Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113474297
Identifier: 113474297
GI number: 113474297
Start: 669642
End: 675599
Strand: Reverse
Name: 113474297
Synonym: Tery_0425
Alternate gene names: NA
Gene position: 675599-669642 (Counterclockwise)
Preceding gene: 113474298
Following gene: 113474296
Centisome position: 8.72
GC content: 37.4
Gene sequence:
>5958_bases GTGGAGTGTTGTTTGCTTATTGACGAAGCAGCAGTCACAATAGTTGCCGGGAATATTCGAAGATGTTTACCTGAAGGTGC TTTAGTACATACAGCTTCAGGGTTGGTAGCTATTGAAAAAATTCGGATTGGCGATCGCGTATTAACGAGCCAAGGATTTT ATCCTGTGACCAACTTCTTTGACCAGGGTATTCAGTCTTTATGTCGTATTCAAACAGAAGATGGATATTTTGAATGTACT CCTGATCATAAAGTTGCTGTGCTACAAGATTTGTATGGTAACTATAAAATGATTAAGGCTAAAGACTTACAAGAAGGCGA TCGCCTAATTTTTGTCCCTCAAGCAATACCGGGTACTCCCACTGAACTACCTGAGTTAAAAGCTGTTCCATCATCTGAGG CCAAACTCATAACGATACCCGCTCTACAGAGCGAAGTTGCTTATTTTCTAGGATACTTGTCTGGAAATGGATCGGTTGGT TCTGATGGAGGGCAAGTTAGGTTTCGAGTTTCCCAAGATAGTCCGGAAATTCTGGAGCGACTGATTAATGTTGCTCAAGA GTTTGGTTTGGAAACACATAGACTGAGAACGCTGGAACAATTTCAAACTCAAGCTTATGAACTTGAGTTAAATAGCAGCA CTCTTAACAAATATCTGTCACAGTTTAAACAGCCATCTAACTCTGTTTGTATTCCTGAGTGTATTCTGATGGGAACAACA GAAATTCGTCAAGCTTATTTGGCAGGTTTAGTAGACGCAGATGGTTGTCATTCTCAGGGTATACTTTTAACTTCAGTTGA CCAAGGCTTTCTGCGACAGGTGCAAGCATTATATGCATCTTTAGGAATCACTACAAGATTGTGTGGTTCGGTGCAAAAGC CAACTGGAACATGGGAAGGTGAGTTGGTAACTGTAAGTGAGGGTGGTTATGAAGCAGTAGAAAAACTGATGATGAATTAC TCGACTCAGTTCCCAGTGCAAAAACCGAACCACCTTAAGTTTTTCCCAGACCAGGGGTTTCCAAAGGAAATGGTTAGACC TTTAGTAAAGACTTCTCAAGATCATTTGGGCAAAGTTCACAAGCAGATGATTTTTCCTTCTGTGAAAAAGTTTGTGGTTG ATGCGACAGATTTAATTCCGGTGAAGGTGAAAAAGGTTGAGATGGATGTGAGGGAAGCATCAACTTATGATATTGAAGTT GCCAGTATTCATGAGTTTGTTTGCCAGGGAATTTTAGTTTCAAATTCAGCAGGTATCAGGCAGGGGAGTAATAGCGATCA TATCTTTACTGTAGCGAAGGATAATCTCTGGCGACAAGATGAAAATGGTAACTGGGGTATCGATCCTAAAAGAGATGCTC TGCGAATGGCAAATCATACTCATGTTTTCCACTACAAACCAACATTAGAAGAATGTGTAGAGGCAGTGAGAAAACAGTTT TATTCTGGTGAAGGCGCCATTCAGTGGGCAGGTGAAGCGGTTGCTCGTGCTAATCGTGATCTACTTTTTACTCCAGAAAT AAAGAGTGATTTCTTGAAAGCGTATGAAAAAAATAATGCTAAAAAGTGGTTTCAAGAACACTATCCAAATATTACTAATG ATGAACTGGAACATCGGTTAGCGAGATTAGGACTTAACCCTTGTCATTCAGGGGATACTTTAGTATCTACAGACCAAGGT TTAATTGCAATTCAGGATTTAGTAGGTAAACAATTTCAAGCATTGGTAGATTTGCGTTCTATAGGTTTATCTGGTGTCAG GTTAACAGATGCGATCGCTTTTGCTACGGGAGTTAAAACTACCTACCAAGTTATTCTGAATAATGGAATGCAAATGCGAT GTACTGGAGACCATCAACATTTTACTAGTCGAGGTTGGGTTAGTACTAGAGATTTAACTGATGATGACAATATTTATATT CAAGGAGGAGCGGGTCAATTTGGCAAAGGTACTATTTCTGTTGCTCAAGCTCAAATGCTTGGTTGGTGGTACAGGGATGG ATATAATGTTAAGATAAAAGCTCGTAGTCATAGTCATGGCGGGAAGCAAGATTATTTTGCTACAGGGTTTGTTTTTGACC AGGATGACTATGAAACTGCCTACAATGTTGTTGAAAAAGCAGTTGCATCAATTACAGAAAGAGAATATGTAACTAAACTA CATAAAGGAGTCTATGAATTCCCAACCCAATATCCTAAATTAGAAAAGTTTTTTGCTGATTTAGGTATAGTTGGAAAAGA AGAACTTCCTAATAATTTTCTTAGTCAATCTCAGGAAGTTTTAATTGGTTTTTTACAAGGAATTTTTAGTGCAGATGGCA TAGTATATGAAGATTCAAGAAGAATCAAACTAACTATGGTTTCGGAAAAACTTCTCCAACAAATTCAATTAATTCTCTCT AATTTAGGAATTATTAGTACAGTTGGATTAGTTAGGGAAAAAGATTACATAGGTGTACCTTATAGGACTGTTAATGTAAC TCATGAAGTTAGTTTATGCCGGGGTAGTTATGAACTATTGATTTCTAGTTTTAGCTTCAGTTTATTTCAACAATTAATTG GCTTTCCGCTATCGCCAAGTAAAAATGTTAAGGCTGAAAAATTGCTAGTACAAACGTTAGCTAATTATTCTGAGTCAACT ATTAATTCTAAGTTCATATCAAAGGTGAAAAAAGTTGAAGAATTTGGAGAGGAAGTTGTTTATGATTTACATGTTCCTTT AACTAATTCTTTTATCGCTAATGGTTGTTTAACTCACAATTGCGGAGAAATTATTGGTTCAAATTTTCACTGTGTGAGCG GAGATACTCTATTAATTACTCGCGATAGTATTCACAAAATAAAAGATGTTGTTGGTCAAAAAATTGAAATTTGGAACGGC AAAAATTGGAGTCAAGTAATTCCTTTGAAAACAGGAAAAGACAGAAAATTATACCGGGTCAGATTTGGGGATGGTTCCTA TCTTGATGTGACAGAATATCACAGATTTTTTGTGAAAGATCGGTTTGGTAAAAAGTATGAAGAAGTACAAACAAAGGATT TGCTAACTCATAGCAAATATGCTTTAGATGTGGAACCTTTTATCATAGATTATCATGATGGAGATTCTATCAATTTATCT TATGCTTATACATTGGGTGCGGCTCTAGGTAATGGAACCATAGACCAAAATAGTAATGGTAAAATTCGGGTTTATTCTCA CAAAGCTGAATTAATTTTTGCTGGTAATAAATCACTGGAACGACAATATAATTATCTACCTTCTTTTGTGGATGTTATAG ATTTAGGGTTTTCTGGAGAACTACTGCGTCGTCTACAAACTGAACCTGATGCTTTAAATACTATTGCTAGTTGGAATAAA TCCGCTATTCTTGCTTTTATCGCAGGATTAGCAGATACAGATGGTTCTGAGACTAAAGGTAATGGAATTAAAATTTCTGT ATCTGATTATGAACGAGCAAAAAGACTGCAATTATTGTTGACAAAATGTGGTATTCGTGCATCAGTCAATTTAATGGCAA GTCGCGGTTGTACTACAAATTTAGGAGAAAGAAATCAAGACCTTTACTATTTACAAATTACTGATTGTAGAGAAATTCCT TGTCAAAGACTAGATACAACTAAGGTGTGTGAAGCTAAATTTCAAGGTAAATATCAAACAATTCAAAATGTTGAAGAATT ACCAGGATTACATGACACTTATTGTTTTGAAGAGCCGGAATTTCATAAAGGTGTTTTTGGCAATGCCTTGACAGGAAATT GTAATTTATCGGAAATTCATCTCAATCAAATTGAACCAAATAACTATAAAGAACAGGAGGAAGCTTTTACTGCTGGTGCC CTTTCTGTGGCAACTCTACTTAAGCATGAGTTCCTTGAACCTCGCTATCGTTATAGTCGAGAATTAGACCCTATTGTAGG AGTATCTTTTACTGGTTTATTTGACTTTTTTGTAAAAGCTTTTGGCATTGAATGGTTGCGTTGGTGGCAAGCAGGTCGCC CGGCAACAGCTCAAGGTCTGGAGTTTAAACAACAGGAGGCAAAATATTTAACTCGTTGGCGGGAAATAGTGCATCGGGTG GTGTGGGATTATTGCGATCGTCATAACCTTAAGCGTCCCAACCGTTGTACAACAGTTCAACCTTCCGGTTGTCTTGACAA AACAGCATTGAGAATATTTAACCAAGGTTTGCTCTATGCAGATGAAGTCGTCACACCTGGCAGTGGAGAAACAGTAGGAT TAGGATTAACTGTTCGTAATGGTATTGGAGCTTCGACAGCGATCGCTAATCAACCAATGGAACTGGTAGAAATAAAACTG GCTAATGGCCGGAAATTACGCATGACTCCAAATCATCGGATGAGTGTCAAGGGTAAGTGGATACATGCTTGTAATCTTAA GCCAGGAATGTTGCTTGATTACAGTATTGGTGAATATCAAAAACGAGAAGATACTTTACTAATACCTTTACAGTTGGAAG ATTATACAGAGGTTAACAACTCTCAAACTTTAGGTCATAACGGTGGTGTCTTGACAAAAAAAATCATGACTCCTGCAAGT ATGACTTCAGACTTAGCTTACTTTTTAGGTTGTTTATTCGGCAATGGTTGCATTGTTCAAAACAAATATCAAGTTTGTTT TTATCATAGCAGACTTGATGTTTTGTATGGTCTCCAAGAAAAAGGCAAAAAATTATTTGGTATTAAAGGCAGTTTAAATG ACTTTGCTAACGGTCGTTTTGAATTATGCTTTGCTTCTCGACAGTTATTCTACTGGCTGCACTTAAACCAGCTTGTCAAA ACACAGAAAAGTGAAGATTTAGAACGAATACCTCTGAGTTTACGTCGCTCTTCACGAGTTACTTTGCTATCATTTTTCTG TGGTCTGATAGATACTAATGGATATGTTCCTCAGGATGGAAAACTATCCATAGCTTCAGCTAGCTCTGATTTTATTCACA ACCTGCAACAAATAGGGGAATCTATCGGACTGTGTTTTAGTATATATCAGAATACTAAAGGGGAGAACTTACAAAATCAA CACAATAATACATGGGGATTATGTTTGAGTCCTATGTTGTCTAATGTTGATGCTTTAGATTATCTCAACCATAACAGTAT CAAATGTCAGGAAGGACCTGTAGTTATATCTAAGTGTGTGTTGAATTATTCACCATACAAAATTGAGTCTGTTAATATTG GTGCAGTGTGTGATTATTCTTATGATTTTGCCATTGAAGGTATAAATGATAATGACTCTTGGTATTGGCAAGGTGCTTTG AAATCACATAACACCAAGTCTCTGTTAACAAATGCTTCCCCTGGTTGGCATCCTCCTTTTGGGTTACGCTGGGTGCGACG GATTACTTTTGCGAAAAATGATCCCGTAGCATTAGCTTGTCTTGACTATGGTTATTCTGTAATTCCTGGGCAGTCAGGCA AAGATGAAAATGGAAATTTACTTAACGATCCTTTTGACGAACGGGCTAAAGAATGGTTAGTAGAAATTCCAGTACAGGTA TCTTGGATAGATTTGCCTGGGGTTGAAGAGATTGCTATTGAGAAGTTTAGTGCTACTGCTATGTTTGATTTTTACATGGA AGTACAGAAAAATTGGACGACTCATAATAGTAGTAGTACCATTTTGTTAACTGAAGCAGAAATTGAACCTTTGGGCAAAC GCATTTATGAAGCAATTCGCGATGATGAGGGTTATATTTCCTCAGCATTGTTAGCACGGTTTGATGCACCGTTCCCTCGG TTACCCTTTGAACATATCTCTAAGGATCAATATGAAAAAATGCAAGAGGATGTGTTACAACGACGTAAGTCTCATAATTT CTCCGAGTTGATGAATGGTTATGTGTTAGCGAGTGAGTTACCAGAGACAGGACCTCAAGATCCTGCTTGTTCTGGGATGG TTTGTGAGTTGAAGGGTTTAGAACCCGAAATTCATTAG
Upstream 100 bases:
>100_bases ATAAAGGGTAACCGGAAATGAACTTGCTTAGTTTAACCCAGAATTATATGAACGTTGTGGGAACATTTTAAATCAAGCAG TTGGGCGACAATTAAATTCT
Downstream 100 bases:
>100_bases AGCTAGAGGTGAAAAAGAATGTCGTAGTGCATCTAGCTCTAAAATGTAAGTAAAAAAACCTTTGAAAGGGGGCAAAAGGG GAATTTCTCTCCCCCTTTTT
Product: hypothetical protein
Products: ribonucleoside diphosphate; thioredoxin
Alternate protein names: Ribonucleoside-Diphosphate Reductase Subunit Alpha; Ribonucleoside-Diphosphate Reductase; RP Ribonucleotide Reductase-Like Protein; Ribonucleoside-Diphosphate Reductase Alpha Chain; Ribonucleoside-Diphosphate Reductase Alpha Subunit; Hedgehog/Intein Hint Domain-Containing Protein; Ribonucleotide Reductase Large Subunit; Ribonucleotide-Diphosphate Reductase Alpha Subunit; Ribonucleotide-Diphosphate Reductase Subunit Alpha; RP Ribonucleotide Reductase; Protein Splicing Site; Ribonucleoside Triphosphate Reductase B
Number of amino acids: Translated: 1985; Mature: 1985
Protein sequence:
>1985_residues MECCLLIDEAAVTIVAGNIRRCLPEGALVHTASGLVAIEKIRIGDRVLTSQGFYPVTNFFDQGIQSLCRIQTEDGYFECT PDHKVAVLQDLYGNYKMIKAKDLQEGDRLIFVPQAIPGTPTELPELKAVPSSEAKLITIPALQSEVAYFLGYLSGNGSVG SDGGQVRFRVSQDSPEILERLINVAQEFGLETHRLRTLEQFQTQAYELELNSSTLNKYLSQFKQPSNSVCIPECILMGTT EIRQAYLAGLVDADGCHSQGILLTSVDQGFLRQVQALYASLGITTRLCGSVQKPTGTWEGELVTVSEGGYEAVEKLMMNY STQFPVQKPNHLKFFPDQGFPKEMVRPLVKTSQDHLGKVHKQMIFPSVKKFVVDATDLIPVKVKKVEMDVREASTYDIEV ASIHEFVCQGILVSNSAGIRQGSNSDHIFTVAKDNLWRQDENGNWGIDPKRDALRMANHTHVFHYKPTLEECVEAVRKQF YSGEGAIQWAGEAVARANRDLLFTPEIKSDFLKAYEKNNAKKWFQEHYPNITNDELEHRLARLGLNPCHSGDTLVSTDQG LIAIQDLVGKQFQALVDLRSIGLSGVRLTDAIAFATGVKTTYQVILNNGMQMRCTGDHQHFTSRGWVSTRDLTDDDNIYI QGGAGQFGKGTISVAQAQMLGWWYRDGYNVKIKARSHSHGGKQDYFATGFVFDQDDYETAYNVVEKAVASITEREYVTKL HKGVYEFPTQYPKLEKFFADLGIVGKEELPNNFLSQSQEVLIGFLQGIFSADGIVYEDSRRIKLTMVSEKLLQQIQLILS NLGIISTVGLVREKDYIGVPYRTVNVTHEVSLCRGSYELLISSFSFSLFQQLIGFPLSPSKNVKAEKLLVQTLANYSEST INSKFISKVKKVEEFGEEVVYDLHVPLTNSFIANGCLTHNCGEIIGSNFHCVSGDTLLITRDSIHKIKDVVGQKIEIWNG KNWSQVIPLKTGKDRKLYRVRFGDGSYLDVTEYHRFFVKDRFGKKYEEVQTKDLLTHSKYALDVEPFIIDYHDGDSINLS YAYTLGAALGNGTIDQNSNGKIRVYSHKAELIFAGNKSLERQYNYLPSFVDVIDLGFSGELLRRLQTEPDALNTIASWNK SAILAFIAGLADTDGSETKGNGIKISVSDYERAKRLQLLLTKCGIRASVNLMASRGCTTNLGERNQDLYYLQITDCREIP CQRLDTTKVCEAKFQGKYQTIQNVEELPGLHDTYCFEEPEFHKGVFGNALTGNCNLSEIHLNQIEPNNYKEQEEAFTAGA LSVATLLKHEFLEPRYRYSRELDPIVGVSFTGLFDFFVKAFGIEWLRWWQAGRPATAQGLEFKQQEAKYLTRWREIVHRV VWDYCDRHNLKRPNRCTTVQPSGCLDKTALRIFNQGLLYADEVVTPGSGETVGLGLTVRNGIGASTAIANQPMELVEIKL ANGRKLRMTPNHRMSVKGKWIHACNLKPGMLLDYSIGEYQKREDTLLIPLQLEDYTEVNNSQTLGHNGGVLTKKIMTPAS MTSDLAYFLGCLFGNGCIVQNKYQVCFYHSRLDVLYGLQEKGKKLFGIKGSLNDFANGRFELCFASRQLFYWLHLNQLVK TQKSEDLERIPLSLRRSSRVTLLSFFCGLIDTNGYVPQDGKLSIASASSDFIHNLQQIGESIGLCFSIYQNTKGENLQNQ HNNTWGLCLSPMLSNVDALDYLNHNSIKCQEGPVVISKCVLNYSPYKIESVNIGAVCDYSYDFAIEGINDNDSWYWQGAL KSHNTKSLLTNASPGWHPPFGLRWVRRITFAKNDPVALACLDYGYSVIPGQSGKDENGNLLNDPFDERAKEWLVEIPVQV SWIDLPGVEEIAIEKFSATAMFDFYMEVQKNWTTHNSSSTILLTEAEIEPLGKRIYEAIRDDEGYISSALLARFDAPFPR LPFEHISKDQYEKMQEDVLQRRKSHNFSELMNGYVLASELPETGPQDPACSGMVCELKGLEPEIH
Sequences:
>Translated_1985_residues MECCLLIDEAAVTIVAGNIRRCLPEGALVHTASGLVAIEKIRIGDRVLTSQGFYPVTNFFDQGIQSLCRIQTEDGYFECT PDHKVAVLQDLYGNYKMIKAKDLQEGDRLIFVPQAIPGTPTELPELKAVPSSEAKLITIPALQSEVAYFLGYLSGNGSVG SDGGQVRFRVSQDSPEILERLINVAQEFGLETHRLRTLEQFQTQAYELELNSSTLNKYLSQFKQPSNSVCIPECILMGTT EIRQAYLAGLVDADGCHSQGILLTSVDQGFLRQVQALYASLGITTRLCGSVQKPTGTWEGELVTVSEGGYEAVEKLMMNY STQFPVQKPNHLKFFPDQGFPKEMVRPLVKTSQDHLGKVHKQMIFPSVKKFVVDATDLIPVKVKKVEMDVREASTYDIEV ASIHEFVCQGILVSNSAGIRQGSNSDHIFTVAKDNLWRQDENGNWGIDPKRDALRMANHTHVFHYKPTLEECVEAVRKQF YSGEGAIQWAGEAVARANRDLLFTPEIKSDFLKAYEKNNAKKWFQEHYPNITNDELEHRLARLGLNPCHSGDTLVSTDQG LIAIQDLVGKQFQALVDLRSIGLSGVRLTDAIAFATGVKTTYQVILNNGMQMRCTGDHQHFTSRGWVSTRDLTDDDNIYI QGGAGQFGKGTISVAQAQMLGWWYRDGYNVKIKARSHSHGGKQDYFATGFVFDQDDYETAYNVVEKAVASITEREYVTKL HKGVYEFPTQYPKLEKFFADLGIVGKEELPNNFLSQSQEVLIGFLQGIFSADGIVYEDSRRIKLTMVSEKLLQQIQLILS NLGIISTVGLVREKDYIGVPYRTVNVTHEVSLCRGSYELLISSFSFSLFQQLIGFPLSPSKNVKAEKLLVQTLANYSEST INSKFISKVKKVEEFGEEVVYDLHVPLTNSFIANGCLTHNCGEIIGSNFHCVSGDTLLITRDSIHKIKDVVGQKIEIWNG KNWSQVIPLKTGKDRKLYRVRFGDGSYLDVTEYHRFFVKDRFGKKYEEVQTKDLLTHSKYALDVEPFIIDYHDGDSINLS YAYTLGAALGNGTIDQNSNGKIRVYSHKAELIFAGNKSLERQYNYLPSFVDVIDLGFSGELLRRLQTEPDALNTIASWNK SAILAFIAGLADTDGSETKGNGIKISVSDYERAKRLQLLLTKCGIRASVNLMASRGCTTNLGERNQDLYYLQITDCREIP CQRLDTTKVCEAKFQGKYQTIQNVEELPGLHDTYCFEEPEFHKGVFGNALTGNCNLSEIHLNQIEPNNYKEQEEAFTAGA LSVATLLKHEFLEPRYRYSRELDPIVGVSFTGLFDFFVKAFGIEWLRWWQAGRPATAQGLEFKQQEAKYLTRWREIVHRV VWDYCDRHNLKRPNRCTTVQPSGCLDKTALRIFNQGLLYADEVVTPGSGETVGLGLTVRNGIGASTAIANQPMELVEIKL ANGRKLRMTPNHRMSVKGKWIHACNLKPGMLLDYSIGEYQKREDTLLIPLQLEDYTEVNNSQTLGHNGGVLTKKIMTPAS MTSDLAYFLGCLFGNGCIVQNKYQVCFYHSRLDVLYGLQEKGKKLFGIKGSLNDFANGRFELCFASRQLFYWLHLNQLVK TQKSEDLERIPLSLRRSSRVTLLSFFCGLIDTNGYVPQDGKLSIASASSDFIHNLQQIGESIGLCFSIYQNTKGENLQNQ HNNTWGLCLSPMLSNVDALDYLNHNSIKCQEGPVVISKCVLNYSPYKIESVNIGAVCDYSYDFAIEGINDNDSWYWQGAL KSHNTKSLLTNASPGWHPPFGLRWVRRITFAKNDPVALACLDYGYSVIPGQSGKDENGNLLNDPFDERAKEWLVEIPVQV SWIDLPGVEEIAIEKFSATAMFDFYMEVQKNWTTHNSSSTILLTEAEIEPLGKRIYEAIRDDEGYISSALLARFDAPFPR LPFEHISKDQYEKMQEDVLQRRKSHNFSELMNGYVLASELPETGPQDPACSGMVCELKGLEPEIH >Mature_1985_residues MECCLLIDEAAVTIVAGNIRRCLPEGALVHTASGLVAIEKIRIGDRVLTSQGFYPVTNFFDQGIQSLCRIQTEDGYFECT PDHKVAVLQDLYGNYKMIKAKDLQEGDRLIFVPQAIPGTPTELPELKAVPSSEAKLITIPALQSEVAYFLGYLSGNGSVG SDGGQVRFRVSQDSPEILERLINVAQEFGLETHRLRTLEQFQTQAYELELNSSTLNKYLSQFKQPSNSVCIPECILMGTT EIRQAYLAGLVDADGCHSQGILLTSVDQGFLRQVQALYASLGITTRLCGSVQKPTGTWEGELVTVSEGGYEAVEKLMMNY STQFPVQKPNHLKFFPDQGFPKEMVRPLVKTSQDHLGKVHKQMIFPSVKKFVVDATDLIPVKVKKVEMDVREASTYDIEV ASIHEFVCQGILVSNSAGIRQGSNSDHIFTVAKDNLWRQDENGNWGIDPKRDALRMANHTHVFHYKPTLEECVEAVRKQF YSGEGAIQWAGEAVARANRDLLFTPEIKSDFLKAYEKNNAKKWFQEHYPNITNDELEHRLARLGLNPCHSGDTLVSTDQG LIAIQDLVGKQFQALVDLRSIGLSGVRLTDAIAFATGVKTTYQVILNNGMQMRCTGDHQHFTSRGWVSTRDLTDDDNIYI QGGAGQFGKGTISVAQAQMLGWWYRDGYNVKIKARSHSHGGKQDYFATGFVFDQDDYETAYNVVEKAVASITEREYVTKL HKGVYEFPTQYPKLEKFFADLGIVGKEELPNNFLSQSQEVLIGFLQGIFSADGIVYEDSRRIKLTMVSEKLLQQIQLILS NLGIISTVGLVREKDYIGVPYRTVNVTHEVSLCRGSYELLISSFSFSLFQQLIGFPLSPSKNVKAEKLLVQTLANYSEST INSKFISKVKKVEEFGEEVVYDLHVPLTNSFIANGCLTHNCGEIIGSNFHCVSGDTLLITRDSIHKIKDVVGQKIEIWNG KNWSQVIPLKTGKDRKLYRVRFGDGSYLDVTEYHRFFVKDRFGKKYEEVQTKDLLTHSKYALDVEPFIIDYHDGDSINLS YAYTLGAALGNGTIDQNSNGKIRVYSHKAELIFAGNKSLERQYNYLPSFVDVIDLGFSGELLRRLQTEPDALNTIASWNK SAILAFIAGLADTDGSETKGNGIKISVSDYERAKRLQLLLTKCGIRASVNLMASRGCTTNLGERNQDLYYLQITDCREIP CQRLDTTKVCEAKFQGKYQTIQNVEELPGLHDTYCFEEPEFHKGVFGNALTGNCNLSEIHLNQIEPNNYKEQEEAFTAGA LSVATLLKHEFLEPRYRYSRELDPIVGVSFTGLFDFFVKAFGIEWLRWWQAGRPATAQGLEFKQQEAKYLTRWREIVHRV VWDYCDRHNLKRPNRCTTVQPSGCLDKTALRIFNQGLLYADEVVTPGSGETVGLGLTVRNGIGASTAIANQPMELVEIKL ANGRKLRMTPNHRMSVKGKWIHACNLKPGMLLDYSIGEYQKREDTLLIPLQLEDYTEVNNSQTLGHNGGVLTKKIMTPAS MTSDLAYFLGCLFGNGCIVQNKYQVCFYHSRLDVLYGLQEKGKKLFGIKGSLNDFANGRFELCFASRQLFYWLHLNQLVK TQKSEDLERIPLSLRRSSRVTLLSFFCGLIDTNGYVPQDGKLSIASASSDFIHNLQQIGESIGLCFSIYQNTKGENLQNQ HNNTWGLCLSPMLSNVDALDYLNHNSIKCQEGPVVISKCVLNYSPYKIESVNIGAVCDYSYDFAIEGINDNDSWYWQGAL KSHNTKSLLTNASPGWHPPFGLRWVRRITFAKNDPVALACLDYGYSVIPGQSGKDENGNLLNDPFDERAKEWLVEIPVQV SWIDLPGVEEIAIEKFSATAMFDFYMEVQKNWTTHNSSSTILLTEAEIEPLGKRIYEAIRDDEGYISSALLARFDAPFPR LPFEHISKDQYEKMQEDVLQRRKSHNFSELMNGYVLASELPETGPQDPACSGMVCELKGLEPEIH
Specific function: Unknown
COG id: COG1372
COG function: function code L; Intein/homing endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.17.4.1
Molecular weight: Translated: 223149; Mature: 223149
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS50817 INTEIN_N_TER ; PS50818 INTEIN_C_TER ; PS50819 INTEIN_ENDONUCLEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECCLLIDEAAVTIVAGNIRRCLPEGALVHTASGLVAIEKIRIGDRVLTSQGFYPVTNFF CCEEEEECCCEEEEEECCHHHHCCCCCEEEECCCEEEEEEEECCCEEECCCCCCHHHHHH DQGIQSLCRIQTEDGYFECTPDHKVAVLQDLYGNYKMIKAKDLQEGDRLIFVPQAIPGTP HHHHHHHHEEECCCCEEEECCCCCHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCC TELPELKAVPSSEAKLITIPALQSEVAYFLGYLSGNGSVGSDGGQVRFRVSQDSPEILER CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCCHHHHHH LINVAQEFGLETHRLRTLEQFQTQAYELELNSSTLNKYLSQFKQPSNSVCIPECILMGTT HHHHHHHHCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHCCCH EIRQAYLAGLVDADGCHSQGILLTSVDQGFLRQVQALYASLGITTRLCGSVQKPTGTWEG HHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCC ELVTVSEGGYEAVEKLMMNYSTQFPVQKPNHLKFFPDQGFPKEMVRPLVKTSQDHLGKVH EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHH KQMIFPSVKKFVVDATDLIPVKVKKVEMDVREASTYDIEVASIHEFVCQGILVSNSAGIR HHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHCCCCEEEHHHHHHHHHCCEEEECCCCCC QGSNSDHIFTVAKDNLWRQDENGNWGIDPKRDALRMANHTHVFHYKPTLEECVEAVRKQF CCCCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHH YSGEGAIQWAGEAVARANRDLLFTPEIKSDFLKAYEKNNAKKWFQEHYPNITNDELEHRL HCCCCCEEECHHHHHHCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHH ARLGLNPCHSGDTLVSTDQGLIAIQDLVGKQFQALVDLRSIGLSGVRLTDAIAFATGVKT HHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCHH TYQVILNNGMQMRCTGDHQHFTSRGWVSTRDLTDDDNIYIQGGAGQFGKGTISVAQAQML HHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHH GWWYRDGYNVKIKARSHSHGGKQDYFATGFVFDQDDYETAYNVVEKAVASITEREYVTKL HHEEECCEEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH HKGVYEFPTQYPKLEKFFADLGIVGKEELPNNFLSQSQEVLIGFLQGIFSADGIVYEDSR HHHHHHCCCCCHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC RIKLTMVSEKLLQQIQLILSNLGIISTVGLVREKDYIGVPYRTVNVTHEVSLCRGSYELL EEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEEEHHHHCCHHHHH ISSFSFSLFQQLIGFPLSPSKNVKAEKLLVQTLANYSESTINSKFISKVKKVEEFGEEVV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE YDLHVPLTNSFIANGCLTHNCGEIIGSNFHCVSGDTLLITRDSIHKIKDVVGQKIEIWNG EEEECCCCHHHHHCCCCCCCCHHHHCCCEEEECCCEEEEECHHHHHHHHHCCCEEEEECC KNWSQVIPLKTGKDRKLYRVRFGDGSYLDVTEYHRFFVKDRFGKKYEEVQTKDLLTHSKY CCCCEEEEECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCE ALDVEPFIIDYHDGDSINLSYAYTLGAALGNGTIDQNSNGKIRVYSHKAELIFAGNKSLE EEECCCEEEEECCCCEEEEEEEEEEHHHHCCCCCCCCCCCEEEEEEECEEEEEECCCHHH RQYNYLPSFVDVIDLGFSGELLRRLQTEPDALNTIASWNKSAILAFIAGLADTDGSETKG HHHHHCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC NGIKISVSDYERAKRLQLLLTKCGIRASVNLMASRGCTTNLGERNQDLYYLQITDCREIP CCEEEEECHHHHHHHHHHHHHHCCCCEEEEEHCCCCCCCCCCCCCCCEEEEEECCCCCCC CQRLDTTKVCEAKFQGKYQTIQNVEELPGLHDTYCFEEPEFHKGVFGNALTGNCNLSEIH HHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEE LNQIEPNNYKEQEEAFTAGALSVATLLKHEFLEPRYRYSRELDPIVGVSFTGLFDFFVKA EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHCCHHHHHHHHHHHH FGIEWLRWWQAGRPATAQGLEFKQQEAKYLTRWREIVHRVVWDYCDRHNLKRPNRCTTVQ HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC PSGCLDKTALRIFNQGLLYADEVVTPGSGETVGLGLTVRNGIGASTAIANQPMELVEIKL CCCCHHHHHHHHHHCCCEEECCEECCCCCCEEEEEEEEECCCCCCHHHHCCCCEEEEEEE ANGRKLRMTPNHRMSVKGKWIHACNLKPGMLLDYSIGEYQKREDTLLIPLQLEDYTEVNN CCCCEEEECCCCCEEECCCEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCHHCCCC SQTLGHNGGVLTKKIMTPASMTSDLAYFLGCLFGNGCIVQNKYQVCFYHSRLDVLYGLQE CCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECHHHHHHCHHH KGKKLFGIKGSLNDFANGRFELCFASRQLFYWLHLNQLVKTQKSEDLERIPLSLRRSSRV CCCEEEEECCCCHHHCCCEEEEEEECCCEEEEEEHHHHHHHHHCCCHHHCCHHHHCCCCH TLLSFFCGLIDTNGYVPQDGKLSIASASSDFIHNLQQIGESIGLCFSIYQNTKGENLQNQ HHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC HNNTWGLCLSPMLSNVDALDYLNHNSIKCQEGPVVISKCVLNYSPYKIESVNIGAVCDYS CCCCHHEEHHHHHCCCCHHHHCCCCCEEECCCCEEEEHHHHCCCCEEEEEEEECEEECCC YDFAIEGINDNDSWYWQGALKSHNTKSLLTNASPGWHPPFGLRWVRRITFAKNDPVALAC CEEEEECCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEE LDYGYSVIPGQSGKDENGNLLNDPFDERAKEWLVEIPVQVSWIDLPGVEEIAIEKFSATA ECCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHH MFDFYMEVQKNWTTHNSSSTILLTEAEIEPLGKRIYEAIRDDEGYISSALLARFDAPFPR HHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC LPFEHISKDQYEKMQEDVLQRRKSHNFSELMNGYVLASELPETGPQDPACSGMVCELKGL CCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEECC EPEIH CCCCC >Mature Secondary Structure MECCLLIDEAAVTIVAGNIRRCLPEGALVHTASGLVAIEKIRIGDRVLTSQGFYPVTNFF CCEEEEECCCEEEEEECCHHHHCCCCCEEEECCCEEEEEEEECCCEEECCCCCCHHHHHH DQGIQSLCRIQTEDGYFECTPDHKVAVLQDLYGNYKMIKAKDLQEGDRLIFVPQAIPGTP HHHHHHHHEEECCCCEEEECCCCCHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCC TELPELKAVPSSEAKLITIPALQSEVAYFLGYLSGNGSVGSDGGQVRFRVSQDSPEILER CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCCHHHHHH LINVAQEFGLETHRLRTLEQFQTQAYELELNSSTLNKYLSQFKQPSNSVCIPECILMGTT HHHHHHHHCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCCCCCCCCCCHHHHCCCH EIRQAYLAGLVDADGCHSQGILLTSVDQGFLRQVQALYASLGITTRLCGSVQKPTGTWEG HHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCC ELVTVSEGGYEAVEKLMMNYSTQFPVQKPNHLKFFPDQGFPKEMVRPLVKTSQDHLGKVH EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHH KQMIFPSVKKFVVDATDLIPVKVKKVEMDVREASTYDIEVASIHEFVCQGILVSNSAGIR HHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHCCCCEEEHHHHHHHHHCCEEEECCCCCC QGSNSDHIFTVAKDNLWRQDENGNWGIDPKRDALRMANHTHVFHYKPTLEECVEAVRKQF CCCCCCEEEEEECCCCEECCCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHH YSGEGAIQWAGEAVARANRDLLFTPEIKSDFLKAYEKNNAKKWFQEHYPNITNDELEHRL HCCCCCEEECHHHHHHCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHH ARLGLNPCHSGDTLVSTDQGLIAIQDLVGKQFQALVDLRSIGLSGVRLTDAIAFATGVKT HHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCHH TYQVILNNGMQMRCTGDHQHFTSRGWVSTRDLTDDDNIYIQGGAGQFGKGTISVAQAQML HHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHH GWWYRDGYNVKIKARSHSHGGKQDYFATGFVFDQDDYETAYNVVEKAVASITEREYVTKL HHEEECCEEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH HKGVYEFPTQYPKLEKFFADLGIVGKEELPNNFLSQSQEVLIGFLQGIFSADGIVYEDSR HHHHHHCCCCCHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC RIKLTMVSEKLLQQIQLILSNLGIISTVGLVREKDYIGVPYRTVNVTHEVSLCRGSYELL EEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEEEHHHHCCHHHHH ISSFSFSLFQQLIGFPLSPSKNVKAEKLLVQTLANYSESTINSKFISKVKKVEEFGEEVV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE YDLHVPLTNSFIANGCLTHNCGEIIGSNFHCVSGDTLLITRDSIHKIKDVVGQKIEIWNG EEEECCCCHHHHHCCCCCCCCHHHHCCCEEEECCCEEEEECHHHHHHHHHCCCEEEEECC KNWSQVIPLKTGKDRKLYRVRFGDGSYLDVTEYHRFFVKDRFGKKYEEVQTKDLLTHSKY CCCCEEEEECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCE ALDVEPFIIDYHDGDSINLSYAYTLGAALGNGTIDQNSNGKIRVYSHKAELIFAGNKSLE EEECCCEEEEECCCCEEEEEEEEEEHHHHCCCCCCCCCCCEEEEEEECEEEEEECCCHHH RQYNYLPSFVDVIDLGFSGELLRRLQTEPDALNTIASWNKSAILAFIAGLADTDGSETKG HHHHHCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC NGIKISVSDYERAKRLQLLLTKCGIRASVNLMASRGCTTNLGERNQDLYYLQITDCREIP CCEEEEECHHHHHHHHHHHHHHCCCCEEEEEHCCCCCCCCCCCCCCCEEEEEECCCCCCC CQRLDTTKVCEAKFQGKYQTIQNVEELPGLHDTYCFEEPEFHKGVFGNALTGNCNLSEIH HHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEE LNQIEPNNYKEQEEAFTAGALSVATLLKHEFLEPRYRYSRELDPIVGVSFTGLFDFFVKA EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHCCHHHHHHHHHHHH FGIEWLRWWQAGRPATAQGLEFKQQEAKYLTRWREIVHRVVWDYCDRHNLKRPNRCTTVQ HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC PSGCLDKTALRIFNQGLLYADEVVTPGSGETVGLGLTVRNGIGASTAIANQPMELVEIKL CCCCHHHHHHHHHHCCCEEECCEECCCCCCEEEEEEEEECCCCCCHHHHCCCCEEEEEEE ANGRKLRMTPNHRMSVKGKWIHACNLKPGMLLDYSIGEYQKREDTLLIPLQLEDYTEVNN CCCCEEEECCCCCEEECCCEEEEECCCCCCEEECCCCCCCCCCCCEEEEEEECCHHCCCC SQTLGHNGGVLTKKIMTPASMTSDLAYFLGCLFGNGCIVQNKYQVCFYHSRLDVLYGLQE CCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECHHHHHHCHHH KGKKLFGIKGSLNDFANGRFELCFASRQLFYWLHLNQLVKTQKSEDLERIPLSLRRSSRV CCCEEEEECCCCHHHCCCEEEEEEECCCEEEEEEHHHHHHHHHCCCHHHCCHHHHCCCCH TLLSFFCGLIDTNGYVPQDGKLSIASASSDFIHNLQQIGESIGLCFSIYQNTKGENLQNQ HHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC HNNTWGLCLSPMLSNVDALDYLNHNSIKCQEGPVVISKCVLNYSPYKIESVNIGAVCDYS CCCCHHEEHHHHHCCCCHHHHCCCCCEEECCCCEEEEHHHHCCCCEEEEEEEECEEECCC YDFAIEGINDNDSWYWQGALKSHNTKSLLTNASPGWHPPFGLRWVRRITFAKNDPVALAC CEEEEECCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEE LDYGYSVIPGQSGKDENGNLLNDPFDERAKEWLVEIPVQVSWIDLPGVEEIAIEKFSATA ECCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHH MFDFYMEVQKNWTTHNSSSTILLTEAEIEPLGKRIYEAIRDDEGYISSALLARFDAPFPR HHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC LPFEHISKDQYEKMQEDVLQRRKSHNFSELMNGYVLASELPETGPQDPACSGMVCELKGL CCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEECC EPEIH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2'-deoxyribonucleoside diphosphate; thioredoxin disulfide; H2O
Specific reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA