| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835435
Identifier: 110835435
GI number: 110835435
Start: 2914784
End: 2915401
Strand: Reverse
Name: 110835435
Synonym: ABO_2574
Alternate gene names: NA
Gene position: 2915401-2914784 (Counterclockwise)
Preceding gene: 110835436
Following gene: 110835426
Centisome position: 93.44
GC content: 48.38
Gene sequence:
>618_bases ATGAAAAAATATTTAGCGGTTATGGCGTTAGGTTTGCTGGCGAGTTCGGCGTGGGGGGAGGCTAAACCGTCGGGTTTTAT GCTTGGTGCTGGTGTGTCGTTCGATACAAGTAATTTTGCAGATGAGATTGAAGATCAACTGGACAGGACGGGGCCAGGTT ACAGTGTTGACGATGACGGAGCAGCAACAGGGAAGGACATTTACCTGGGTTATGCCTTTGGCGGGGCGTCTTCATTGAGG CTGGGTTACAAATGGTTTGGTAGTCAAGAAGGTGAGGTCCACCAGTATGGCGTCAAGACCGGTGAATACGAAGTCGATGC CGATGGTATGTATATGGCCGCAGATTTATTGTTTCCGCTGAGCGAGACGTTTTTTCTGGGTGGTACTTTGGGTATCCAGA ATTGGGATGGTGAGGTGACAGCAAGAAACCCGTTGTCTTCTATGAAGTCGTCATCGGATGGCCGGGACTTTTTCTATGGC GTGCGAGCCAAATTCCTTTTCAATGAAAAGCGAGGCGGTGTCGTGATCGGCTATAACCGATATAGCTTTGAAGATGAGAA CGGTGATGATCTGGAATACGATAGCTTGCAGATTGGCTTGGAAGGCTATTTCTACTAA
Upstream 100 bases:
>100_bases AGGATGTGTAATTAGTCTCTTAAGGTTTAGTTGGTGTCTTTACGCATAAGAAAAAATAATTAGGATTGAGGTCTGTTTAT CCATTGGGGAGAACGTGTAA
Downstream 100 bases:
>100_bases GGGTGAATAAAGAAAAACCGCAGCCTTAGCTGCGGTTTTTTATGACCGTGTTTAAGCTGAATGCGTTTCTGTTAAGCCCT TTTCTCGAATAATAAATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKKYLAVMALGLLASSAWGEAKPSGFMLGAGVSFDTSNFADEIEDQLDRTGPGYSVDDDGAATGKDIYLGYAFGGASSLR LGYKWFGSQEGEVHQYGVKTGEYEVDADGMYMAADLLFPLSETFFLGGTLGIQNWDGEVTARNPLSSMKSSSDGRDFFYG VRAKFLFNEKRGGVVIGYNRYSFEDENGDDLEYDSLQIGLEGYFY
Sequences:
>Translated_205_residues MKKYLAVMALGLLASSAWGEAKPSGFMLGAGVSFDTSNFADEIEDQLDRTGPGYSVDDDGAATGKDIYLGYAFGGASSLR LGYKWFGSQEGEVHQYGVKTGEYEVDADGMYMAADLLFPLSETFFLGGTLGIQNWDGEVTARNPLSSMKSSSDGRDFFYG VRAKFLFNEKRGGVVIGYNRYSFEDENGDDLEYDSLQIGLEGYFY >Mature_205_residues MKKYLAVMALGLLASSAWGEAKPSGFMLGAGVSFDTSNFADEIEDQLDRTGPGYSVDDDGAATGKDIYLGYAFGGASSLR LGYKWFGSQEGEVHQYGVKTGEYEVDADGMYMAADLLFPLSETFFLGGTLGIQNWDGEVTARNPLSSMKSSSDGRDFFYG VRAKFLFNEKRGGVVIGYNRYSFEDENGDDLEYDSLQIGLEGYFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22430; Mature: 22430
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLAVMALGLLASSAWGEAKPSGFMLGAGVSFDTSNFADEIEDQLDRTGPGYSVDDDG CHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC AATGKDIYLGYAFGGASSLRLGYKWFGSQEGEVHQYGVKTGEYEVDADGMYMAADLLFPL CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCCEEECCCCEEEEEHHHHCC SETFFLGGTLGIQNWDGEVTARNPLSSMKSSSDGRDFFYGVRAKFLFNEKRGGVVIGYNR CCCEEECCEEECCCCCCCEEECCCHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEEEECC YSFEDENGDDLEYDSLQIGLEGYFY EECCCCCCCCCEECEEEEEEEEECC >Mature Secondary Structure MKKYLAVMALGLLASSAWGEAKPSGFMLGAGVSFDTSNFADEIEDQLDRTGPGYSVDDDG CHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC AATGKDIYLGYAFGGASSLRLGYKWFGSQEGEVHQYGVKTGEYEVDADGMYMAADLLFPL CCCCCEEEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCCEEECCCCEEEEEHHHHCC SETFFLGGTLGIQNWDGEVTARNPLSSMKSSSDGRDFFYGVRAKFLFNEKRGGVVIGYNR CCCEEECCEEECCCCCCCEEECCCHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEEEECC YSFEDENGDDLEYDSLQIGLEGYFY EECCCCCCCCCEECEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA