| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is ppnK [H]
Identifier: 113475442
GI number: 113475442
Start: 2693722
End: 2694651
Strand: Reverse
Name: ppnK [H]
Synonym: Tery_1770
Alternate gene names: 113475442
Gene position: 2694651-2693722 (Counterclockwise)
Preceding gene: 113475443
Following gene: 113475437
Centisome position: 34.77
GC content: 39.57
Gene sequence:
>930_bases ATGGATCTTAAACGAGTAATTATTGCTCATAAGGCTAGAGATGATATAAGCCGTCGTTATGCAGAACAATCTGCGAGAGA GTTGGAAAAGAGAGGATGTCGAGTCTTAATGGGCCCAAGTGGGCCACAAGATAATCCTTATCCAGTTTTTCTCGCTTCTA GCAATAATAAAATTGATTTGGCAGTAGTCTTAGGAGGAGATGGTACAATATTAGCTGCAGCTAGAAGTTTAGCACCGGAT GGAATTCCTATCTTAGCAGTTAATGTAGGAGGACATTTAGGCTTTTTAACCCATAATTTTGAAGATTTTCAGGATACAGA AAAAGTATGGGATAGGTTATTTGAAGACCGCTATGCATTACAACTAAGAATGATGTTGCAGTCAGCAGTATTTGATGGCG ATCGCTATAACCTCAAACCAGTCAGCGATAACTTTTTAGCCTTAAATGAGTTTTGCGTTAAACCTGCTTCTGCTGACAGA ATGCCTACTTCTATTTTAGAACTAGAAATTGATGGTGAGATAGTAGACCAATATCAAGGGGATGGATTAATTGTTGCAAG TCCCACAGGCTCCACTTGTTATACTGCCTCTGCTAATGGACCAATTATGCACTCTGGCATGGCTTCCATTTCCATAACAC CAATTTGCCCTCTAAGTCTTTCGAGCCGCCCTATTGTACTTCCTCCTGGTTGTGTAGTTAGTATTTGGCCTTTACATGAT CACGATCTAAGTACTAAACTCTGGGCAGATGGAGTTCTATGTACTTCTATATGGCCAGGAAAAAGAGTAAATGTGCGTAT GGCAAATTGTCAAGCTAAGTTTATTATTCTGCGGGAAAATTATTCATTTTTTCAGACTCTCAGAGAAAAACTACTATGGG CTGGTGCTAGAATTAAGTATCAAAACTACCATCGGAATAGTGAGAGCTGA
Upstream 100 bases:
>100_bases AGGCTCAGTAAGTTTTTTCCTGCCTAACAACCCAAATAAAAAAGCTATATAATAAAAATTTATACAGGAATTACCCTAAT TTATATTTCAAATCTAAACT
Downstream 100 bases:
>100_bases TCATCAACTCAAAAATTTACAAAATAGGTATTTTATGAAAATATAATATCGCGATCGCTATGCTATCAAAATAACTGAAG CTACCAAAATAATTCCTCCC
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase 2 [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MDLKRVIIAHKARDDISRRYAEQSARELEKRGCRVLMGPSGPQDNPYPVFLASSNNKIDLAVVLGGDGTILAAARSLAPD GIPILAVNVGGHLGFLTHNFEDFQDTEKVWDRLFEDRYALQLRMMLQSAVFDGDRYNLKPVSDNFLALNEFCVKPASADR MPTSILELEIDGEIVDQYQGDGLIVASPTGSTCYTASANGPIMHSGMASISITPICPLSLSSRPIVLPPGCVVSIWPLHD HDLSTKLWADGVLCTSIWPGKRVNVRMANCQAKFIILRENYSFFQTLREKLLWAGARIKYQNYHRNSES
Sequences:
>Translated_309_residues MDLKRVIIAHKARDDISRRYAEQSARELEKRGCRVLMGPSGPQDNPYPVFLASSNNKIDLAVVLGGDGTILAAARSLAPD GIPILAVNVGGHLGFLTHNFEDFQDTEKVWDRLFEDRYALQLRMMLQSAVFDGDRYNLKPVSDNFLALNEFCVKPASADR MPTSILELEIDGEIVDQYQGDGLIVASPTGSTCYTASANGPIMHSGMASISITPICPLSLSSRPIVLPPGCVVSIWPLHD HDLSTKLWADGVLCTSIWPGKRVNVRMANCQAKFIILRENYSFFQTLREKLLWAGARIKYQNYHRNSES >Mature_309_residues MDLKRVIIAHKARDDISRRYAEQSARELEKRGCRVLMGPSGPQDNPYPVFLASSNNKIDLAVVLGGDGTILAAARSLAPD GIPILAVNVGGHLGFLTHNFEDFQDTEKVWDRLFEDRYALQLRMMLQSAVFDGDRYNLKPVSDNFLALNEFCVKPASADR MPTSILELEIDGEIVDQYQGDGLIVASPTGSTCYTASANGPIMHSGMASISITPICPLSLSSRPIVLPPGCVVSIWPLHD HDLSTKLWADGVLCTSIWPGKRVNVRMANCQAKFIILRENYSFFQTLREKLLWAGARIKYQNYHRNSES
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Homo sapiens, GI55743112, Length=265, Percent_Identity=31.6981132075472, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1788968, Length=244, Percent_Identity=32.7868852459016, Blast_Score=112, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6320794, Length=187, Percent_Identity=36.8983957219251, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6322509, Length=180, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6325068, Length=180, Percent_Identity=34.4444444444444, Blast_Score=93, Evalue=5e-20, Organism=Drosophila melanogaster, GI161077047, Length=201, Percent_Identity=37.3134328358209, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI28573830, Length=201, Percent_Identity=37.3134328358209, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573828, Length=201, Percent_Identity=37.3134328358209, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573826, Length=201, Percent_Identity=37.3134328358209, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573832, Length=201, Percent_Identity=37.3134328358209, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24653422, Length=279, Percent_Identity=30.1075268817204, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI281363323, Length=279, Percent_Identity=30.1075268817204, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI20129957, Length=278, Percent_Identity=30.2158273381295, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI281363321, Length=279, Percent_Identity=30.1075268817204, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24653424, Length=279, Percent_Identity=30.1075268817204, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 34298; Mature: 34298
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKRVIIAHKARDDISRRYAEQSARELEKRGCRVLMGPSGPQDNPYPVFLASSNNKIDL CCCHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCEEEE AVVLGGDGTILAAARSLAPDGIPILAVNVGGHLGFLTHNFEDFQDTEKVWDRLFEDRYAL EEEECCCCEEEEEHHHCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH QLRMMLQSAVFDGDRYNLKPVSDNFLALNEFCVKPASADRMPTSILELEIDGEIVDQYQG HHHHHHHHHHCCCCCCEEEECCCCEEEEHHHHCCCCCCCCCCCEEEEEEECCCEECCCCC DGLIVASPTGSTCYTASANGPIMHSGMASISITPICPLSLSSRPIVLPPGCVVSIWPLHD CEEEEECCCCCEEEEECCCCCEEECCCCEEEECEECCCCCCCCCEEECCCCEEEEEECCC HDLSTKLWADGVLCTSIWPGKRVNVRMANCQAKFIILRENYSFFQTLREKLLWAGARIKY CCCCCCHHCCCEEEECCCCCCEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHCCCEEEE QNYHRNSES ECCCCCCCC >Mature Secondary Structure MDLKRVIIAHKARDDISRRYAEQSARELEKRGCRVLMGPSGPQDNPYPVFLASSNNKIDL CCCHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCEEEE AVVLGGDGTILAAARSLAPDGIPILAVNVGGHLGFLTHNFEDFQDTEKVWDRLFEDRYAL EEEECCCCEEEEEHHHCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH QLRMMLQSAVFDGDRYNLKPVSDNFLALNEFCVKPASADRMPTSILELEIDGEIVDQYQG HHHHHHHHHHCCCCCCEEEECCCCEEEEHHHHCCCCCCCCCCCEEEEEEECCCEECCCCC DGLIVASPTGSTCYTASANGPIMHSGMASISITPICPLSLSSRPIVLPPGCVVSIWPLHD CEEEEECCCCCEEEEECCCCCEEECCCCEEEECEECCCCCCCCCEEECCCCEEEEEECCC HDLSTKLWADGVLCTSIWPGKRVNVRMANCQAKFIILRENYSFFQTLREKLLWAGARIKY CCCCCCHHCCCEEEECCCCCCEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHCCCEEEE QNYHRNSES ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA