Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835208

Identifier: 110835208

GI number: 110835208

Start: 2670568

End: 2671341

Strand: Direct

Name: 110835208

Synonym: ABO_2347

Alternate gene names: NA

Gene position: 2670568-2671341 (Clockwise)

Preceding gene: 110835203

Following gene: 110835211

Centisome position: 85.59

GC content: 59.82

Gene sequence:

>774_bases
ATGTGCATTGTACTGTTTGACTGGCAACCAGGCTCTGCCACGCCCCTTAGAGTGGCGGCGAATCGGGATGAGTTTCACGC
GCGACCCGCAGAACCGGCCCGCTGGCGTGACGGTATTTTTTGTGGCCTAGACCTAACTGCCGGGGGCACGTGGCTGGGGA
TTCACCGTAACGGCCGCTTCGCGGGGGTTACCAACTATCGCGAACCCATCACCGACCGCCAACCCGGCGAACGGTCCCGC
GGGCTATTACCCTTCGCGTTCCTAAAAGGGGAACAGACGCCAGAACAGTTCAGCCATCACCTCGCCAAGGAACAACATCA
CTACGGTGCCTTCAATCTTTTGGTGGGCACAGTTAACGCGGACCCTGAACAGGATAGCCTCTGGTATTTAGGCAACCGAG
GCGCAACACCAAGGGCGGTCCGCCCCGGCATTCATGGCCTCAGCAACGGCCTGCTGGACGACCCCTGGCCCAAAGTAGAG
CGAGCCAAACAGAATCTGGCCGCCGCCGTTACTGCCGGTGGGAACCTACAACAGCTCCTGCAGGTGGTTGACGACCGCTA
TCAACCCAACGACAGCGAGCTGCCAGACACCGGTGTCGGCATCGACCTTGAAAGGCTGATCGCCCCCATTTTTATCCAGT
CAGAAACCTACGGCACCCGCGCCAGTAGCGCCGTGATTTTGGACCGAAAACAAGGGCCGCAAATGCTGGAACAGCGGTGG
CAACCGGACGGTAACGCGGCCGGCAATCCAAGCCAGAGTTTCACCAAGCGATAG

Upstream 100 bases:

>100_bases
CTCATTGACGGACACTGAAAGCCCCTGGGCCTCAGCGCTGGAGCGGTTTTATAGCGGCGAGGATAACGGCAGGTGAGCGA
AACAAAGAAAGGAAAAATCA

Downstream 100 bases:

>100_bases
CACGCTCTCAAGACGCTCCTTGCACGATCAACCTTTGCGGATGGTTCGTAATCAACCCATTCGAGGCACAACGCGATGTT
AAAGGAGCGTGCCCATCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MCIVLFDWQPGSATPLRVAANRDEFHARPAEPARWRDGIFCGLDLTAGGTWLGIHRNGRFAGVTNYREPITDRQPGERSR
GLLPFAFLKGEQTPEQFSHHLAKEQHHYGAFNLLVGTVNADPEQDSLWYLGNRGATPRAVRPGIHGLSNGLLDDPWPKVE
RAKQNLAAAVTAGGNLQQLLQVVDDRYQPNDSELPDTGVGIDLERLIAPIFIQSETYGTRASSAVILDRKQGPQMLEQRW
QPDGNAAGNPSQSFTKR

Sequences:

>Translated_257_residues
MCIVLFDWQPGSATPLRVAANRDEFHARPAEPARWRDGIFCGLDLTAGGTWLGIHRNGRFAGVTNYREPITDRQPGERSR
GLLPFAFLKGEQTPEQFSHHLAKEQHHYGAFNLLVGTVNADPEQDSLWYLGNRGATPRAVRPGIHGLSNGLLDDPWPKVE
RAKQNLAAAVTAGGNLQQLLQVVDDRYQPNDSELPDTGVGIDLERLIAPIFIQSETYGTRASSAVILDRKQGPQMLEQRW
QPDGNAAGNPSQSFTKR
>Mature_257_residues
MCIVLFDWQPGSATPLRVAANRDEFHARPAEPARWRDGIFCGLDLTAGGTWLGIHRNGRFAGVTNYREPITDRQPGERSR
GLLPFAFLKGEQTPEQFSHHLAKEQHHYGAFNLLVGTVNADPEQDSLWYLGNRGATPRAVRPGIHGLSNGLLDDPWPKVE
RAKQNLAAAVTAGGNLQQLLQVVDDRYQPNDSELPDTGVGIDLERLIAPIFIQSETYGTRASSAVILDRKQGPQMLEQRW
QPDGNAAGNPSQSFTKR

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190570176, Length=248, Percent_Identity=33.4677419354839, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17566294, Length=260, Percent_Identity=22.6923076923077, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI18859691, Length=264, Percent_Identity=26.8939393939394, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28425; Mature: 28425

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIVLFDWQPGSATPLRVAANRDEFHARPAEPARWRDGIFCGLDLTAGGTWLGIHRNGRF
CEEEEEECCCCCCCCEEEECCCHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCE
AGVTNYREPITDRQPGERSRGLLPFAFLKGEQTPEQFSHHLAKEQHHYGAFNLLVGTVNA
EECCCCCCCCCCCCCCCHHCCCCEEHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC
DPEQDSLWYLGNRGATPRAVRPGIHGLSNGLLDDPWPKVERAKQNLAAAVTAGGNLQQLL
CCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHH
QVVDDRYQPNDSELPDTGVGIDLERLIAPIFIQSETYGTRASSAVILDRKQGPQMLEQRW
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCEEEEECCCCHHHHHHHC
QPDGNAAGNPSQSFTKR
CCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MCIVLFDWQPGSATPLRVAANRDEFHARPAEPARWRDGIFCGLDLTAGGTWLGIHRNGRF
CEEEEEECCCCCCCCEEEECCCHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCE
AGVTNYREPITDRQPGERSRGLLPFAFLKGEQTPEQFSHHLAKEQHHYGAFNLLVGTVNA
EECCCCCCCCCCCCCCCHHCCCCEEHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCC
DPEQDSLWYLGNRGATPRAVRPGIHGLSNGLLDDPWPKVERAKQNLAAAVTAGGNLQQLL
CCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHH
QVVDDRYQPNDSELPDTGVGIDLERLIAPIFIQSETYGTRASSAVILDRKQGPQMLEQRW
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCEEEEECCCCHHHHHHHC
QPDGNAAGNPSQSFTKR
CCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA