| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475519
Identifier: 113475519
GI number: 113475519
Start: 2835156
End: 2835689
Strand: Reverse
Name: 113475519
Synonym: Tery_1851
Alternate gene names: NA
Gene position: 2835689-2835156 (Counterclockwise)
Preceding gene: 113475520
Following gene: 113475517
Centisome position: 36.59
GC content: 31.27
Gene sequence:
>534_bases ATGATTGATGAATGTCATCTTCTATGGGGAGACATATTAGGTTATGCTTGGGGAAAAACAGATGAAAGAATAGAAATTGC AATTAAAAATGAAAAAGAAAGACAGACTTATTATGGAGCTTTAGACTATAAAACCAAGGAATTTCTTGTGCAAGAATATG AGAGTGGAAATACTAAAAATACTATTGAATTTATTAAATATTTGCAGAAGCAAAGACCGGGCAACAAATTGGCAATATTT TGGGATGGGGCAACTTACCATAACTCTCAAGAATTTCGAGAATATTTAATGACAATTAATCAATACTTATCAGAAGAAGA ATTGTTGATAAATTGTACAAGATTTGCTCCCAATGCTCCGGAGCAAAATCCTGTTGAAGATATTTGGTTACAAACCAAAA ATTTCAGTATTACTTTTTATCATCTTTGCAGTTCTTTTAAAGTAGTTAAGTGGCTATTTAAGTTTTTTGCGGATGGTCAA ATATTCAATTTCCCAAAACTTTTTCAGTATGAAATTTTGCCGCAACCTACTTAG
Upstream 100 bases:
>100_bases TGCTAAAAATGATTAATTAGTAGAAGTTAAAAGAAAAGAAATACAGGAATTTTTAGCTAAATGGCAACCAGAAATAGAAA CTGGAAAGCTTACAGTGTTT
Downstream 100 bases:
>100_bases GATTGCTATATTTCTTATTCTACATAATTAACTTTTTGCTAATTTATACCTCTGAAGTTTGAAGTTTAAGAAATTCAGTA TTAACACCAGACTCACGAGT
Product: transposase
Products: NA
Alternate protein names: Transposase Of
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ IFNFPKLFQYEILPQPT
Sequences:
>Translated_177_residues MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ IFNFPKLFQYEILPQPT >Mature_177_residues MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ IFNFPKLFQYEILPQPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21159; Mature: 21159
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKN CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEECCCCHHHHHHHHHCCCCCCH TIEFIKYLQKQRPGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAP HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCC EQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQIFNFPKLFQYEILPQPT CCCCHHHHEEECCCCCEEHHHHHCHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCC >Mature Secondary Structure MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKN CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEECCCCHHHHHHHHHCCCCCCH TIEFIKYLQKQRPGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAP HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCC EQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQIFNFPKLFQYEILPQPT CCCCHHHHEEECCCCCEEHHHHHCHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA