Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474555

Identifier: 113474555

GI number: 113474555

Start: 1146046

End: 1147389

Strand: Reverse

Name: 113474555

Synonym: Tery_0709

Alternate gene names: NA

Gene position: 1147389-1146046 (Counterclockwise)

Preceding gene: 113474557

Following gene: 113474554

Centisome position: 14.8

GC content: 32.07

Gene sequence:

>1344_bases
GTGCAAAGAAATCGCGATAAACTATTAAATATAGTTAAGAGAGAAGTTCTGCAACTGCGATCGCAGTCTATACACCATGC
AGTAATAATTAATCTGGTTCGTCAGCAACCACCACAACAATTAAAACGTTCTTGGGAGCTAGAAGTAAAAGTAGGAAAGC
GCCCTATTTTTAAACTTCCTGAGCAAGTAAATATCATACAAGTTTTTGACCGTATGAAAGGAAAATTACTTATATTAGGA
AATCCTGGAGGTGGCAAAACTACAACTTTACTGGAATTAGCAAGAAGGCTTGTGATTAGGGCTGAAAAAGAACAAAACTT
ACCAATTCCAGTCTTATTAGATCTTTCCACATGGAAAAATCCTAATCATAAAATTTCAGATTGGTTAGTCTATCAACTTA
AGTTTAAATACAACATATCCTTGAAAGTTACTAGGGAATGGCTAGAAAATAAGCTAATATTACCTTTAATAGATGGGTTC
GATCAAGTATCCCCAGAATTATCTGAGTATTGCTTAGAAGAGATTAACAAATTATCAGTAGATTTTCAACCTAAACATTT
AGTTGTTTGTAGTAGTTTTGCAGCTTATAAAAATTGTTACAATAAGTTGAGAGTGAATGCTGCTGTTTTGTTACAACCTT
TAAAAAACAGTCATATTAAAGATTATTTATTGGCGTCTAGAAGTCGAGAACTTTGGGTATATATTCAGGATGAACCAGAG
TTATTGAACTTAGCTAAAATACCATTAATGTTAAGCATGATGACTTTAGCTTATGAGGAAATTTTAATTGCTGCTTGGAG
AAGAATTACTTCTAAACAGATAAGAGAAAAATATTTATTAAATGCTTATGTTCGTTTTCAATTAGGGGTAGAAAATAAGG
ATAAATGGTATTCTAGGGGTCAAGAACCACTGCCAGAACAAACAAGACGATGGTTGGCATGGTTAGCAAAACGAATGGCA
GCAGAAAATATTCAGGAATTTAGAATAAAAAAATTACAGCCAAGTTGGTTGGATACTAATGGCGAGTTACAAGCATATAA
GTTAATTGTTAATTTGATTAGTATATTATTTTGGGGGTTTACTTTTGGATTTATTTTTGGATATGTTTGGGAATTAAAGG
AAGGGTTAATTAGTGGTACTATTGGTGGCTTAATTGGTGGAAAGCTTGGTTTCCCAGGATTAAAAAAATTGGTGCTGCGA
ATTGTTTTATTTAATAATGGGCATATTCCTTGGAATTATCGTCGTTTTCTTAATTATGCTAGTAGTCAATTATTGTTACA
AAGAATAGGCGATCGCTATCAATTTATTCATTATTTATTGTATAAACATTTTACTGAAATATAG

Upstream 100 bases:

>100_bases
CTAATCTCAAACTAGGGGAGAGTAAAAATTAAGTTTTAAGTGCTTAATATTTTAACAATATAATAGCTAACTAAACCATT
TAAAATAGAGTTATACAAAG

Downstream 100 bases:

>100_bases
TTGGGAGGTCAAAAGGTCGAAAGCATTCACTATAGCTTTGGAAACGATACATTATCTTAAGCTTATAAAACTTTTTTCTG
ATATATCTAAATGTGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Transduction Protein With Nacht Domain Protein; NACHT Family-Like NTPase; Caspase Domain Protein; Protein Kinase; Transcriptional Regulator XRE Family; Protein Kinase Domain

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MQRNRDKLLNIVKREVLQLRSQSIHHAVIINLVRQQPPQQLKRSWELEVKVGKRPIFKLPEQVNIIQVFDRMKGKLLILG
NPGGGKTTTLLELARRLVIRAEKEQNLPIPVLLDLSTWKNPNHKISDWLVYQLKFKYNISLKVTREWLENKLILPLIDGF
DQVSPELSEYCLEEINKLSVDFQPKHLVVCSSFAAYKNCYNKLRVNAAVLLQPLKNSHIKDYLLASRSRELWVYIQDEPE
LLNLAKIPLMLSMMTLAYEEILIAAWRRITSKQIREKYLLNAYVRFQLGVENKDKWYSRGQEPLPEQTRRWLAWLAKRMA
AENIQEFRIKKLQPSWLDTNGELQAYKLIVNLISILFWGFTFGFIFGYVWELKEGLISGTIGGLIGGKLGFPGLKKLVLR
IVLFNNGHIPWNYRRFLNYASSQLLLQRIGDRYQFIHYLLYKHFTEI

Sequences:

>Translated_447_residues
MQRNRDKLLNIVKREVLQLRSQSIHHAVIINLVRQQPPQQLKRSWELEVKVGKRPIFKLPEQVNIIQVFDRMKGKLLILG
NPGGGKTTTLLELARRLVIRAEKEQNLPIPVLLDLSTWKNPNHKISDWLVYQLKFKYNISLKVTREWLENKLILPLIDGF
DQVSPELSEYCLEEINKLSVDFQPKHLVVCSSFAAYKNCYNKLRVNAAVLLQPLKNSHIKDYLLASRSRELWVYIQDEPE
LLNLAKIPLMLSMMTLAYEEILIAAWRRITSKQIREKYLLNAYVRFQLGVENKDKWYSRGQEPLPEQTRRWLAWLAKRMA
AENIQEFRIKKLQPSWLDTNGELQAYKLIVNLISILFWGFTFGFIFGYVWELKEGLISGTIGGLIGGKLGFPGLKKLVLR
IVLFNNGHIPWNYRRFLNYASSQLLLQRIGDRYQFIHYLLYKHFTEI
>Mature_447_residues
MQRNRDKLLNIVKREVLQLRSQSIHHAVIINLVRQQPPQQLKRSWELEVKVGKRPIFKLPEQVNIIQVFDRMKGKLLILG
NPGGGKTTTLLELARRLVIRAEKEQNLPIPVLLDLSTWKNPNHKISDWLVYQLKFKYNISLKVTREWLENKLILPLIDGF
DQVSPELSEYCLEEINKLSVDFQPKHLVVCSSFAAYKNCYNKLRVNAAVLLQPLKNSHIKDYLLASRSRELWVYIQDEPE
LLNLAKIPLMLSMMTLAYEEILIAAWRRITSKQIREKYLLNAYVRFQLGVENKDKWYSRGQEPLPEQTRRWLAWLAKRMA
AENIQEFRIKKLQPSWLDTNGELQAYKLIVNLISILFWGFTFGFIFGYVWELKEGLISGTIGGLIGGKLGFPGLKKLVLR
IVLFNNGHIPWNYRRFLNYASSQLLLQRIGDRYQFIHYLLYKHFTEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52526; Mature: 52526

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRNRDKLLNIVKREVLQLRSQSIHHAVIINLVRQQPPQQLKRSWELEVKVGKRPIFKLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCCHHHCC
EQVNIIQVFDRMKGKLLILGNPGGGKTTTLLELARRLVIRAEKEQNLPIPVLLDLSTWKN
CHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
PNHKISDWLVYQLKFKYNISLKVTREWLENKLILPLIDGFDQVSPELSEYCLEEINKLSV
CCCCCCCEEEEEEEEEEEEEEEEEHHHHHCCEEEHHHCCCHHCCHHHHHHHHHHHHHCCC
DFQPKHLVVCSSFAAYKNCYNKLRVNAAVLLQPLKNSHIKDYLLASRSRELWVYIQDEPE
CCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCC
LLNLAKIPLMLSMMTLAYEEILIAAWRRITSKQIREKYLLNAYVRFQLGVENKDKWYSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCC
QEPLPEQTRRWLAWLAKRMAAENIQEFRIKKLQPSWLDTNGELQAYKLIVNLISILFWGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TFGFIFGYVWELKEGLISGTIGGLIGGKLGFPGLKKLVLRIVLFNNGHIPWNYRRFLNYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SSQLLLQRIGDRYQFIHYLLYKHFTEI
HHHHHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRNRDKLLNIVKREVLQLRSQSIHHAVIINLVRQQPPQQLKRSWELEVKVGKRPIFKLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCCHHHCC
EQVNIIQVFDRMKGKLLILGNPGGGKTTTLLELARRLVIRAEKEQNLPIPVLLDLSTWKN
CHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
PNHKISDWLVYQLKFKYNISLKVTREWLENKLILPLIDGFDQVSPELSEYCLEEINKLSV
CCCCCCCEEEEEEEEEEEEEEEEEHHHHHCCEEEHHHCCCHHCCHHHHHHHHHHHHHCCC
DFQPKHLVVCSSFAAYKNCYNKLRVNAAVLLQPLKNSHIKDYLLASRSRELWVYIQDEPE
CCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCC
LLNLAKIPLMLSMMTLAYEEILIAAWRRITSKQIREKYLLNAYVRFQLGVENKDKWYSRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCC
QEPLPEQTRRWLAWLAKRMAAENIQEFRIKKLQPSWLDTNGELQAYKLIVNLISILFWGF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TFGFIFGYVWELKEGLISGTIGGLIGGKLGFPGLKKLVLRIVLFNNGHIPWNYRRFLNYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SSQLLLQRIGDRYQFIHYLLYKHFTEI
HHHHHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA