| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834991
Identifier: 110834991
GI number: 110834991
Start: 2431561
End: 2432562
Strand: Direct
Name: 110834991
Synonym: ABO_2130
Alternate gene names: NA
Gene position: 2431561-2432562 (Clockwise)
Preceding gene: 110834990
Following gene: 110834994
Centisome position: 77.93
GC content: 60.08
Gene sequence:
>1002_bases ATGGTGATGCTTCCTAAGCCACTACGTACCCCTCTGCTGCATACCCTGGGCTGCGAACTGCCTATCATGCTGGCAGGCAT GGGCGGCGTGTCTCGCCATCAATTGGCGGCGGCGGTAAACCAGGCGGGTGGCTTCGGCGTACTGGGCATGGTCCGTGAAC CCGTGGAACGCATTCGCCAGGAAGTGGAAGCACTACGTGCCATCAACGATGGCCCGTTTGCGGTTAACCTGATTCCCGCC GCCACAGAACGGCGTCTGCTGATGGACCAAGTTGCCACTTGCCTGGCGCTACAGGTAGACGCTTTTGTGTTCTTTTGGGA TGTGGATACCGGCCTGGTGCAATACCTGAAACAAGAAGGCAAGCAGGTGATCTATCAGGTGGGCAACCAGCGCGATGCAG ACCTGGCACAATCCGCAGGCGCCGATGTCTTGATCGTGCAAGGGCACGAAGCCGGCGGCCATGTTCGTGGCACCACGGCC ACCTTGTCACTGCTCCCCCAGGTCGTCGCCAATAGCGACGTACCGGTGGTGGCTTCCGGCGGCATTGCCAGCGGCGGCGC CATGCTGGCGGCGTTCTCCATGGGCGCGCAGGGCGTCAGCCTGGGCAGCGCTTTCCTTGCCACCCATGAAGCCAATGCGC ACTCGCACCACAAACAACGCATCGTTGATGCCCGCGCCGACGATACCGTTTACACCACGCGCTTTTCTCGTAACTGGCAT GAACCCGCGCCGGTCCGCGTGCTCAGCAACGCCGTCACTCGAGGCGATTACGATGAAGCCGACCCGGATACCTGTATCGG CGAACAGGACGGGCAACCGATTTATCTATTTTCCACCGATTCACCGTTAACGGGCGCCCAGGGGAAACTCGACGACATGG CACTGTTCTGCGGCCAATCGTGCAGTCAGATCAACGCGATCACCAGTGTGCAGCAGCGCATCGATACACTGCTCGACGAG GTACATATTCGCATTGCCGCGTTATACAGGGATTCACGCTGA
Upstream 100 bases:
>100_bases AAGAGCGAGGCCTGGATCGCCAAACCCTGCTCGACGGTGTACAGGCAGTCAGTCGCCAAGGCTTGGTCAACCTATATGAA AGCGTGGATCAGATCTGGCA
Downstream 100 bases:
>100_bases CCGGAGGTCTTCCATGTCACCACCGACTAGGCAAGAAACACCACAACGCGAACGTATTCGTCCGCTACCCAGCCTTGTTC TCCTTCTCTTGGTTACCGCA
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MVMLPKPLRTPLLHTLGCELPIMLAGMGGVSRHQLAAAVNQAGGFGVLGMVREPVERIRQEVEALRAINDGPFAVNLIPA ATERRLLMDQVATCLALQVDAFVFFWDVDTGLVQYLKQEGKQVIYQVGNQRDADLAQSAGADVLIVQGHEAGGHVRGTTA TLSLLPQVVANSDVPVVASGGIASGGAMLAAFSMGAQGVSLGSAFLATHEANAHSHHKQRIVDARADDTVYTTRFSRNWH EPAPVRVLSNAVTRGDYDEADPDTCIGEQDGQPIYLFSTDSPLTGAQGKLDDMALFCGQSCSQINAITSVQQRIDTLLDE VHIRIAALYRDSR
Sequences:
>Translated_333_residues MVMLPKPLRTPLLHTLGCELPIMLAGMGGVSRHQLAAAVNQAGGFGVLGMVREPVERIRQEVEALRAINDGPFAVNLIPA ATERRLLMDQVATCLALQVDAFVFFWDVDTGLVQYLKQEGKQVIYQVGNQRDADLAQSAGADVLIVQGHEAGGHVRGTTA TLSLLPQVVANSDVPVVASGGIASGGAMLAAFSMGAQGVSLGSAFLATHEANAHSHHKQRIVDARADDTVYTTRFSRNWH EPAPVRVLSNAVTRGDYDEADPDTCIGEQDGQPIYLFSTDSPLTGAQGKLDDMALFCGQSCSQINAITSVQQRIDTLLDE VHIRIAALYRDSR >Mature_333_residues MVMLPKPLRTPLLHTLGCELPIMLAGMGGVSRHQLAAAVNQAGGFGVLGMVREPVERIRQEVEALRAINDGPFAVNLIPA ATERRLLMDQVATCLALQVDAFVFFWDVDTGLVQYLKQEGKQVIYQVGNQRDADLAQSAGADVLIVQGHEAGGHVRGTTA TLSLLPQVVANSDVPVVASGGIASGGAMLAAFSMGAQGVSLGSAFLATHEANAHSHHKQRIVDARADDTVYTTRFSRNWH EPAPVRVLSNAVTRGDYDEADPDTCIGEQDGQPIYLFSTDSPLTGAQGKLDDMALFCGQSCSQINAITSVQQRIDTLLDE VHIRIAALYRDSR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 35652; Mature: 35652
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMLPKPLRTPLLHTLGCELPIMLAGMGGVSRHQLAAAVNQAGGFGVLGMVREPVERIRQ CCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EVEALRAINDGPFAVNLIPAATERRLLMDQVATCLALQVDAFVFFWDVDTGLVQYLKQEG HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHH KQVIYQVGNQRDADLAQSAGADVLIVQGHEAGGHVRGTTATLSLLPQVVANSDVPVVASG HHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCEECCHHHHHHHHHHHHCCCCCCEEECC GIASGGAMLAAFSMGAQGVSLGSAFLATHEANAHSHHKQRIVDARADDTVYTTRFSRNWH CCCCCCHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCC EPAPVRVLSNAVTRGDYDEADPDTCIGEQDGQPIYLFSTDSPLTGAQGKLDDMALFCGQS CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCC CSQINAITSVQQRIDTLLDEVHIRIAALYRDSR HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure MVMLPKPLRTPLLHTLGCELPIMLAGMGGVSRHQLAAAVNQAGGFGVLGMVREPVERIRQ CCCCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EVEALRAINDGPFAVNLIPAATERRLLMDQVATCLALQVDAFVFFWDVDTGLVQYLKQEG HHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHH KQVIYQVGNQRDADLAQSAGADVLIVQGHEAGGHVRGTTATLSLLPQVVANSDVPVVASG HHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCEECCHHHHHHHHHHHHCCCCCCEEECC GIASGGAMLAAFSMGAQGVSLGSAFLATHEANAHSHHKQRIVDARADDTVYTTRFSRNWH CCCCCCHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCC EPAPVRVLSNAVTRGDYDEADPDTCIGEQDGQPIYLFSTDSPLTGAQGKLDDMALFCGQS CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCC CSQINAITSVQQRIDTLLDEVHIRIAALYRDSR HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA