Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is cyaD [H]
Identifier: 113474477
GI number: 113474477
Start: 1012706
End: 1013788
Strand: Reverse
Name: cyaD [H]
Synonym: Tery_0623
Alternate gene names: 113474477
Gene position: 1013788-1012706 (Counterclockwise)
Preceding gene: 113474481
Following gene: 113474476
Centisome position: 13.08
GC content: 37.12
Gene sequence:
>1083_bases ATGTTTAATAATTTTGATTCTACAGAAGTACAACCCTTAGAAAGTGATGAATTTCTCCCTCCTATGAGTCGTTGGAATAA GATAGGTGGAATGTTCTTATTGGGTACATTTGGTGCAGCTATTGCCCTAATTAGCCTAGTAAAGTATAACCCTACTGTGA GAACAGAAGCTATTGCTCGACCAATAGGAGACGTAAGAATTGTTCAAGCACCTACAGAGGGTAAAATTGACAGTATAGAA GTAAATGAAAACCAAGTAGTTCATGAAGGAGATGCGATCGCACGCATAGATGAATCTGCTCTGAGTCGTCAAAAAACTCA ACTACAAGAAAAAATCCAACAGTGCGACATAGAATTAGAGCAAATTAATCAACAAATATCTGCTTTAGAGGTTCAAATCT TAGCTACTGCTAGACCTCAAACTTTTCAGTATCAGTCACAATTTACCATAGCAGAAAATAATAAGATAGATAAATCATCT ATTGAGTCAGCTATTTTAGAGCTATCCTTATCTTTGCCTAAAGTTGCTCAACAGTTTGCTAAAGATAGACGGGACCTGAT AGTTAAGCGAACCGAATTAATTAAAGAATTGACTGCTGGTAACAGAGAACTAGAACAGGTAAATGCTAAACTTAATAATA GTGTAATCATTGCTCCTGCAAATGGTACTATATTTAAGTTATCTTTGCGTAATCCTGGGCAAACTGTCGAATCAGGAGCA GCGATCGCTCAGATAGTCCCTAACAACGCGCATATAGTATTTAAGGCTAGGGTGACAGCAGCAGATATTGCCAAAGTAAA AATAGGTCAACCCGTACAAATTCGAGTTTCAGCTTATCCTTTTCCTGATTATGGTATTCTCAAAGGAACTGTACGTTCAA TTTCTCCAGATGCTATCGCTCATCAAGTACTTAAAGAAGCTTATTATGAGGTCACTATAGAACCTGAAAAACCTTACTTA GTCAAAGGCGGTAGTCAATATCTGATTCAACCAGGAATGGAAGGTCGAGCTGATATTATTTCTTCCCAAGAGACCGTGCT AACTTTTGTTCTCAGAAAACTTAGATTGTTAACTGATTTTTAG
Upstream 100 bases:
>100_bases AATATTAAATATGTGTCAGTCTAGTAAGTAACTATCTAAACTTAATATTCATCTCTCAATTTAGCCTCAAAAAAATTATT TTAGTAAGTAAAAATAAATT
Downstream 100 bases:
>100_bases TGATTATACCAAATATATATAGCAATTAAGAAAAATTGGGAAAACACCATATAAACGTTTAATCAAACAATGGTTAAGAT CCTGGGTTTTTGATAACAAA
Product: secretion protein HlyD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MFNNFDSTEVQPLESDEFLPPMSRWNKIGGMFLLGTFGAAIALISLVKYNPTVRTEAIARPIGDVRIVQAPTEGKIDSIE VNENQVVHEGDAIARIDESALSRQKTQLQEKIQQCDIELEQINQQISALEVQILATARPQTFQYQSQFTIAENNKIDKSS IESAILELSLSLPKVAQQFAKDRRDLIVKRTELIKELTAGNRELEQVNAKLNNSVIIAPANGTIFKLSLRNPGQTVESGA AIAQIVPNNAHIVFKARVTAADIAKVKIGQPVQIRVSAYPFPDYGILKGTVRSISPDAIAHQVLKEAYYEVTIEPEKPYL VKGGSQYLIQPGMEGRADIISSQETVLTFVLRKLRLLTDF
Sequences:
>Translated_360_residues MFNNFDSTEVQPLESDEFLPPMSRWNKIGGMFLLGTFGAAIALISLVKYNPTVRTEAIARPIGDVRIVQAPTEGKIDSIE VNENQVVHEGDAIARIDESALSRQKTQLQEKIQQCDIELEQINQQISALEVQILATARPQTFQYQSQFTIAENNKIDKSS IESAILELSLSLPKVAQQFAKDRRDLIVKRTELIKELTAGNRELEQVNAKLNNSVIIAPANGTIFKLSLRNPGQTVESGA AIAQIVPNNAHIVFKARVTAADIAKVKIGQPVQIRVSAYPFPDYGILKGTVRSISPDAIAHQVLKEAYYEVTIEPEKPYL VKGGSQYLIQPGMEGRADIISSQETVLTFVLRKLRLLTDF >Mature_360_residues MFNNFDSTEVQPLESDEFLPPMSRWNKIGGMFLLGTFGAAIALISLVKYNPTVRTEAIARPIGDVRIVQAPTEGKIDSIE VNENQVVHEGDAIARIDESALSRQKTQLQEKIQQCDIELEQINQQISALEVQILATARPQTFQYQSQFTIAENNKIDKSS IESAILELSLSLPKVAQQFAKDRRDLIVKRTELIKELTAGNRELEQVNAKLNNSVIIAPANGTIFKLSLRNPGQTVESGA AIAQIVPNNAHIVFKARVTAADIAKVKIGQPVQIRVSAYPFPDYGILKGTVRSISPDAIAHQVLKEAYYEVTIEPEKPYL VKGGSQYLIQPGMEGRADIISSQETVLTFVLRKLRLLTDF
Specific function: CyaD is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 39894; Mature: 39894
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNNFDSTEVQPLESDEFLPPMSRWNKIGGMFLLGTFGAAIALISLVKYNPTVRTEAIAR CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHC PIGDVRIVQAPTEGKIDSIEVNENQVVHEGDAIARIDESALSRQKTQLQEKIQQCDIELE CCCCEEEEECCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QINQQISALEVQILATARPQTFQYQSQFTIAENNKIDKSSIESAILELSLSLPKVAQQFA HHHHHHHHHEEEEEEECCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHH KDRRDLIVKRTELIKELTAGNRELEQVNAKLNNSVIIAPANGTIFKLSLRNPGQTVESGA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCHHCCC AIAQIVPNNAHIVFKARVTAADIAKVKIGQPVQIRVSAYPFPDYGILKGTVRSISPDAIA EEEEECCCCCEEEEEEEECHHHHHEEECCCCEEEEEEECCCCCCCHHHHHHHCCCHHHHH HQVLKEAYYEVTIEPEKPYLVKGGSQYLIQPGMEGRADIISSQETVLTFVLRKLRLLTDF HHHHHHHHEEEEECCCCCEEEECCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFNNFDSTEVQPLESDEFLPPMSRWNKIGGMFLLGTFGAAIALISLVKYNPTVRTEAIAR CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHC PIGDVRIVQAPTEGKIDSIEVNENQVVHEGDAIARIDESALSRQKTQLQEKIQQCDIELE CCCCEEEEECCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QINQQISALEVQILATARPQTFQYQSQFTIAENNKIDKSSIESAILELSLSLPKVAQQFA HHHHHHHHHEEEEEEECCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHH KDRRDLIVKRTELIKELTAGNRELEQVNAKLNNSVIIAPANGTIFKLSLRNPGQTVESGA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCHHCCC AIAQIVPNNAHIVFKARVTAADIAKVKIGQPVQIRVSAYPFPDYGILKGTVRSISPDAIA EEEEECCCCCEEEEEEEECHHHHHEEECCCCEEEEEEECCCCCCCHHHHHHHCCCHHHHH HQVLKEAYYEVTIEPEKPYLVKGGSQYLIQPGMEGRADIISSQETVLTFVLRKLRLLTDF HHHHHHHHEEEEECCCCCEEEECCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]