Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474127

Identifier: 113474127

GI number: 113474127

Start: 352378

End: 353694

Strand: Direct

Name: 113474127

Synonym: Tery_0227

Alternate gene names: NA

Gene position: 352378-353694 (Clockwise)

Preceding gene: 113474122

Following gene: 113474128

Centisome position: 4.55

GC content: 29.69

Gene sequence:

>1317_bases
ATGAATAAAGAAATATTTGAATATATTTATTCCTCTCAATTAACAAAGAATGACGAAAAAACACTAAAGTTATTATTTGC
TAATAAGCAACGTAAAGAAATTGCTAAAGCCCTCAAGTGTGTAGAGACAAATGTTAGTCACAAATTCAAAGCGATCGCTA
AAAAATTCAACTATTTAGAATCTAATCAGAATTGTAAAGCAACAGAATACTTAGTTAAGATATTTAGCCAATATAAACCT
GATATGGTTGATCAACAACTAATTAAATCTTATGCTTCTTATCCAATTTTAATGCCAGATAAACCTGAAGAACCAGACTC
CCCTTTTTATATAGAACGTCATCAGATTCCACGTCGTTCTGTTGAATCTCAATGCTACGAGACTATAGAAAGACCAGGTT
CTTTAATCAGAATAAAAGCACCCAAAAAAATGGGTAAAACTTCTCTGATCAATCAGATACAAGCCAAAGCAAATGACAAT
AATTATATTTCTCAGTATCTGAGATTCGATCTTTTGATTGAGCCCCCAAATATCAGTAGTGTTAATAATTTTATTAAAGC
ATTTAATAAAATCATCAAAAGTCGGTTCCCAGATGTTTCAAAAGGCTCTAATTGGGATAATAATAATGCTAAAATTTCTT
GTACTAAAGATTTAAAATCACTATTGCTGAATTTACAGAAAAACTTAGTTTTAATATTAGATGAAGTGGATGAAATTTTC
CAATATCCAGAAATAACTAAAGATTTTTGTGGGATGTTAAGACATTGGTATGAAGAAAGTAATAATGTCAAAATTTGGAA
AAATTTACGAATAGTAATTGCTTATTCTACAGAATATCATGGCAAATTAGATATTTATCAATCTCCTTTTAATGTAGGCA
GCTCAATAGAATTAAAGGAGTTTACAAAAGAAGAAGTAACTCGATTAATATTCTTATACCAACTTGACCCCAAAATAGTG
ACTGATTTAATGTCTATGGTAGGAGGGCATCCTTATTTAATTAGGTTAGCTTTATATAGAATGTCTCAGGAAGAATTGAC
AATTGAAAAATTCTTAAAAGAAGCCCCCACTGATAGTGGAATTTATCGAGACCATTTCAGCAGACATTTAGAAACTATAG
ACAAAAGGTCAAAAATTAAAACAGTTTTTCAAGAAATATTAAAAGCTAATGAACCAGTCAGTTTTTCTGATAAAAATAGA
GAGGTACGTCAGCTAGAAGCTATGGGATTAATTAAAATTGAAGGTAATAAGGCTAAAACTGGTTGTCAGTTATATCAAAA
ATATTTTGGAGAGTTTTTATTAGGCATTAGGTTTTAG

Upstream 100 bases:

>100_bases
AAGAAACCGGATTTATGAGGATCGATTATTGTCTTTATCAAAAACTATGAACATTAAGAATAGGTAGAAAATATGTGCTA
AACTGGCAAATAAAAAAGTT

Downstream 100 bases:

>100_bases
GTTTTAGGTATTAAGCGTTAGATTTAAAAATTAACAAACTTTACTCTTTTTTATTTTGACTGAATTTGTTCCATTAAACC
ATGTAGAATAATGCAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MNKEIFEYIYSSQLTKNDEKTLKLLFANKQRKEIAKALKCVETNVSHKFKAIAKKFNYLESNQNCKATEYLVKIFSQYKP
DMVDQQLIKSYASYPILMPDKPEEPDSPFYIERHQIPRRSVESQCYETIERPGSLIRIKAPKKMGKTSLINQIQAKANDN
NYISQYLRFDLLIEPPNISSVNNFIKAFNKIIKSRFPDVSKGSNWDNNNAKISCTKDLKSLLLNLQKNLVLILDEVDEIF
QYPEITKDFCGMLRHWYEESNNVKIWKNLRIVIAYSTEYHGKLDIYQSPFNVGSSIELKEFTKEEVTRLIFLYQLDPKIV
TDLMSMVGGHPYLIRLALYRMSQEELTIEKFLKEAPTDSGIYRDHFSRHLETIDKRSKIKTVFQEILKANEPVSFSDKNR
EVRQLEAMGLIKIEGNKAKTGCQLYQKYFGEFLLGIRF

Sequences:

>Translated_438_residues
MNKEIFEYIYSSQLTKNDEKTLKLLFANKQRKEIAKALKCVETNVSHKFKAIAKKFNYLESNQNCKATEYLVKIFSQYKP
DMVDQQLIKSYASYPILMPDKPEEPDSPFYIERHQIPRRSVESQCYETIERPGSLIRIKAPKKMGKTSLINQIQAKANDN
NYISQYLRFDLLIEPPNISSVNNFIKAFNKIIKSRFPDVSKGSNWDNNNAKISCTKDLKSLLLNLQKNLVLILDEVDEIF
QYPEITKDFCGMLRHWYEESNNVKIWKNLRIVIAYSTEYHGKLDIYQSPFNVGSSIELKEFTKEEVTRLIFLYQLDPKIV
TDLMSMVGGHPYLIRLALYRMSQEELTIEKFLKEAPTDSGIYRDHFSRHLETIDKRSKIKTVFQEILKANEPVSFSDKNR
EVRQLEAMGLIKIEGNKAKTGCQLYQKYFGEFLLGIRF
>Mature_438_residues
MNKEIFEYIYSSQLTKNDEKTLKLLFANKQRKEIAKALKCVETNVSHKFKAIAKKFNYLESNQNCKATEYLVKIFSQYKP
DMVDQQLIKSYASYPILMPDKPEEPDSPFYIERHQIPRRSVESQCYETIERPGSLIRIKAPKKMGKTSLINQIQAKANDN
NYISQYLRFDLLIEPPNISSVNNFIKAFNKIIKSRFPDVSKGSNWDNNNAKISCTKDLKSLLLNLQKNLVLILDEVDEIF
QYPEITKDFCGMLRHWYEESNNVKIWKNLRIVIAYSTEYHGKLDIYQSPFNVGSSIELKEFTKEEVTRLIFLYQLDPKIV
TDLMSMVGGHPYLIRLALYRMSQEELTIEKFLKEAPTDSGIYRDHFSRHLETIDKRSKIKTVFQEILKANEPVSFSDKNR
EVRQLEAMGLIKIEGNKAKTGCQLYQKYFGEFLLGIRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51258; Mature: 51258

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEIFEYIYSSQLTKNDEKTLKLLFANKQRKEIAKALKCVETNVSHKFKAIAKKFNYLE
CCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
SNQNCKATEYLVKIFSQYKPDMVDQQLIKSYASYPILMPDKPEEPDSPFYIERHQIPRRS
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCCCCEEEECCCCCHHH
VESQCYETIERPGSLIRIKAPKKMGKTSLINQIQAKANDNNYISQYLRFDLLIEPPNISS
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCHH
VNNFIKAFNKIIKSRFPDVSKGSNWDNNNAKISCTKDLKSLLLNLQKNLVLILDEVDEIF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEHHHHHHHH
QYPEITKDFCGMLRHWYEESNNVKIWKNLRIVIAYSTEYHGKLDIYQSPFNVGSSIELKE
CCCCHHHHHHHHHHHHHHCCCCEEEEECEEEEEEECCCCCCEEEEEECCCCCCCCCHHHH
FTKEEVTRLIFLYQLDPKIVTDLMSMVGGHPYLIRLALYRMSQEELTIEKFLKEAPTDSG
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
IYRDHFSRHLETIDKRSKIKTVFQEILKANEPVSFSDKNREVRQLEAMGLIKIEGNKAKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEECCCCCHH
GCQLYQKYFGEFLLGIRF
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKEIFEYIYSSQLTKNDEKTLKLLFANKQRKEIAKALKCVETNVSHKFKAIAKKFNYLE
CCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
SNQNCKATEYLVKIFSQYKPDMVDQQLIKSYASYPILMPDKPEEPDSPFYIERHQIPRRS
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCCCCCCEEEECCCCCHHH
VESQCYETIERPGSLIRIKAPKKMGKTSLINQIQAKANDNNYISQYLRFDLLIEPPNISS
HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCHH
VNNFIKAFNKIIKSRFPDVSKGSNWDNNNAKISCTKDLKSLLLNLQKNLVLILDEVDEIF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEHHHHHHHH
QYPEITKDFCGMLRHWYEESNNVKIWKNLRIVIAYSTEYHGKLDIYQSPFNVGSSIELKE
CCCCHHHHHHHHHHHHHHCCCCEEEEECEEEEEEECCCCCCEEEEEECCCCCCCCCHHHH
FTKEEVTRLIFLYQLDPKIVTDLMSMVGGHPYLIRLALYRMSQEELTIEKFLKEAPTDSG
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
IYRDHFSRHLETIDKRSKIKTVFQEILKANEPVSFSDKNREVRQLEAMGLIKIEGNKAKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEECCCCCHH
GCQLYQKYFGEFLLGIRF
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA