| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is nahD
Identifier: 110835262
GI number: 110835262
Start: 2723428
End: 2723652
Strand: Reverse
Name: nahD
Synonym: ABO_2401
Alternate gene names: NA
Gene position: 2723652-2723428 (Counterclockwise)
Preceding gene: 110835263
Following gene: 110835261
Centisome position: 87.29
GC content: 52.89
Gene sequence:
>225_bases TTGTCGGACGCGAACGAAATCACCTGCGGGCTCAACGAGGCGGGTCTGGATGCGCAAGTCTGGCTGGATCAAGCTGATAC CGGCGAAGTGAAAGAGAAGCTCAAGCTGAACACTGAGGCCGCCGTCAAACGTGGATTGTTCGGCGCACCGACGATGTTCG TGGGCAACGAAATGTTCTTCGGACAGGGTCGACTGGATTTTGTTGAAGAAGAAGTAAAAAAATAG
Upstream 100 bases:
>100_bases GTGCCGACCCGGCTCACAGTTGGCTGCGCCAACGGGTGCTGGCGCAACTGGAAGTCATGCAAAACGACATTCAGCTCAGC GCCTCTGCTGTGTAGAGGCT
Downstream 100 bases:
>100_bases CTGTAAGGAAAAGCCTGGGACCCTAAGAGATGTTTCGGGCTTTTTTATGTGCTTGAAGCTGTCGCCTTCCTCTTCATCAA ATTAAGCATGGACTATATGG
Product: 2-hydroxychromene carboxylate isomerase
Products: NA
Alternate protein names: 2-Hydroxychromene-2-Carboxylate Isomerase; DSBA-Like Thioredoxin Domain Protein; 2-Hydroxychromene Carboxylate Isomerase
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MSDANEITCGLNEAGLDAQVWLDQADTGEVKEKLKLNTEAAVKRGLFGAPTMFVGNEMFFGQGRLDFVEEEVKK
Sequences:
>Translated_74_residues MSDANEITCGLNEAGLDAQVWLDQADTGEVKEKLKLNTEAAVKRGLFGAPTMFVGNEMFFGQGRLDFVEEEVKK >Mature_73_residues SDANEITCGLNEAGLDAQVWLDQADTGEVKEKLKLNTEAAVKRGLFGAPTMFVGNEMFFGQGRLDFVEEEVKK
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8139; Mature: 8008
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDANEITCGLNEAGLDAQVWLDQADTGEVKEKLKLNTEAAVKRGLFGAPTMFVGNEMFF CCCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHCCCCCCCCEEECCEEEE GQGRLDFVEEEVKK CCCCCHHHHHHHCC >Mature Secondary Structure SDANEITCGLNEAGLDAQVWLDQADTGEVKEKLKLNTEAAVKRGLFGAPTMFVGNEMFF CCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHCCCHHHHHCCCCCCCCEEECCEEEE GQGRLDFVEEEVKK CCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA