| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474208
Identifier: 113474208
GI number: 113474208
Start: 497092
End: 497943
Strand: Direct
Name: 113474208
Synonym: Tery_0321
Alternate gene names: NA
Gene position: 497092-497943 (Clockwise)
Preceding gene: 113474207
Following gene: 113474211
Centisome position: 6.41
GC content: 30.4
Gene sequence:
>852_bases ATGAATAGAAAAAAGCTGCTTTTAACTGGATTATTTTTAACAACTTTCCTCCTAATAATAATCAACTTATTCTCTGTACA TAACTCTGAAAGTAAATTACAAAAACCTCTCTCTCTTGGTTTTAAAATCATTAGTAATTCTCAGGGAATCACTCTTTATA AAAAAGATTCAGATTATCTACAGCTTATTGATTTATCTGAAGGTGCAAAAATTGATTTTATCTATGGAAAAATTACAGAT TTAGGTACGAAAAAAGGAGCTTACGGTGGTAATAATCCACAATTTGAACGTCAAACAATATCACAAGTATGGTCTAATTT ATATTCAGAAAATTCAAGTTTATTTTGCATTACTAATGGTCAATTTTTTAGAAATGATAAAAGCTCCTCTACAGCCTTAG CATTTCCTCTAAAGTCAGATGGAATTATAGTTAGTGATGGTTATGCAGGAGAAATAGAATTTTCTCATGAAAAGTTAATG CTAGAAGTCTGGAATAATAGAGCGTTAATTAGTAAGTTTCAGCCAAATAATTTGCAATTCTCAATAGCAACTAATTTTAT TGTTGGTTTACAGGAAAATGCTGATAAAGGAGTTGAGGATCAAACAGGTAGAACATTTATTGGAGTGCAAGATAAAGATG GCGATCGCCTCTATGAAACAATTTTAATTTTTACTTCTAAACAAGCAACTCAACCTCATGCTACTAATGTTTTGAAAAGT TTTGGTGCAACTCAAGTAATGATGTTAGATGGTGGAGGTTCAACACAATTAATTTGTCAGGGAAATAACTACATAGATTC ACAAAGAACTATTCCTCAAATGATTGCTATTTTTAGTGGAGATAAAGTCTAA
Upstream 100 bases:
>100_bases AACAGCCTAGTTTCAAATAAATGTAAAAACTTTGAATAATTCTAGCTATGTTTTTCATTATTTTTATATCTTTATTTTTT TTGTTATTTTACCTTGCCTA
Downstream 100 bases:
>100_bases TTAATTCCATTATTATAACTATATTTACTTAAGTATTCAGGATTCAGTTGTTATTCTTTTTTTTCTATTCCTTACTGGAT ATCAAAAAACTCCCAGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MNRKKLLLTGLFLTTFLLIIINLFSVHNSESKLQKPLSLGFKIISNSQGITLYKKDSDYLQLIDLSEGAKIDFIYGKITD LGTKKGAYGGNNPQFERQTISQVWSNLYSENSSLFCITNGQFFRNDKSSSTALAFPLKSDGIIVSDGYAGEIEFSHEKLM LEVWNNRALISKFQPNNLQFSIATNFIVGLQENADKGVEDQTGRTFIGVQDKDGDRLYETILIFTSKQATQPHATNVLKS FGATQVMMLDGGGSTQLICQGNNYIDSQRTIPQMIAIFSGDKV
Sequences:
>Translated_283_residues MNRKKLLLTGLFLTTFLLIIINLFSVHNSESKLQKPLSLGFKIISNSQGITLYKKDSDYLQLIDLSEGAKIDFIYGKITD LGTKKGAYGGNNPQFERQTISQVWSNLYSENSSLFCITNGQFFRNDKSSSTALAFPLKSDGIIVSDGYAGEIEFSHEKLM LEVWNNRALISKFQPNNLQFSIATNFIVGLQENADKGVEDQTGRTFIGVQDKDGDRLYETILIFTSKQATQPHATNVLKS FGATQVMMLDGGGSTQLICQGNNYIDSQRTIPQMIAIFSGDKV >Mature_283_residues MNRKKLLLTGLFLTTFLLIIINLFSVHNSESKLQKPLSLGFKIISNSQGITLYKKDSDYLQLIDLSEGAKIDFIYGKITD LGTKKGAYGGNNPQFERQTISQVWSNLYSENSSLFCITNGQFFRNDKSSSTALAFPLKSDGIIVSDGYAGEIEFSHEKLM LEVWNNRALISKFQPNNLQFSIATNFIVGLQENADKGVEDQTGRTFIGVQDKDGDRLYETILIFTSKQATQPHATNVLKS FGATQVMMLDGGGSTQLICQGNNYIDSQRTIPQMIAIFSGDKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31458; Mature: 31458
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKKLLLTGLFLTTFLLIIINLFSVHNSESKLQKPLSLGFKIISNSQGITLYKKDSDYL CCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEECCCCEEEEECCCCEE QLIDLSEGAKIDFIYGKITDLGTKKGAYGGNNPQFERQTISQVWSNLYSENSSLFCITNG EEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC QFFRNDKSSSTALAFPLKSDGIIVSDGYAGEIEFSHEKLMLEVWNNRALISKFQPNNLQF EEEECCCCCCEEEEEEECCCCEEEECCCCCEEEECCCEEEEEEECCCEEEEEECCCCEEE SIATNFIVGLQENADKGVEDQTGRTFIGVQDKDGDRLYETILIFTSKQATQPHATNVLKS EEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHH FGATQVMMLDGGGSTQLICQGNNYIDSQRTIPQMIAIFSGDKV CCCEEEEEEECCCCEEEEECCCCEECCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNRKKLLLTGLFLTTFLLIIINLFSVHNSESKLQKPLSLGFKIISNSQGITLYKKDSDYL CCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCEEEEECCCCEEEEECCCCEE QLIDLSEGAKIDFIYGKITDLGTKKGAYGGNNPQFERQTISQVWSNLYSENSSLFCITNG EEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC QFFRNDKSSSTALAFPLKSDGIIVSDGYAGEIEFSHEKLMLEVWNNRALISKFQPNNLQF EEEECCCCCCEEEEEEECCCCEEEECCCCCEEEECCCEEEEEEECCCEEEEEECCCCEEE SIATNFIVGLQENADKGVEDQTGRTFIGVQDKDGDRLYETILIFTSKQATQPHATNVLKS EEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHH FGATQVMMLDGGGSTQLICQGNNYIDSQRTIPQMIAIFSGDKV CCCEEEEEEECCCCEEEEECCCCEECCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA