Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835443

Identifier: 110835443

GI number: 110835443

Start: 2922380

End: 2922808

Strand: Reverse

Name: 110835443

Synonym: ABO_2582

Alternate gene names: NA

Gene position: 2922808-2922380 (Counterclockwise)

Preceding gene: 110835444

Following gene: 110835440

Centisome position: 93.68

GC content: 58.51

Gene sequence:

>429_bases
GTGATTTCAGGTTCAACTATAAAAAAACAAGAGGGACCCACCATGAAGCGAGCAAAGCGCCCGGTTGCGGCATCTGTACT
CGCCTCCGCCATGCTGTTTGCTGCCATGGTGCCTATTACGGCACAGGCGGCGGAATCTAAGCTGGATCGTCCGGGAGAGA
TAGCAATGATCGGCGATGCGATTTTTGCGCGTCCGTTGCTGTTGGCTTCCACGGTGGTGGGCGCGGGCCTGTACGTGGTT
ACGCTGCCGTTCAGCCTGCTGGGGGGGAACCCAGGGGAGGCGGCGGAAGTGCTGGTGATGAACCCTGGAAAGAATACTTT
CGTCCGTTGTTTGGGCTGTACGCCGGCTCAGCACGAAAGCCTGAAAGCGGAAAAAGAGATGCGCAACAACGCCAAGCAGG
AGCAGGGCGCGGTGGCCAACGCTCAGTAG

Upstream 100 bases:

>100_bases
ACTATTGCTGGCCTAAGAACAAGGGTGTAGATTGTGATGCAATTGTCGGAATATTAAAGGCTTAGCTGAAACAATGTCAG
CGATACTTTAACTTGAAACG

Downstream 100 bases:

>100_bases
TTTCCTGCCCATTGCCGATGTTCGTATCGCGAAAGGCTAAGGCCTGGGCTATGCTAGAGCCTTAAGCTAGTGCCTTAAAG
CAAAAGCCCCGTAGCACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MISGSTIKKQEGPTMKRAKRPVAASVLASAMLFAAMVPITAQAAESKLDRPGEIAMIGDAIFARPLLLASTVVGAGLYVV
TLPFSLLGGNPGEAAEVLVMNPGKNTFVRCLGCTPAQHESLKAEKEMRNNAKQEQGAVANAQ

Sequences:

>Translated_142_residues
MISGSTIKKQEGPTMKRAKRPVAASVLASAMLFAAMVPITAQAAESKLDRPGEIAMIGDAIFARPLLLASTVVGAGLYVV
TLPFSLLGGNPGEAAEVLVMNPGKNTFVRCLGCTPAQHESLKAEKEMRNNAKQEQGAVANAQ
>Mature_142_residues
MISGSTIKKQEGPTMKRAKRPVAASVLASAMLFAAMVPITAQAAESKLDRPGEIAMIGDAIFARPLLLASTVVGAGLYVV
TLPFSLLGGNPGEAAEVLVMNPGKNTFVRCLGCTPAQHESLKAEKEMRNNAKQEQGAVANAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14807; Mature: 14807

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGSTIKKQEGPTMKRAKRPVAASVLASAMLFAAMVPITAQAAESKLDRPGEIAMIGDA
CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHH
IFARPLLLASTVVGAGLYVVTLPFSLLGGNPGEAAEVLVMNPGKNTFVRCLGCTPAQHES
HHHHHHHHHHHHHHCCHHHEEHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHH
LKAEKEMRNNAKQEQGAVANAQ
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MISGSTIKKQEGPTMKRAKRPVAASVLASAMLFAAMVPITAQAAESKLDRPGEIAMIGDA
CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHH
IFARPLLLASTVVGAGLYVVTLPFSLLGGNPGEAAEVLVMNPGKNTFVRCLGCTPAQHES
HHHHHHHHHHHHHHCCHHHEEHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHH
LKAEKEMRNNAKQEQGAVANAQ
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA