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The map label for this gene is yjbQ [H]

Identifier: 110835251

GI number: 110835251

Start: 2713028

End: 2713447

Strand: Reverse

Name: yjbQ [H]

Synonym: ABO_2390

Alternate gene names: 110835251

Gene position: 2713447-2713028 (Counterclockwise)

Preceding gene: 110835252

Following gene: 110835246

Centisome position: 86.97

GC content: 55.95

Gene sequence:

>420_bases
ATGTGGAAACAGAGCAACATCACTCTCACCGCTAAACGGCGTGGCTGCCATTTGGTGACCCGTGAAGTGTTGGAGCAGCT
GCCGGAGTTGGCTGAGCTAGAGATAGGCTTGCTGCACCTGTTTATTCAGCACACTTCTGCATCGCTCACCGTGAATGAAA
ATGCGGACCCGGATGTGCGCGGTGATCTTGAGCGGCACCTGAATGTAATGGTGCCGGAGAACGCGCCGTATTATGAGCAC
ACTCTGGAAGGGCCGGATGACATGCCGGCGCACATTAAGAGCGTACTGATAGGCCCTTCATTGAGCTTGCCTATTAGTAA
CGGGCGGCTGGCGCTAGGCACGTGGCAGGGTATTTACCTGTGCGAACATCGCGATAACGCTGGCACAAGGCGGCTAGTGG
CGACGATTCAGGGGGAGTGA

Upstream 100 bases:

>100_bases
AGTCTGTCGTGTTCAGCATTAGGCGCTAGGGTCTAAGGCCTGCGCGGGCTTTCAGGCCGGCCATGCAAAAGGCTTTTTAA
CCGCCAGCGAGGGAACGACG

Downstream 100 bases:

>100_bases
CTCGCCGAGCCTGAAGGAGCCTTGTGTGGGTAAGGCGCGGGCAAGGCGCGGGCGGTGCCGCTTGCCTGCCCGCGTGAACG
CATGCGGTGTTGGGTTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MWKQSNITLTAKRRGCHLVTREVLEQLPELAELEIGLLHLFIQHTSASLTVNENADPDVRGDLERHLNVMVPENAPYYEH
TLEGPDDMPAHIKSVLIGPSLSLPISNGRLALGTWQGIYLCEHRDNAGTRRLVATIQGE

Sequences:

>Translated_139_residues
MWKQSNITLTAKRRGCHLVTREVLEQLPELAELEIGLLHLFIQHTSASLTVNENADPDVRGDLERHLNVMVPENAPYYEH
TLEGPDDMPAHIKSVLIGPSLSLPISNGRLALGTWQGIYLCEHRDNAGTRRLVATIQGE
>Mature_139_residues
MWKQSNITLTAKRRGCHLVTREVLEQLPELAELEIGLLHLFIQHTSASLTVNENADPDVRGDLERHLNVMVPENAPYYEH
TLEGPDDMPAHIKSVLIGPSLSLPISNGRLALGTWQGIYLCEHRDNAGTRRLVATIQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=139, Percent_Identity=58.9928057553957, Blast_Score=172, Evalue=1e-44,
Organism=Drosophila melanogaster, GI221476594, Length=137, Percent_Identity=58.3941605839416, Blast_Score=177, Evalue=2e-45,
Organism=Drosophila melanogaster, GI221476589, Length=137, Percent_Identity=58.3941605839416, Blast_Score=176, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15525; Mature: 15525

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKQSNITLTAKRRGCHLVTREVLEQLPELAELEIGLLHLFIQHTSASLTVNENADPDVR
CCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCC
GDLERHLNVMVPENAPYYEHTLEGPDDMPAHIKSVLIGPSLSLPISNGRLALGTWQGIYL
CCHHHCEEEEECCCCCCCEEECCCCCCCHHHHHHEEECCCCCCEECCCEEEEEECCEEEE
CEHRDNAGTRRLVATIQGE
EECCCCCCCEEEEEEEECC
>Mature Secondary Structure
MWKQSNITLTAKRRGCHLVTREVLEQLPELAELEIGLLHLFIQHTSASLTVNENADPDVR
CCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCC
GDLERHLNVMVPENAPYYEHTLEGPDDMPAHIKSVLIGPSLSLPISNGRLALGTWQGIYL
CCHHHCEEEEECCCCCCCEEECCCCCCCHHHHHHEEECCCCCCEECCCEEEEEECCEEEE
CEHRDNAGTRRLVATIQGE
EECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]