| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474558
Identifier: 113474558
GI number: 113474558
Start: 1152360
End: 1152722
Strand: Reverse
Name: 113474558
Synonym: Tery_0713
Alternate gene names: NA
Gene position: 1152722-1152360 (Counterclockwise)
Preceding gene: 113474559
Following gene: 113474557
Centisome position: 14.87
GC content: 34.99
Gene sequence:
>363_bases ATGTCACAACAGTCTTCTAAACAACCTATTCTTGAAATTACTGTCCAAGAGCTGGCAAGTCGCCTAATAAACGGTATTCC TGAAAATTTACAATTAGTTGATGTTCGGGAACGGCAAGAAATTGAAGTAGCTTTTATCAAAGGTTTTAAAGTTTTACCTT TAAGTGAATTTCATGAATGGTCAGAGAAAATTCATCTTCATTTGGACTCTAGCCAAGAAACTTTAGTTTTGTGCCATCAT GGGATCCGTTCAGCTCAAATGTGCCAATGGTTGAAAAATCAGGATTTTACAAATGTTAAAAATATTATTGGTGGTATAGA TGCGTACTCATCAGTAGTAGACCAAAGTATACCTCGTTATTAG
Upstream 100 bases:
>100_bases AAAGCACTATATCTTTACATATCAGAGTCGGGAGTAAGATTCGACTTTCTTTGATGTATATTTATACTACTAGTAAATTA ATAGATTCTTGCGTCTAAAA
Downstream 100 bases:
>100_bases CTATAGCTATATATAGATATAGTTAATTTATATACAGCAGAACTTACTCACCAAAATAAAAAGCCCTGGTTATAGTTTTT TTTGCTCTCACTCATTGATA
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Rhodanese Family Protein; Molybdopterin Biosynthesis MoeB Protein; Thiosulfate Sulfurtransferase GlpE; Molybdopterin-Synthase Sulfurylase; Rhodanese/MoeB/ThiF Domain Protein; Rhodanese-Like Domain-Containing Protein
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSQQSSKQPILEITVQELASRLINGIPENLQLVDVRERQEIEVAFIKGFKVLPLSEFHEWSEKIHLHLDSSQETLVLCHH GIRSAQMCQWLKNQDFTNVKNIIGGIDAYSSVVDQSIPRY
Sequences:
>Translated_120_residues MSQQSSKQPILEITVQELASRLINGIPENLQLVDVRERQEIEVAFIKGFKVLPLSEFHEWSEKIHLHLDSSQETLVLCHH GIRSAQMCQWLKNQDFTNVKNIIGGIDAYSSVVDQSIPRY >Mature_119_residues SQQSSKQPILEITVQELASRLINGIPENLQLVDVRERQEIEVAFIKGFKVLPLSEFHEWSEKIHLHLDSSQETLVLCHHG IRSAQMCQWLKNQDFTNVKNIIGGIDAYSSVVDQSIPRY
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13771; Mature: 13640
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQSSKQPILEITVQELASRLINGIPENLQLVDVRERQEIEVAFIKGFKVLPLSEFHEW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHEEHEECCCCCCCHHHHHHH SEKIHLHLDSSQETLVLCHHGIRSAQMCQWLKNQDFTNVKNIIGGIDAYSSVVDQSIPRY HHHEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQQSSKQPILEITVQELASRLINGIPENLQLVDVRERQEIEVAFIKGFKVLPLSEFHEW CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHEEHEECCCCCCCHHHHHHH SEKIHLHLDSSQETLVLCHHGIRSAQMCQWLKNQDFTNVKNIIGGIDAYSSVVDQSIPRY HHHEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA