| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835212
Identifier: 110835212
GI number: 110835212
Start: 2675184
End: 2676161
Strand: Direct
Name: 110835212
Synonym: ABO_2351
Alternate gene names: NA
Gene position: 2675184-2676161 (Clockwise)
Preceding gene: 110835211
Following gene: 110835214
Centisome position: 85.74
GC content: 58.69
Gene sequence:
>978_bases TTGCTTATGCGTTTTCTATTGATGGCTTTGCTAACCAGCCTGCTATTGGCCTGTGACAGCAGTATCGATGAACACGCTGA CACAACACCCGGGCCGACCAGCGCCACCGACCTAGTAGAGATTCCTGCCGCACAGTGGCAACAAAGGGCCGATGAACGCT TTACTACCGCCGCCACAGAATGGCAGCAGGCGTTGGCTCAGTTTGAGCGAATCCCTGATCAACAACACCTGGCCGCTCTG CGCCAAGCGCTGTCCCATTGGTATCAGCGCTTTACCAGCCAATACTTATTACTAGCCAGCCGCGCCTGCCAACAAGACGG ACGTGCCCGTCACCAAGTCAACCTCACTCAGCTGGACAGCTGGCCACTGTACCCTGGCTACTTGGACGTCTTACCTCAAT GGCCGGAGTCTGGCTTAATCAGCGACCCAAGCCTAGAGCTGACCCGCCAGAGCCTGCGGCGCCAGCACGGCGCCACCGAT CCAGCGGAAGCCAGCCTCGGTTTTGCCGCCATGGCAGTGGTACTCAACGGCACTGCCGAGGCTCCCAAAGCGCTGGATTC CTTCATCGGCCAAAAGGGCGCGCCGGCTCGGCGCCGCCAATATCTGAAGCTCGCCGGTGAGCAATTGGTGGCCGACCACC AGCAGCTATCGTTGAATCGGCCGCTGAATCAGCTAGCGCTGCAATGCGGCCTGACAGGAGTCCTGGCTCACTGGCAGCCA TTGAGCAACTCAACCGATGAACAAGAAAGCGGGCTACTAATTCCCGAACTTAGCGCTGCCCTCAATAGCACCAACCTGCT TGCGGGCGTGCAGACCATGGACCCCGACACATTGGCCCGCTGGGATCAGATCAACCCGGGCATTGCCGATGCTATCAAGC ACAGCGAAGAAAAGGGCTGGGCTCCGATCCAAGCCTGGCTCAGCACAGTGAGTTTCACCCGCCCGCTACCTGACACAAGC AAAAGTAGGTCGAGTTAA
Upstream 100 bases:
>100_bases ACGTAAAGTAGACAACCCGGTAGCCGTGGACCCAGACAGCACTCTTGAGCGTGAGGCTCGGGAACAGGGCTGGCCCATTA TCAGCCTGCGTTAATCCGGA
Downstream 100 bases:
>100_bases TCTCAAAGGAATAATGCGACGTCCAGCACCAAGATAGCCCCCGGCTTACGGCCTTAGACGCCAGTGCCTTCGGCTAAAAT CGGCCCACGAAACTGAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MLMRFLLMALLTSLLLACDSSIDEHADTTPGPTSATDLVEIPAAQWQQRADERFTTAATEWQQALAQFERIPDQQHLAAL RQALSHWYQRFTSQYLLLASRACQQDGRARHQVNLTQLDSWPLYPGYLDVLPQWPESGLISDPSLELTRQSLRRQHGATD PAEASLGFAAMAVVLNGTAEAPKALDSFIGQKGAPARRRQYLKLAGEQLVADHQQLSLNRPLNQLALQCGLTGVLAHWQP LSNSTDEQESGLLIPELSAALNSTNLLAGVQTMDPDTLARWDQINPGIADAIKHSEEKGWAPIQAWLSTVSFTRPLPDTS KSRSS
Sequences:
>Translated_325_residues MLMRFLLMALLTSLLLACDSSIDEHADTTPGPTSATDLVEIPAAQWQQRADERFTTAATEWQQALAQFERIPDQQHLAAL RQALSHWYQRFTSQYLLLASRACQQDGRARHQVNLTQLDSWPLYPGYLDVLPQWPESGLISDPSLELTRQSLRRQHGATD PAEASLGFAAMAVVLNGTAEAPKALDSFIGQKGAPARRRQYLKLAGEQLVADHQQLSLNRPLNQLALQCGLTGVLAHWQP LSNSTDEQESGLLIPELSAALNSTNLLAGVQTMDPDTLARWDQINPGIADAIKHSEEKGWAPIQAWLSTVSFTRPLPDTS KSRSS >Mature_325_residues MLMRFLLMALLTSLLLACDSSIDEHADTTPGPTSATDLVEIPAAQWQQRADERFTTAATEWQQALAQFERIPDQQHLAAL RQALSHWYQRFTSQYLLLASRACQQDGRARHQVNLTQLDSWPLYPGYLDVLPQWPESGLISDPSLELTRQSLRRQHGATD PAEASLGFAAMAVVLNGTAEAPKALDSFIGQKGAPARRRQYLKLAGEQLVADHQQLSLNRPLNQLALQCGLTGVLAHWQP LSNSTDEQESGLLIPELSAALNSTNLLAGVQTMDPDTLARWDQINPGIADAIKHSEEKGWAPIQAWLSTVSFTRPLPDTS KSRSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35848; Mature: 35848
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMRFLLMALLTSLLLACDSSIDEHADTTPGPTSATDLVEIPAAQWQQRADERFTTAATE CHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH WQQALAQFERIPDQQHLAALRQALSHWYQRFTSQYLLLASRACQQDGRARHQVNLTQLDS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCC WPLYPGYLDVLPQWPESGLISDPSLELTRQSLRRQHGATDPAEASLGFAAMAVVLNGTAE CCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC APKALDSFIGQKGAPARRRQYLKLAGEQLVADHQQLSLNRPLNQLALQCGLTGVLAHWQP HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC LSNSTDEQESGLLIPELSAALNSTNLLAGVQTMDPDTLARWDQINPGIADAIKHSEEKGW CCCCCCHHHCCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCC APIQAWLSTVSFTRPLPDTSKSRSS HHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLMRFLLMALLTSLLLACDSSIDEHADTTPGPTSATDLVEIPAAQWQQRADERFTTAATE CHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH WQQALAQFERIPDQQHLAALRQALSHWYQRFTSQYLLLASRACQQDGRARHQVNLTQLDS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCC WPLYPGYLDVLPQWPESGLISDPSLELTRQSLRRQHGATDPAEASLGFAAMAVVLNGTAE CCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC APKALDSFIGQKGAPARRRQYLKLAGEQLVADHQQLSLNRPLNQLALQCGLTGVLAHWQP HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC LSNSTDEQESGLLIPELSAALNSTNLLAGVQTMDPDTLARWDQINPGIADAIKHSEEKGW CCCCCCHHHCCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCC APIQAWLSTVSFTRPLPDTSKSRSS HHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA