Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474272

Identifier: 113474272

GI number: 113474272

Start: 606874

End: 607626

Strand: Direct

Name: 113474272

Synonym: Tery_0392

Alternate gene names: NA

Gene position: 606874-607626 (Clockwise)

Preceding gene: 113474269

Following gene: 113474273

Centisome position: 7.83

GC content: 38.91

Gene sequence:

>753_bases
GTGCAAATTACTAAACGTAACATTAATTTAACAGTTGATGACAGTTTAATGCGTGTATATGTGGCAACCCCTAAACCACC
AGGAACTTACCCAGGTATTATATTTTACAGCGACATCTATCAGCTAGGAGGCCCAATAATTCGTCTAGCTAACTATTTAG
CAGGATATGGTTATGTAGTTGCTGCCCCAGAAATATTTCATCGAACAGAGTCAATAGGTCTTGTTATTGAGCCAGATGAC
TTAGGGCGGATGCGGGGTAATGATAATGCACGTCGAACAGCAGTATCTGAGTATGATGCAGATACCCAAGCTGTTATTGA
ATTTCTCAAAGCAGAAAGTTCTGTTGCCGCGGATCAAATAGGAGCTATGGGTTTTTGTATTGGTGGCCATTTAGCCTTCC
GGGCTGCTTTTGAAAAAGAGATTAAAGCTACAGTGTGTTGTTATCCCACCGGCATTCCTAGTGGCAAGTTAGGTAAAGGA
GTTGCTGATACTATTAAACGAGTCAGTGAAATTAAAGGTGAGATACTTATTGTTTTTGGTAGTAAAGATCCTCATACACC
AGAAAGCGATCGCCAAACTATGATTCAAACTCTAGAGCAAACTGGTGTAACTCACAAAATTTTCTTATATGAAGCAGAGC
ATACTTTCATGCGTGATGATGGTTATCGTTATGACTCTGTTGCAACGACTAAAGCTTGGTCTGAAATCACACCTTTTTTT
AATAGTGTGTTTAAAAATAATGGTAATAAATAG

Upstream 100 bases:

>100_bases
GTTATTGTAAAATCAATTTTAAGAAACCTTCATAATAAGCATCCAATAAGTTAAGCTAGTCTATTAGAAAAATTATTGGG
TGTAACAATGGAGGTAATAG

Downstream 100 bases:

>100_bases
ATTAGGAGTTACCCCCGGGAGCCCTCAGTTTTTAGGATAAATCCTTATTTTTAAGAATAGACACCTAGGAAAAAACTAAG
TTTCAGGGCTCATGTGGGTG

Product: carboxymethylenebutenolidase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVVAAPEIFHRTESIGLVIEPDD
LGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQIGAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKG
VADTIKRVSEIKGEILIVFGSKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF
NSVFKNNGNK

Sequences:

>Translated_250_residues
MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVVAAPEIFHRTESIGLVIEPDD
LGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQIGAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKG
VADTIKRVSEIKGEILIVFGSKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF
NSVFKNNGNK
>Mature_250_residues
MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVVAAPEIFHRTESIGLVIEPDD
LGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQIGAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKG
VADTIKRVSEIKGEILIVFGSKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF
NSVFKNNGNK

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320117, Length=239, Percent_Identity=33.8912133891213, Blast_Score=135, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 27636; Mature: 27636

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVV
CCEECCCCEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHCCCEEE
AAPEIFHRTESIGLVIEPDDLGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQI
ECHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKGVADTIKRVSEIKGEILIVFG
CHHHEEHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
SKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF
CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEECCCCCEECCCHHHHHHHHHHHHH
NSVFKNNGNK
HHHHHCCCCC
>Mature Secondary Structure
MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVV
CCEECCCCEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHCCCEEE
AAPEIFHRTESIGLVIEPDDLGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQI
ECHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKGVADTIKRVSEIKGEILIVFG
CHHHEEHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
SKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF
CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEECCCCCEECCCHHHHHHHHHHHHH
NSVFKNNGNK
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]