVKTVVKELKISA

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34456; Mature: 34456

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKQNQFTIIFWGVRGSIACPGTETVRYGGNTPCLEMRVGGHRLIFDGGTGLRVLGQSL
CCEECCCEEEEEEECCCCEECCCCCEEEECCCCCEEEEEECCEEEEEECCCCHHHHHHHH
ISHMPVDAHMLFTHTHWDHIQGFPFFAPAFVKNNRFHIYGPVAPNGATIQQRLNDQMLNP
HHHCCCCEEEEEEECCHHHCCCCCCCCHHEECCCEEEEECCCCCCCHHHHHHHHHHCCCC
NFPVPLQIMGAELKFFDLETGRSIKIDDVLIENALLNHPGEAVGYRVNWQGYSAAYVSDT
CCCCCEEEECCEEEEEEECCCCEEEEHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCC
EHFPDRLDENVLFLARHADVLIYDATYTDEEYYSKKSSKIGWGHSTWQEAIKIAKTAQVK
HHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEE
KLVIFHHDPLHNDDFLDNVGEKVAEKFPNSLMAREGLSIQLIPPDNDQEENLEVKTVVKE
EEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH
LKISA
HHCCC
>Mature Secondary Structure
MLLKQNQFTIIFWGVRGSIACPGTETVRYGGNTPCLEMRVGGHRLIFDGGTGLRVLGQSL
CCEECCCEEEEEEECCCCEECCCCCEEEECCCCCEEEEEECCEEEEEECCCCHHHHHHHH
ISHMPVDAHMLFTHTHWDHIQGFPFFAPAFVKNNRFHIYGPVAPNGATIQQRLNDQMLNP
HHHCCCCEEEEEEECCHHHCCCCCCCCHHEECCCEEEEECCCCCCCHHHHHHHHHHCCCC
NFPVPLQIMGAELKFFDLETGRSIKIDDVLIENALLNHPGEAVGYRVNWQGYSAAYVSDT
CCCCCEEEECCEEEEEEECCCCEEEEHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCC
EHFPDRLDENVLFLARHADVLIYDATYTDEEYYSKKSSKIGWGHSTWQEAIKIAKTAQVK
HHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEE
KLVIFHHDPLHNDDFLDNVGEKVAEKFPNSLMAREGLSIQLIPPDNDQEENLEVKTVVKE
EEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH
LKISA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA