| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is fbpB2 [H]
Identifier: 110835457
GI number: 110835457
Start: 2939080
End: 2940654
Strand: Reverse
Name: fbpB2 [H]
Synonym: ABO_2596
Alternate gene names: 110835457
Gene position: 2940654-2939080 (Counterclockwise)
Preceding gene: 110835458
Following gene: 110835456
Centisome position: 94.25
GC content: 60.63
Gene sequence:
>1575_bases GTGATGCGGCGCGGCGGGGTTTCGTGCAGTGGGGCCAGCGTGATTGCGCTGGCCCTGTTGGTTGTGGTGCCTATTCTGGT GTTGCTCGCTGCCTGGCGACAACAAGAGTGGGCTACCTGGCAGCACCTGATGGATACGGTGCTGCTACGCCTGATTGGGA ATACCTTGTTCCTGATGGTGGGTGTGGCTATTGGCGTTTCGCTGCTGGGCATTACTCTGGCTTGGTGTATGGCGACCTTG GAGTTTCCAGGTCGTCGCTGGCTGCAATGGGCCGTGTTGCTGCCCATGGCCATGCCGGCGTATGTGCTGGCATTCGTGTT GGTGGATCTGCTCGATTACGCCGGGCCGATACAAACCCAGGTGCGCGCCTGGTGGCCGGCCTTTCCCGGGTTCAGTGCCC GCCACCCCCTGTGGGTCGTGGTCACTCTTTCTCTGGTGCTTTACCCCTACGTGTACATGCTGGCGCGGTTGGCTTTTCAG GCTCAGGGGCGTGCTGTGCTGGAACAGGCGCGCATTCTTGGTGATGGCCCGCTACGGGCGTTTTTCAAGGTGGCGCTGCC CATGGCCCGGCCGGGCATTGCTGCAGGGTTGGCGCTGGCCTTGATGGAAACCCTGGCCGATTTCGGCGCGGTGTCGGTGT TTAATTTCGATACCTTTACCACCGCCATCTATAAGAGCTGGTACGGCTTGTTTAATTTGCAGGCGGCGGCGCAGCTGGCC TCCTTGCTACTGCTGTTTGTGCTGGTGTCATTGTGGCTGGAGCGCCGTGGCCGGCGCCGGGCCCGGTTTAGTGAGCTGGG TGGCCGGCAAATAATGCGGGTGCGGCCGCGTTTTGCCTGGGGCATTTCGGTGTTCGCCTTTGCTGTGTTGTTCATGGCAT TCCTGCTGCCGGTGAGCCGGCTGTTGTATTGGGTGGTGGGCACCGGTATCGAAGGCTTGGATAGCCGCTTTGTCAGCCTC ATCTGGCGTACTTTTTTGCTGGGTGCTATGGCGGCTTCATTGATTTTGGTGTTGGCCGGCTGGCTGGCTTGGGTGAAGCG TCACCAGCCCTCTCGGGTGGTCTCGGGCTCGGTGCAGTTGGCGACGTTGGGCTATGCCTTGCCTGGGTCAGTGCTGGCGG TCGGCATCATGGTCAGCTTCAGTGCCGTGGAGGCTTGGCTGGATCAATGGGGTGTATCGATTCCGCTGGCGGGCGGGCTG GCGGCGTTGGTGCTTGCCTATGTGGTGCGTTTCCTGGCAGTGGCCTTTGGTCCAGTGGAAAATGCCCTGCAACAGGTGCG GCCCAGTTTGGTGGAAGCTGCCCGTACCCTCGGTGCTAGCGCATCAGAGGTGGGTCGCCGGGTCTATCTGCCGATGATGT TGCCGGGGTTGTTTACCGCTTTGCTGCTAGTGGGCATTGATGTGATGAAGGAAATGCCTGCTACCCTTCTATTGCGGCCC TTTGGCTGGGATACCTTAGCGGTGCGCATTTACGAACTGACGGCAGAAGGTGAGTGGCAGCGAGCCGCAGCGCCGTCGTT AACCTTGGTGTTGTTGGGGTTAGTGCCCGTCATTGTGCTGAGTCGGCGCCGTTGA
Upstream 100 bases:
>100_bases ATGGGGTGAGTTCAAGGCCGATGATCTCAACGTCAGTGTCGCCGGTGCCCTACAGGTCGAGGCGGTGAAACTGATGGACC GCGCAGGGTATCGCTAAGCG
Downstream 100 bases:
>100_bases ATGTTGCTTCTCCTAGCAGAAGTATTCTCTTCAGGGCGGGGTTATTTGCTCGCTATTTTAAAGAATTTTACGTTTCCTCG CCGTTATTAACGATAAATGA
Product: Fe-ABC transporter permease
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MMRRGGVSCSGASVIALALLVVVPILVLLAAWRQQEWATWQHLMDTVLLRLIGNTLFLMVGVAIGVSLLGITLAWCMATL EFPGRRWLQWAVLLPMAMPAYVLAFVLVDLLDYAGPIQTQVRAWWPAFPGFSARHPLWVVVTLSLVLYPYVYMLARLAFQ AQGRAVLEQARILGDGPLRAFFKVALPMARPGIAAGLALALMETLADFGAVSVFNFDTFTTAIYKSWYGLFNLQAAAQLA SLLLLFVLVSLWLERRGRRRARFSELGGRQIMRVRPRFAWGISVFAFAVLFMAFLLPVSRLLYWVVGTGIEGLDSRFVSL IWRTFLLGAMAASLILVLAGWLAWVKRHQPSRVVSGSVQLATLGYALPGSVLAVGIMVSFSAVEAWLDQWGVSIPLAGGL AALVLAYVVRFLAVAFGPVENALQQVRPSLVEAARTLGASASEVGRRVYLPMMLPGLFTALLLVGIDVMKEMPATLLLRP FGWDTLAVRIYELTAEGEWQRAAAPSLTLVLLGLVPVIVLSRRR
Sequences:
>Translated_524_residues MMRRGGVSCSGASVIALALLVVVPILVLLAAWRQQEWATWQHLMDTVLLRLIGNTLFLMVGVAIGVSLLGITLAWCMATL EFPGRRWLQWAVLLPMAMPAYVLAFVLVDLLDYAGPIQTQVRAWWPAFPGFSARHPLWVVVTLSLVLYPYVYMLARLAFQ AQGRAVLEQARILGDGPLRAFFKVALPMARPGIAAGLALALMETLADFGAVSVFNFDTFTTAIYKSWYGLFNLQAAAQLA SLLLLFVLVSLWLERRGRRRARFSELGGRQIMRVRPRFAWGISVFAFAVLFMAFLLPVSRLLYWVVGTGIEGLDSRFVSL IWRTFLLGAMAASLILVLAGWLAWVKRHQPSRVVSGSVQLATLGYALPGSVLAVGIMVSFSAVEAWLDQWGVSIPLAGGL AALVLAYVVRFLAVAFGPVENALQQVRPSLVEAARTLGASASEVGRRVYLPMMLPGLFTALLLVGIDVMKEMPATLLLRP FGWDTLAVRIYELTAEGEWQRAAAPSLTLVLLGLVPVIVLSRRR >Mature_524_residues MMRRGGVSCSGASVIALALLVVVPILVLLAAWRQQEWATWQHLMDTVLLRLIGNTLFLMVGVAIGVSLLGITLAWCMATL EFPGRRWLQWAVLLPMAMPAYVLAFVLVDLLDYAGPIQTQVRAWWPAFPGFSARHPLWVVVTLSLVLYPYVYMLARLAFQ AQGRAVLEQARILGDGPLRAFFKVALPMARPGIAAGLALALMETLADFGAVSVFNFDTFTTAIYKSWYGLFNLQAAAQLA SLLLLFVLVSLWLERRGRRRARFSELGGRQIMRVRPRFAWGISVFAFAVLFMAFLLPVSRLLYWVVGTGIEGLDSRFVSL IWRTFLLGAMAASLILVLAGWLAWVKRHQPSRVVSGSVQLATLGYALPGSVLAVGIMVSFSAVEAWLDQWGVSIPLAGGL AALVLAYVVRFLAVAFGPVENALQQVRPSLVEAARTLGASASEVGRRVYLPMMLPGLFTALLLVGIDVMKEMPATLLLRP FGWDTLAVRIYELTAEGEWQRAAAPSLTLVLLGLVPVIVLSRRR
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=203, Percent_Identity=30.5418719211823, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 57537; Mature: 57537
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRGGVSCSGASVIALALLVVVPILVLLAAWRQQEWATWQHLMDTVLLRLIGNTLFLMV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVAIGVSLLGITLAWCMATLEFPGRRWLQWAVLLPMAMPAYVLAFVLVDLLDYAGPIQTQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VRAWWPAFPGFSARHPLWVVVTLSLVLYPYVYMLARLAFQAQGRAVLEQARILGDGPLRA HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH FFKVALPMARPGIAAGLALALMETLADFGAVSVFNFDTFTTAIYKSWYGLFNLQAAAQLA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SLLLLFVLVSLWLERRGRRRARFSELGGRQIMRVRPRFAWGISVFAFAVLFMAFLLPVSR HHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LLYWVVGTGIEGLDSRFVSLIWRTFLLGAMAASLILVLAGWLAWVKRHQPSRVVSGSVQL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEH ATLGYALPGSVLAVGIMVSFSAVEAWLDQWGVSIPLAGGLAALVLAYVVRFLAVAFGPVE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHH NALQQVRPSLVEAARTLGASASEVGRRVYLPMMLPGLFTALLLVGIDVMKEMPATLLLRP HHHHHHHHHHHHHHHHHCCCHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECC FGWDTLAVRIYELTAEGEWQRAAAPSLTLVLLGLVPVIVLSRRR CCCHHHHHEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMRRGGVSCSGASVIALALLVVVPILVLLAAWRQQEWATWQHLMDTVLLRLIGNTLFLMV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVAIGVSLLGITLAWCMATLEFPGRRWLQWAVLLPMAMPAYVLAFVLVDLLDYAGPIQTQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VRAWWPAFPGFSARHPLWVVVTLSLVLYPYVYMLARLAFQAQGRAVLEQARILGDGPLRA HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH FFKVALPMARPGIAAGLALALMETLADFGAVSVFNFDTFTTAIYKSWYGLFNLQAAAQLA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SLLLLFVLVSLWLERRGRRRARFSELGGRQIMRVRPRFAWGISVFAFAVLFMAFLLPVSR HHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LLYWVVGTGIEGLDSRFVSLIWRTFLLGAMAASLILVLAGWLAWVKRHQPSRVVSGSVQL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEH ATLGYALPGSVLAVGIMVSFSAVEAWLDQWGVSIPLAGGLAALVLAYVVRFLAVAFGPVE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHH NALQQVRPSLVEAARTLGASASEVGRRVYLPMMLPGLFTALLLVGIDVMKEMPATLLLRP HHHHHHHHHHHHHHHHHCCCHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECC FGWDTLAVRIYELTAEGEWQRAAAPSLTLVLLGLVPVIVLSRRR CCCHHHHHEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]