Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113474272
Identifier: 113474272
GI number: 113474272
Start: 606874
End: 607626
Strand: Direct
Name: 113474272
Synonym: Tery_0392
Alternate gene names: NA
Gene position: 606874-607626 (Clockwise)
Preceding gene: 113474269
Following gene: 113474273
Centisome position: 7.83
GC content: 38.91
Gene sequence:
>753_bases GTGCAAATTACTAAACGTAACATTAATTTAACAGTTGATGACAGTTTAATGCGTGTATATGTGGCAACCCCTAAACCACC AGGAACTTACCCAGGTATTATATTTTACAGCGACATCTATCAGCTAGGAGGCCCAATAATTCGTCTAGCTAACTATTTAG CAGGATATGGTTATGTAGTTGCTGCCCCAGAAATATTTCATCGAACAGAGTCAATAGGTCTTGTTATTGAGCCAGATGAC TTAGGGCGGATGCGGGGTAATGATAATGCACGTCGAACAGCAGTATCTGAGTATGATGCAGATACCCAAGCTGTTATTGA ATTTCTCAAAGCAGAAAGTTCTGTTGCCGCGGATCAAATAGGAGCTATGGGTTTTTGTATTGGTGGCCATTTAGCCTTCC GGGCTGCTTTTGAAAAAGAGATTAAAGCTACAGTGTGTTGTTATCCCACCGGCATTCCTAGTGGCAAGTTAGGTAAAGGA GTTGCTGATACTATTAAACGAGTCAGTGAAATTAAAGGTGAGATACTTATTGTTTTTGGTAGTAAAGATCCTCATACACC AGAAAGCGATCGCCAAACTATGATTCAAACTCTAGAGCAAACTGGTGTAACTCACAAAATTTTCTTATATGAAGCAGAGC ATACTTTCATGCGTGATGATGGTTATCGTTATGACTCTGTTGCAACGACTAAAGCTTGGTCTGAAATCACACCTTTTTTT AATAGTGTGTTTAAAAATAATGGTAATAAATAG
Upstream 100 bases:
>100_bases GTTATTGTAAAATCAATTTTAAGAAACCTTCATAATAAGCATCCAATAAGTTAAGCTAGTCTATTAGAAAAATTATTGGG TGTAACAATGGAGGTAATAG
Downstream 100 bases:
>100_bases ATTAGGAGTTACCCCCGGGAGCCCTCAGTTTTTAGGATAAATCCTTATTTTTAAGAATAGACACCTAGGAAAAAACTAAG TTTCAGGGCTCATGTGGGTG
Product: carboxymethylenebutenolidase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVVAAPEIFHRTESIGLVIEPDD LGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQIGAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKG VADTIKRVSEIKGEILIVFGSKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF NSVFKNNGNK
Sequences:
>Translated_250_residues MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVVAAPEIFHRTESIGLVIEPDD LGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQIGAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKG VADTIKRVSEIKGEILIVFGSKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF NSVFKNNGNK >Mature_250_residues MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVVAAPEIFHRTESIGLVIEPDD LGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQIGAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKG VADTIKRVSEIKGEILIVFGSKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF NSVFKNNGNK
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320117, Length=239, Percent_Identity=33.8912133891213, Blast_Score=135, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 27636; Mature: 27636
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVV CCEECCCCEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHCCCEEE AAPEIFHRTESIGLVIEPDDLGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQI ECHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKGVADTIKRVSEIKGEILIVFG CHHHEEHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC SKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEECCCCCEECCCHHHHHHHHHHHHH NSVFKNNGNK HHHHHCCCCC >Mature Secondary Structure MQITKRNINLTVDDSLMRVYVATPKPPGTYPGIIFYSDIYQLGGPIIRLANYLAGYGYVV CCEECCCCEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHHHCCHHHHHHHHHHCCCEEE AAPEIFHRTESIGLVIEPDDLGRMRGNDNARRTAVSEYDADTQAVIEFLKAESSVAADQI ECHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GAMGFCIGGHLAFRAAFEKEIKATVCCYPTGIPSGKLGKGVADTIKRVSEIKGEILIVFG CHHHEEHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC SKDPHTPESDRQTMIQTLEQTGVTHKIFLYEAEHTFMRDDGYRYDSVATTKAWSEITPFF CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEECCCCCEECCCHHHHHHHHHHHHH NSVFKNNGNK HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]