| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is nadD [H]
Identifier: 113474206
GI number: 113474206
Start: 494912
End: 495502
Strand: Direct
Name: nadD [H]
Synonym: Tery_0319
Alternate gene names: 113474206
Gene position: 494912-495502 (Clockwise)
Preceding gene: 113474205
Following gene: 113474207
Centisome position: 6.39
GC content: 30.96
Gene sequence:
>591_bases ATGACAAAAATAGCCTTATTTGGAACTAGTGCAGATCCACCAACAAAGGGTCATCAAGCGATTATTAAATGGCTGTCTAA AAACTTTGAAAAAGTAGTAATTTGGGCATCAGATAATCCCTTAAAAAATCATCAAACATTCTTAGATAAACGCTCAAAAA TGTTATCAATTTTGATTGAAAATATTGACTATAATCAAAACAATATTTGTCTACATCAAGAATTAAGTAGTTGTCGTACT TTAGAAACTGTTGAACTTGCTATAAAAAAATGGAATGATGGAGAATTTACCTTAGTAGTAGGTTCAGATTTAGTCAAACA ATTACTAAGTTGGTATCACATCGAAGAACTTTTACAGAAAGTAGAATTATTAATAATACCTCGCCAAGGTATTACAACAG AAGAAGAAGATTTACAGAAATTAAGGGAGCTAAGTACAGAAGTAAAAATAGCTTTTCTAGAAGTTCCAAATGTTTCCTCA TCTGCATATCGTGAACAAGGAGACGAAATGACCATTACACCTCCTATTAAAGATTATATATATCGGCATAAGTTATACCA ATGGCAAAAAACGAGCACAGAGAAATTATAA
Upstream 100 bases:
>100_bases TAGGAAGTATTGATAACTGACAACTAAAATCACACAGGAAAAGCTGAATTTAATAACTAAATACTTACAAACTTATCTAA TCTAAAAAAAATATAGAATA
Downstream 100 bases:
>100_bases ATAATAAGGCAGACTTTAACGTAAGAGTAGATAATGTAATTTTTTCAGTTGACACCCAACAAAATCGTCTTTTAGTATTA TTAATAATGCGACAAAAAGA
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTKIALFGTSADPPTKGHQAIIKWLSKNFEKVVIWASDNPLKNHQTFLDKRSKMLSILIENIDYNQNNICLHQELSSCRT LETVELAIKKWNDGEFTLVVGSDLVKQLLSWYHIEELLQKVELLIIPRQGITTEEEDLQKLRELSTEVKIAFLEVPNVSS SAYREQGDEMTITPPIKDYIYRHKLYQWQKTSTEKL
Sequences:
>Translated_196_residues MTKIALFGTSADPPTKGHQAIIKWLSKNFEKVVIWASDNPLKNHQTFLDKRSKMLSILIENIDYNQNNICLHQELSSCRT LETVELAIKKWNDGEFTLVVGSDLVKQLLSWYHIEELLQKVELLIIPRQGITTEEEDLQKLRELSTEVKIAFLEVPNVSS SAYREQGDEMTITPPIKDYIYRHKLYQWQKTSTEKL >Mature_195_residues TKIALFGTSADPPTKGHQAIIKWLSKNFEKVVIWASDNPLKNHQTFLDKRSKMLSILIENIDYNQNNICLHQELSSCRTL ETVELAIKKWNDGEFTLVVGSDLVKQLLSWYHIEELLQKVELLIIPRQGITTEEEDLQKLRELSTEVKIAFLEVPNVSSS AYREQGDEMTITPPIKDYIYRHKLYQWQKTSTEKL
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 22775; Mature: 22644
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIALFGTSADPPTKGHQAIIKWLSKNFEKVVIWASDNPLKNHQTFLDKRSKMLSILIE CCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH NIDYNQNNICLHQELSSCRTLETVELAIKKWNDGEFTLVVGSDLVKQLLSWYHIEELLQK HCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH VELLIIPRQGITTEEEDLQKLRELSTEVKIAFLEVPNVSSSAYREQGDEMTITPPIKDYI HHEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCEEECCCHHHHH YRHKLYQWQKTSTEKL HHHHHHHHHCCCCCCC >Mature Secondary Structure TKIALFGTSADPPTKGHQAIIKWLSKNFEKVVIWASDNPLKNHQTFLDKRSKMLSILIE CEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH NIDYNQNNICLHQELSSCRTLETVELAIKKWNDGEFTLVVGSDLVKQLLSWYHIEELLQK HCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH VELLIIPRQGITTEEEDLQKLRELSTEVKIAFLEVPNVSSSAYREQGDEMTITPPIKDYI HHEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCEEECCCHHHHH YRHKLYQWQKTSTEKL HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]