| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835055
Identifier: 110835055
GI number: 110835055
Start: 2504198
End: 2504440
Strand: Direct
Name: 110835055
Synonym: ABO_2194
Alternate gene names: NA
Gene position: 2504198-2504440 (Clockwise)
Preceding gene: 110835045
Following gene: 110835070
Centisome position: 80.26
GC content: 60.91
Gene sequence:
>243_bases ATGACTCTCCTTCGCCCCGTGATCGCTGCTCTTTTCCTCGCCTGCGGCCTGGCCTTGGCTCCCGTGGCTACCTACGCCGA ACCGGGCAATACGGTGCAGGCCACCGAATCTGTCCATCCCGCTATTGAGCAGGCCAATACCCACCGGGCAAAAGAAGCCC GTCGTAAACGCTACCTGCTGTTTTTCCCGATCGCCGCGGTTGGCGTCACCGTGGCCCTGATTGTGATTACCCGCCGCAAG TAA
Upstream 100 bases:
>100_bases TCTCCTCGGCACCAATTAAGAAAGAGGGCTCCCAAGCGGGGGCCCTTTTTCGTTTCAGCCCCGGCCTAGCCCCTCTCAAT CACTGATAGCGCAAGTCAAT
Downstream 100 bases:
>100_bases ACCTGCGACGGGAAATCTCCATTCGCTCTCGACAGATCTGCGAAGCAGGCACGCTGCGCGGTCTCAGCGATAGGTCACCG GTTCGGTTATGGCTGTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MTLLRPVIAALFLACGLALAPVATYAEPGNTVQATESVHPAIEQANTHRAKEARRKRYLLFFPIAAVGVTVALIVITRRK
Sequences:
>Translated_80_residues MTLLRPVIAALFLACGLALAPVATYAEPGNTVQATESVHPAIEQANTHRAKEARRKRYLLFFPIAAVGVTVALIVITRRK >Mature_79_residues TLLRPVIAALFLACGLALAPVATYAEPGNTVQATESVHPAIEQANTHRAKEARRKRYLLFFPIAAVGVTVALIVITRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8668; Mature: 8537
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLRPVIAALFLACGLALAPVATYAEPGNTVQATESVHPAIEQANTHRAKEARRKRYLL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHE FFPIAAVGVTVALIVITRRK EECHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLLRPVIAALFLACGLALAPVATYAEPGNTVQATESVHPAIEQANTHRAKEARRKRYLL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHE FFPIAAVGVTVALIVITRRK EECHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA