| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835451
Identifier: 110835451
GI number: 110835451
Start: 2929489
End: 2930052
Strand: Reverse
Name: 110835451
Synonym: ABO_2590
Alternate gene names: NA
Gene position: 2930052-2929489 (Counterclockwise)
Preceding gene: 110835452
Following gene: 110835450
Centisome position: 93.91
GC content: 36.52
Gene sequence:
>564_bases ATGGAAAGTAAACAAAAAATGGTAATAAGTTGGATTTTATTTTGGACTTTTTTGGTGGTGTTCGTCCTCTTCTGCTTAGG CACTTTAGCAATGTTGTTTCTGGGTTTTGGAGAGGTTCAAGAAACTGAGAGGCCTACGCTGATAAATATTCTTATTGGTG AAATTTCCGTTGGCTTGTTAACCTTATTTTATTCGGTATTTAATCTAAAAAAAAGCGCTGAAAATACAACTGTCGACAAC GATGAGTTAAATCGTTTAAAAGCCCTGATGGTTTCAAAGGACAATGAAATTTCAAGCTTAAAGTCAAAGCTAGAAAAAGA AAAAAGTAGAAACTGTCAATACTCTACATTAAGCGAATATAGGGATACTATTAAGGGGCTCTGTTCGCCCTTAACTGACA CAAAACTAGAAGACCTGATTAAAAAGCTTGGGCTAGATAATGACAATATGAGCCAAGAACGTCAGAAAGTGTTTGCAGAA ATTGGCTTGATGAAAGAGCAGGGAATTCTGGTAAATCATAACCCTCTCGATCCTGATGCGGTTCGCCTAGCAAAAAATGC ATAA
Upstream 100 bases:
>100_bases GTTTATCGGAATTATATACGATGGCCTTTTAAGAAATATGTCGAAAAAAGATATGTCGAATCGTTCGACTGAATACGCTG TTATGCATTAAAGAGGAAGC
Downstream 100 bases:
>100_bases CAAGGCGCTGCTACGGAAAGTTTGCTCGCTGTGACTCGAAAATTTCCGCAGAGCGCGGCGTTATGTGCAAATAGTGAAAG GAGAATAAATTGAGTTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MESKQKMVISWILFWTFLVVFVLFCLGTLAMLFLGFGEVQETERPTLINILIGEISVGLLTLFYSVFNLKKSAENTTVDN DELNRLKALMVSKDNEISSLKSKLEKEKSRNCQYSTLSEYRDTIKGLCSPLTDTKLEDLIKKLGLDNDNMSQERQKVFAE IGLMKEQGILVNHNPLDPDAVRLAKNA
Sequences:
>Translated_187_residues MESKQKMVISWILFWTFLVVFVLFCLGTLAMLFLGFGEVQETERPTLINILIGEISVGLLTLFYSVFNLKKSAENTTVDN DELNRLKALMVSKDNEISSLKSKLEKEKSRNCQYSTLSEYRDTIKGLCSPLTDTKLEDLIKKLGLDNDNMSQERQKVFAE IGLMKEQGILVNHNPLDPDAVRLAKNA >Mature_187_residues MESKQKMVISWILFWTFLVVFVLFCLGTLAMLFLGFGEVQETERPTLINILIGEISVGLLTLFYSVFNLKKSAENTTVDN DELNRLKALMVSKDNEISSLKSKLEKEKSRNCQYSTLSEYRDTIKGLCSPLTDTKLEDLIKKLGLDNDNMSQERQKVFAE IGLMKEQGILVNHNPLDPDAVRLAKNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21227; Mature: 21227
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESKQKMVISWILFWTFLVVFVLFCLGTLAMLFLGFGEVQETERPTLINILIGEISVGLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHH TLFYSVFNLKKSAENTTVDNDELNRLKALMVSKDNEISSLKSKLEKEKSRNCQYSTLSEY HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH RDTIKGLCSPLTDTKLEDLIKKLGLDNDNMSQERQKVFAEIGLMKEQGILVNHNPLDPDA HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHH VRLAKNA HHHHCCC >Mature Secondary Structure MESKQKMVISWILFWTFLVVFVLFCLGTLAMLFLGFGEVQETERPTLINILIGEISVGLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHH TLFYSVFNLKKSAENTTVDNDELNRLKALMVSKDNEISSLKSKLEKEKSRNCQYSTLSEY HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH RDTIKGLCSPLTDTKLEDLIKKLGLDNDNMSQERQKVFAEIGLMKEQGILVNHNPLDPDA HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHH VRLAKNA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA