Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113474299
Identifier: 113474299
GI number: 113474299
Start: 677883
End: 678125
Strand: Direct
Name: 113474299
Synonym: Tery_0427
Alternate gene names: NA
Gene position: 677883-678125 (Clockwise)
Preceding gene: 113474295
Following gene: 113474302
Centisome position: 8.75
GC content: 47.74
Gene sequence:
>243_bases TTGACCCCCTGGCTTATTGCCCTACATCCCACAGCTACCTTTGGGATGGTTCCCGGTTACGGGAGTTTTCTTACCTTCCT GTTCGTCCACTTGTCAATCTCTGCTAGAAGTCTCACTCTTTTGGTAGTTAAAGCTTTGACCCCATTTAGGCCAGCTTCAG GGATTGATGTTCAGTCTCTACCCTGTGGCCTACGCTGTCAACCTAACAACAAGGCGGATGGAATTTCACCATCAAGATCA TAA
Upstream 100 bases:
>100_bases CTCGTTCCCTTATGCCTTTATTGCGACTGATTTAGCGGGGTAAACTCTCCCGGAGGGTTCTGTCTGATTGTTGATAATAT CAAATTAATAATATTACCCA
Downstream 100 bases:
>100_bases GAGTTATCCATTAGTCGAGGTTTCCCTCACTTGTTGACTAAGGACGGCCATTTATATCTAGTTTCCTAGCTTAGTGGCCA ACGAGTCGCACTAATTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MTPWLIALHPTATFGMVPGYGSFLTFLFVHLSISARSLTLLVVKALTPFRPASGIDVQSLPCGLRCQPNNKADGISPSRS
Sequences:
>Translated_80_residues MTPWLIALHPTATFGMVPGYGSFLTFLFVHLSISARSLTLLVVKALTPFRPASGIDVQSLPCGLRCQPNNKADGISPSRS >Mature_79_residues TPWLIALHPTATFGMVPGYGSFLTFLFVHLSISARSLTLLVVKALTPFRPASGIDVQSLPCGLRCQPNNKADGISPSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8571; Mature: 8440
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPWLIALHPTATFGMVPGYGSFLTFLFVHLSISARSLTLLVVKALTPFRPASGIDVQSL CCCEEEEECCCCEECCCCCHHHHHHHHHHHHCCCCCHHEEHEEECCCCCCCCCCCCCCCC PCGLRCQPNNKADGISPSRS CCCCEECCCCCCCCCCCCCC >Mature Secondary Structure TPWLIALHPTATFGMVPGYGSFLTFLFVHLSISARSLTLLVVKALTPFRPASGIDVQSL CCEEEEECCCCEECCCCCHHHHHHHHHHHHCCCCCHHEEHEEECCCCCCCCCCCCCCCC PCGLRCQPNNKADGISPSRS CCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA