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The map label for this gene is yibP [H]

Identifier: 110835136

GI number: 110835136

Start: 2594356

End: 2595531

Strand: Direct

Name: yibP [H]

Synonym: ABO_2275

Alternate gene names: 110835136

Gene position: 2594356-2595531 (Clockwise)

Preceding gene: 110835132

Following gene: 110835137

Centisome position: 83.15

GC content: 58.33

Gene sequence:

>1176_bases
ATGACCCGACAATTACTGCTGCGTTTACTGCTAGCCACCCTGCCCTCCCTGCTGCTTCCTGTTAGCGGAGCGGCAGACAG
TGCGCCCAGCAAAGCGGAGCTGAAAGAACTAAAATCGCGCATCAGTGAATTGAGTGACGCTCAGAGCCGCGAGCTGCGCG
AACGTGACTCCGTGCAGGCCAACCTGCGCAAGACAGAACTGCGCATCAGCCGACTAACCCGAGAGCAGAGAGCGCTAGAG
AAAAAGGCCAGCAAGGCACAGCAACGCCTTAACGCTCTGGAAGCTGAGCAGGCAACCCTGGCCGCAGAAAAACGCACCCA
ACTAGACTGGCTGGGCAAAACCGTACGTGCCAGTTACCAGGCCGGCCGCCAGGAGCGCATCAAATTGCTGCTCAATCAGG
AAAAACCAGACCAGATCGCCCGCCTGTTGCGCTATCAAGAATACTACCAACGCGCCCGCAGTGACCGACTCAAAGCCGTA
AACGGCGAACTGGACGAACTCAAGGCTATTGCCCTGCGCGTGGACAAAGCCCGACAAACGCTACTGAATCAACACACCGA
TCTGCAACGTCATGCCCGTAAACTTCAAGGCGCCCAAAAAGAGCGCCAAACGACCCTCGCTGCCTTGAACCGCTCGTTGG
AAGATCGCGGAAACAACCTCAACCAGCTGAAGGCCGACCAGCAGCAGCTGCAAAAGCTACTGCAAGACATGCAGCGCAGC
CTCAATGGCATTCCTGCAGACCTAGGTGGCACGCCGTTCAACAAACTGGCAGGCAAACTCCCTTGGCCACTACAAGCACG
TATCTCCACCGGTTATAACAGCCGGCGGGAAGGGTCCCTGCGTTGGCAAGGGGTGATACTGAATGCCTCGCCCGGCACCC
CGGTCAGGGCAGTGCATTCTGGCCGCGTCGTGTTTGCTGATTGGCTGCGCGGCTACGGCCTGCTCACGATCGTCGATCAT
GGCAGCGGCTACCTAACACTCTATGGGTATAACCAGAGCCTGCTCCGCGATGTGGGAGAATGGGTTTCTGCAGGGGATAG
CCTTGCTCTGGCGGGTAGTTCTGGCGGCAACCGAACTAGCGGGCTGTACTTCGAGATACGCCACCGCGGCAAGGCCGTGG
ACCCCACACGCTGGTGCAATCAGCGTGTTACACTGCCGCCATTGGCGCAAAATTGA

Upstream 100 bases:

>100_bases
GCCAACTCTGCGGCGCCACTGCTTCCCTCCGGTAAGAAAGCCGAAGGAAAATCGGCGCCAAGTATACACATCCCCGGGCC
GTTAAGGTAAAACCCCCGCC

Downstream 100 bases:

>100_bases
TGATGATTATTGAAATGTGCGCACTTTACCTGCGCGCACTGGGGATCCTGAATGCCAACAACAATCCTGCCGACGCTACG
CTCTATTTTAATCTCGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTRQLLLRLLLATLPSLLLPVSGAADSAPSKAELKELKSRISELSDAQSRELRERDSVQANLRKTELRISRLTREQRALE
KKASKAQQRLNALEAEQATLAAEKRTQLDWLGKTVRASYQAGRQERIKLLLNQEKPDQIARLLRYQEYYQRARSDRLKAV
NGELDELKAIALRVDKARQTLLNQHTDLQRHARKLQGAQKERQTTLAALNRSLEDRGNNLNQLKADQQQLQKLLQDMQRS
LNGIPADLGGTPFNKLAGKLPWPLQARISTGYNSRREGSLRWQGVILNASPGTPVRAVHSGRVVFADWLRGYGLLTIVDH
GSGYLTLYGYNQSLLRDVGEWVSAGDSLALAGSSGGNRTSGLYFEIRHRGKAVDPTRWCNQRVTLPPLAQN

Sequences:

>Translated_391_residues
MTRQLLLRLLLATLPSLLLPVSGAADSAPSKAELKELKSRISELSDAQSRELRERDSVQANLRKTELRISRLTREQRALE
KKASKAQQRLNALEAEQATLAAEKRTQLDWLGKTVRASYQAGRQERIKLLLNQEKPDQIARLLRYQEYYQRARSDRLKAV
NGELDELKAIALRVDKARQTLLNQHTDLQRHARKLQGAQKERQTTLAALNRSLEDRGNNLNQLKADQQQLQKLLQDMQRS
LNGIPADLGGTPFNKLAGKLPWPLQARISTGYNSRREGSLRWQGVILNASPGTPVRAVHSGRVVFADWLRGYGLLTIVDH
GSGYLTLYGYNQSLLRDVGEWVSAGDSLALAGSSGGNRTSGLYFEIRHRGKAVDPTRWCNQRVTLPPLAQN
>Mature_390_residues
TRQLLLRLLLATLPSLLLPVSGAADSAPSKAELKELKSRISELSDAQSRELRERDSVQANLRKTELRISRLTREQRALEK
KASKAQQRLNALEAEQATLAAEKRTQLDWLGKTVRASYQAGRQERIKLLLNQEKPDQIARLLRYQEYYQRARSDRLKAVN
GELDELKAIALRVDKARQTLLNQHTDLQRHARKLQGAQKERQTTLAALNRSLEDRGNNLNQLKADQQQLQKLLQDMQRSL
NGIPADLGGTPFNKLAGKLPWPLQARISTGYNSRREGSLRWQGVILNASPGTPVRAVHSGRVVFADWLRGYGLLTIVDHG
SGYLTLYGYNQSLLRDVGEWVSAGDSLALAGSSGGNRTSGLYFEIRHRGKAVDPTRWCNQRVTLPPLAQN

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=399, Percent_Identity=31.8295739348371, Blast_Score=168, Evalue=6e-43,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=36.8852459016393, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082174, Length=127, Percent_Identity=34.6456692913386, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87081989, Length=142, Percent_Identity=31.6901408450704, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 43930; Mature: 43798

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQLLLRLLLATLPSLLLPVSGAADSAPSKAELKELKSRISELSDAQSRELRERDSVQA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLRKTELRISRLTREQRALEKKASKAQQRLNALEAEQATLAAEKRTQLDWLGKTVRASYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRQERIKLLLNQEKPDQIARLLRYQEYYQRARSDRLKAVNGELDELKAIALRVDKARQT
HCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLNQHTDLQRHARKLQGAQKERQTTLAALNRSLEDRGNNLNQLKADQQQLQKLLQDMQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNGIPADLGGTPFNKLAGKLPWPLQARISTGYNSRREGSLRWQGVILNASPGTPVRAVHS
HCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEECCC
GRVVFADWLRGYGLLTIVDHGSGYLTLYGYNQSLLRDVGEWVSAGDSLALAGSSGGNRTS
CCEEHHHHHHCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCCC
GLYFEIRHRGKAVDPTRWCNQRVTLPPLAQN
CEEEEEECCCCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TRQLLLRLLLATLPSLLLPVSGAADSAPSKAELKELKSRISELSDAQSRELRERDSVQA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLRKTELRISRLTREQRALEKKASKAQQRLNALEAEQATLAAEKRTQLDWLGKTVRASYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRQERIKLLLNQEKPDQIARLLRYQEYYQRARSDRLKAVNGELDELKAIALRVDKARQT
HCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLNQHTDLQRHARKLQGAQKERQTTLAALNRSLEDRGNNLNQLKADQQQLQKLLQDMQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LNGIPADLGGTPFNKLAGKLPWPLQARISTGYNSRREGSLRWQGVILNASPGTPVRAVHS
HCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCEEECCC
GRVVFADWLRGYGLLTIVDHGSGYLTLYGYNQSLLRDVGEWVSAGDSLALAGSSGGNRTS
CCEEHHHHHHCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCCC
GLYFEIRHRGKAVDPTRWCNQRVTLPPLAQN
CEEEEEECCCCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]