Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474680

Identifier: 113474680

GI number: 113474680

Start: 1364634

End: 1364843

Strand: Reverse

Name: 113474680

Synonym: Tery_0861

Alternate gene names: NA

Gene position: 1364843-1364634 (Counterclockwise)

Preceding gene: 113474681

Following gene: 113474679

Centisome position: 17.61

GC content: 32.38

Gene sequence:

>210_bases
ATGCCTTACAGTTTAGACTTCAGACAAAAAGTAATAAATTTTGTAGAAAATGGCGGTACAATTACCAAAGCAGCTCATAC
ATTTGGGATAGGAATAGCTTCGATATATAGATGGTTATTTCGCCCAAAATTGTCAGCAACTAAGGTAAAAAGTCGTCAAA
GAAAATTAGATTGGAAAGAATTAGAAAAAGATGTAAAACCAAATCCATAG

Upstream 100 bases:

>100_bases
ATTATATGGGAGAAATAATCATAGTTATAGTCGTTTTAATTAAGATTGAAACAAGAATTGGGTATAATAAAATTAAGTCA
ACTAGAAAACATTTTGAACT

Downstream 100 bases:

>100_bases
TCGCTCATTGTCAGACAGAGCTAAAAAATTTGGAGTTAATCAACCAGCTATATTTTATACTTTAAAAATAATGAATTTTC
CTTGAAAAAAGAAACCACTT

Product: transposase

Products: NA

Alternate protein names: Transposase Family Protein

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MPYSLDFRQKVINFVENGGTITKAAHTFGIGIASIYRWLFRPKLSATKVKSRQRKLDWKELEKDVKPNP

Sequences:

>Translated_69_residues
MPYSLDFRQKVINFVENGGTITKAAHTFGIGIASIYRWLFRPKLSATKVKSRQRKLDWKELEKDVKPNP
>Mature_68_residues
PYSLDFRQKVINFVENGGTITKAAHTFGIGIASIYRWLFRPKLSATKVKSRQRKLDWKELEKDVKPNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8021; Mature: 7890

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSLDFRQKVINFVENGGTITKAAHTFGIGIASIYRWLFRPKLSATKVKSRQRKLDWKE
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH
LEKDVKPNP
HHHCCCCCC
>Mature Secondary Structure 
PYSLDFRQKVINFVENGGTITKAAHTFGIGIASIYRWLFRPKLSATKVKSRQRKLDWKE
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH
LEKDVKPNP
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA