| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834976
Identifier: 110834976
GI number: 110834976
Start: 2420462
End: 2421370
Strand: Direct
Name: 110834976
Synonym: ABO_2115
Alternate gene names: NA
Gene position: 2420462-2421370 (Clockwise)
Preceding gene: 110834973
Following gene: 110834978
Centisome position: 77.58
GC content: 52.7
Gene sequence:
>909_bases ATGGCCACTCTTTTTGTCGAAAATTTAACTGTCGCCGATTTCTCTTACCTCCATTCCAAGCGCGGTATGGTGGGTGAATC ATGGCTTGTTGACCTAGAACTCAGCGGCGAGCTAGATGATCAGGGCATGGTCTTCGATTTTGGCCACATCAAGAAGCAAA TCAAACAGCTCATTGATGACAATGTCGATCACCGCCTACTGGTTCCGGTCGACAGTGACCAGGTCACTATTACTGAGCGC GATAAAGACATCAGCCTTGAGTGGATATATCGTGGCGGCACCATCCGTATGATCGCCCCCAACCAAAGCCTACTTTTAAT GGCCGGCCCGGAAGTCACCAAGGCCAGCCTGACCCTGTATCTGATGGACCTGATCCAAACCGTAGTGCCCAAAAATGTGG AGGAAGTGCGCGTAGTTCTGCGCGAAGAAGATACTGGAACCGCGCCGTTTTACCACTATTCACACGGTCTAAAAAAACAT GATGGCAACTGCCAGCGCATTGCTCACGGCCACCGTTCCAATATCCACATTTTCGAGAATGGCCGCCGCAGCCGTTACTG GGAAAAGCTGTGGGCGGATCGCTGGGAAGATATTTATCTAGGCACCGAAGAGGACCTGGAAGGCACTTACTATATCGACG AAATCCCCCATCACCGATTCCGCTACGATGCACAGCAGGGGTATTTTGAACTGGTGATCCCGGAAGATCACTGCTACATG ATCGATACAGACACCACCGTAGAGCAGCTGGCGACCCACATTGCCAATCAACTGGCCACCGAAGCCCCGGGCAAACACTT TCGTGTCCGGGCCTTCGAAGGCGTAGGTAAAGGAGCCATTGCCGACGCCGGCGAAAACATGCCGGGCAAGACCCACAATA GCTGGCTCAGCAGCACGCCGGTAATCTAA
Upstream 100 bases:
>100_bases TCGTAAAATGTTCGCTGTGGACCACAGTGCACCTTAGCGGCAGCCCAGAATAATGGCATTATAGTGGCCTGTCTAAACCC ACCATCATCACCGGAATAGC
Downstream 100 bases:
>100_bases TAGCAAGGGAACGACCCTATCCCTACCGATGGAGCGCCAAGCCGAAGTGCACAGCTCGCACCTCGGCCATGGCGCACGAA CAAAACGCTACAAGGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: 6-Pyruvoyl-Tetrahydropterin Synthase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MATLFVENLTVADFSYLHSKRGMVGESWLVDLELSGELDDQGMVFDFGHIKKQIKQLIDDNVDHRLLVPVDSDQVTITER DKDISLEWIYRGGTIRMIAPNQSLLLMAGPEVTKASLTLYLMDLIQTVVPKNVEEVRVVLREEDTGTAPFYHYSHGLKKH DGNCQRIAHGHRSNIHIFENGRRSRYWEKLWADRWEDIYLGTEEDLEGTYYIDEIPHHRFRYDAQQGYFELVIPEDHCYM IDTDTTVEQLATHIANQLATEAPGKHFRVRAFEGVGKGAIADAGENMPGKTHNSWLSSTPVI
Sequences:
>Translated_302_residues MATLFVENLTVADFSYLHSKRGMVGESWLVDLELSGELDDQGMVFDFGHIKKQIKQLIDDNVDHRLLVPVDSDQVTITER DKDISLEWIYRGGTIRMIAPNQSLLLMAGPEVTKASLTLYLMDLIQTVVPKNVEEVRVVLREEDTGTAPFYHYSHGLKKH DGNCQRIAHGHRSNIHIFENGRRSRYWEKLWADRWEDIYLGTEEDLEGTYYIDEIPHHRFRYDAQQGYFELVIPEDHCYM IDTDTTVEQLATHIANQLATEAPGKHFRVRAFEGVGKGAIADAGENMPGKTHNSWLSSTPVI >Mature_301_residues ATLFVENLTVADFSYLHSKRGMVGESWLVDLELSGELDDQGMVFDFGHIKKQIKQLIDDNVDHRLLVPVDSDQVTITERD KDISLEWIYRGGTIRMIAPNQSLLLMAGPEVTKASLTLYLMDLIQTVVPKNVEEVRVVLREEDTGTAPFYHYSHGLKKHD GNCQRIAHGHRSNIHIFENGRRSRYWEKLWADRWEDIYLGTEEDLEGTYYIDEIPHHRFRYDAQQGYFELVIPEDHCYMI DTDTTVEQLATHIANQLATEAPGKHFRVRAFEGVGKGAIADAGENMPGKTHNSWLSSTPVI
Specific function: Unknown
COG id: COG0720
COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34586; Mature: 34455
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLFVENLTVADFSYLHSKRGMVGESWLVDLELSGELDDQGMVFDFGHIKKQIKQLIDD CCEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCC NVDHRLLVPVDSDQVTITERDKDISLEWIYRGGTIRMIAPNQSLLLMAGPEVTKASLTLY CCCCEEEEEECCCEEEEEECCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCHHHHHHH LMDLIQTVVPKNVEEVRVVLREEDTGTAPFYHYSHGLKKHDGNCQRIAHGHRSNIHIFEN HHHHHHHHCCCCHHHHEEEEEECCCCCCCEEHHCCCCCCCCCCHHHHHCCCCCCEEEEEC GRRSRYWEKLWADRWEDIYLGTEEDLEGTYYIDEIPHHRFRYDAQQGYFELVIPEDHCYM CCHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCEEECCCCCEEEEEECCCCEEE IDTDTTVEQLATHIANQLATEAPGKHFRVRAFEGVGKGAIADAGENMPGKTHNSWLSSTP EECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC VI CC >Mature Secondary Structure ATLFVENLTVADFSYLHSKRGMVGESWLVDLELSGELDDQGMVFDFGHIKKQIKQLIDD CEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCC NVDHRLLVPVDSDQVTITERDKDISLEWIYRGGTIRMIAPNQSLLLMAGPEVTKASLTLY CCCCEEEEEECCCEEEEEECCCCCEEEEEEECCEEEEECCCCCEEEEECCCCCHHHHHHH LMDLIQTVVPKNVEEVRVVLREEDTGTAPFYHYSHGLKKHDGNCQRIAHGHRSNIHIFEN HHHHHHHHCCCCHHHHEEEEEECCCCCCCEEHHCCCCCCCCCCHHHHHCCCCCCEEEEEC GRRSRYWEKLWADRWEDIYLGTEEDLEGTYYIDEIPHHRFRYDAQQGYFELVIPEDHCYM CCHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCEEECCCCCEEEEEECCCCEEE IDTDTTVEQLATHIANQLATEAPGKHFRVRAFEGVGKGAIADAGENMPGKTHNSWLSSTP EECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC VI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA