| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835021
Identifier: 110835021
GI number: 110835021
Start: 2470065
End: 2470286
Strand: Direct
Name: 110835021
Synonym: ABO_2160
Alternate gene names: NA
Gene position: 2470065-2470286 (Clockwise)
Preceding gene: 110835015
Following gene: 110835022
Centisome position: 79.17
GC content: 54.05
Gene sequence:
>222_bases ATGACTTTAGTCGAAGCCATACCCCCTGCTGGCCGACGCAAGCGAATGCCACAAATGCCTAGCCTTACACTGAAAATACA GGCCTGCTCAGCAGTGGGTTTTACCCGAATAGATCAGGCACTGGCATGCATGGCATCACAGGGCGCCCACCTAGTGCTGC AGTGGCCTTTCGACCACGCCTTGAATGTGGCCGTGGTGACAGGTAATGGAGCCATTTCATAA
Upstream 100 bases:
>100_bases GTCCCTCTGCGTCATCAGGAAATCAGGCCACCACCCTTCAGCTGGCAAACAAGGGATAGGCTCAACACCAAGACTAACCA AAGGACGCTAGCGACACAGT
Downstream 100 bases:
>100_bases CCGGAAATTTTTCCTATACGGCACGGATAAACGCATGGGAAGAACAGAAAAGCTACGGTGTGCTGATAACCACACCCAAC GGATCGGGGCTAATTCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MTLVEAIPPAGRRKRMPQMPSLTLKIQACSAVGFTRIDQALACMASQGAHLVLQWPFDHALNVAVVTGNGAIS
Sequences:
>Translated_73_residues MTLVEAIPPAGRRKRMPQMPSLTLKIQACSAVGFTRIDQALACMASQGAHLVLQWPFDHALNVAVVTGNGAIS >Mature_72_residues TLVEAIPPAGRRKRMPQMPSLTLKIQACSAVGFTRIDQALACMASQGAHLVLQWPFDHALNVAVVTGNGAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7758; Mature: 7627
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVEAIPPAGRRKRMPQMPSLTLKIQACSAVGFTRIDQALACMASQGAHLVLQWPFDHA CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC LNVAVVTGNGAIS EEEEEEECCCCCC >Mature Secondary Structure TLVEAIPPAGRRKRMPQMPSLTLKIQACSAVGFTRIDQALACMASQGAHLVLQWPFDHA CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC LNVAVVTGNGAIS EEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA