| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834944
Identifier: 110834944
GI number: 110834944
Start: 2370076
End: 2372349
Strand: Direct
Name: 110834944
Synonym: ABO_2083
Alternate gene names: NA
Gene position: 2370076-2372349 (Clockwise)
Preceding gene: 110834938
Following gene: 110834948
Centisome position: 75.96
GC content: 44.59
Gene sequence:
>2274_bases ATGCTAGCTGAAACACCTTATCCCAATCCCTTCGAGCTTATCCGCTATGTGTTGCGCTGCCTTGACCTAAAGCAGTCCAA CAAGCGCCTTGATGATCTGGCAGGGAAATCAATCTATGACCCTAGAGAGCTAACGAGAGAGCTGGAGCAGAGTGCTCCCT CGACCCTGGAAAAATATATGGGTCCAGTCGCTTCCGATAAAATATCAACAAGCCTCAGCACATTTATTGATCATTATTTG CGCGACATTGTGGGTAAGACTGCCGCTGACGGAGTAAGCAGAGCCGATGTATTGGGCTTATTAATTAGAAGCTGCATCAA GGAGCACCTTGTTGGCTTTGTAACAAAGCTAAATCAAGAGCTTAAAGCCCCTCACCCAAGCTTCTGGTTCTCACCAGGGG CGAATACTGTTGGTGCAACCTTTGCCTGGCTAGAAGAGCATCAACCCGGCATGACTGCTTATCTGGCCTCACTGAGCAAA GAGAACAGAGACAGAATTTCCTCATGGAGAAATGGCAAAGAACTGCCATCAGCTCAGTCTATCCAGTTGCTATTCTCCAC AAGCAACCCATCAAAAACCTGTGAGATAACCAGAAACAGGAATTTCGCCAAGTCATTACTCTTTATGGCAAGGGCCGTCG ATTTCATCAAAAGGCATGACCAGGGTAAAAGATTGATTGATGAGGCTCGTCTTTCAATCTGGAATGCAGAAAATGGGATT CATTTCGGCAACGCAATCGAGAGGATTCAGGCCCGATTATGGCTTACAGTAAAAAATAAGGATCAGCATGTTGGAAAATT ACAACGCGACTTAATGCGAGGAACTGAAAAGTCCGATAGTGAGGGGCACCAAGAAACCATCAGACAAGTCAGAAAAATAA TTCAATATTCAAGCAGCCTTAAATCTGCTCAGTACTGGATAGATTGGTACGATGCTAGGTGGCATGTTTTCTCCGGAGAA TTGGAAGAAGCAAACCGGTTATATAAAGAATCGTTCGAGAAGGCCTCTTTTGTAGCAGGAGAAAACCTTAGAGACATCAT AAGAGAGGCACTTGTCGTAGCCGCCAATCAATCCAAATCCGACATCGTCTTTCTTAAACAACTAAAATGGTCTCTTGTTA ACTTTGGATATGACATCCCCTCGGCATCAGTATCCAAGCCGTCGAACACGGTTTCAGACACTATTGAAAGATGGGAAATT GAGCAGTGGAGAAGCGCATTCTTCAAAGTTTTCCCCAAAGAAGGCCTTTATCCTGGCACTGATTTTGGTTTCAAGGTCGA CTCTACAGGCCCTCTAATTTTTACCGATCCTGGAAATATCAAGCCGGATTACCGGTATCCACGCAGAAAAATCAAGATTG GGGACACATGGAAGCGTTCCATGCCACAGATTGTCTGGTTTGCTATTAATGAAAATATTGAAGCTTGCAGGCAACTCTTA GAGAAAGGTGCTGACATTAACGTTCAATCTGAAGTCGGCGACACCCCTATCCTTATTGCTTTAGAGGCACTTAACTTAAC AGAAGTTCCGTATCGATCTCTTAATGATGAACTTTATCAGCTTATATCAATGGAAAGGCATAATGGAGCAACCATCAACA CGCGAACTGAAAAGAAGCGCTTGCTACCGATAATCTCGGCGGTACAAACAGGTCGATTTGAGATTGTAGAAAAGATTCTC TCCATGGGGGCAAATCCTAATGGACGAGGCAAAACTGATGAGCAAACCTCACTCACGGTTTGTTTGAAGCTCATTGGTAT CCTTAAAAACCCAGAATTAAGCAAGAACGAACAACTTAGTATCCCAATCACACCCGAGACTCTTGACTCAATTCGTCGTT ACTCTCAAGGCGCTTTCGGTTTTACTCTCGAGGACCAGATGAAAAATCTGGAACAGATGGAATCCTCAGCACTTTATCAA CAGATCTGGGAGCGTTATCTCGACTTAATGTACCAACGCATTTGCGAAAATATGAACCTTGCAGAAATGAGGAGGGTAGC GTCTCTTCTGATCAAAGCTGGAGCCGACGCCAACGCCGAGCACAGCAGCCCAATCAAAGGCTATACACCATTGATGCTTG CAGCCGAACTCGACGAAGTTGATCTTTTTGAAATCATGCTTGTCCATGGGGGTGATACGGCAAAGACCTATGTTGACCCG AAATCAGGCAGAGATGTATCCATCAATGAAATTGCAAATTACTTTGATTCACGAGACATCCTGTTGCTGATGAGCCGACT AGCTCCAGCCCTCAATGACAAAGGCAAAATGTAA
Upstream 100 bases:
>100_bases GGTTACCGTGTGGCCATACCCTCAACACCCAGCGACTGCCGTACTTGGCGTAATTTCAACCGGGATATACGACATATCAA TAAGAAACAGGAACAGCTTC
Downstream 100 bases:
>100_bases GTAACCACAAACCATATTGGCCGGATAGATCATAGTCTGGACAAACTATGCCATCAAAATCCGGCCAACTTATGGTTACA CGAACATATTTTTTCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MLAETPYPNPFELIRYVLRCLDLKQSNKRLDDLAGKSIYDPRELTRELEQSAPSTLEKYMGPVASDKISTSLSTFIDHYL RDIVGKTAADGVSRADVLGLLIRSCIKEHLVGFVTKLNQELKAPHPSFWFSPGANTVGATFAWLEEHQPGMTAYLASLSK ENRDRISSWRNGKELPSAQSIQLLFSTSNPSKTCEITRNRNFAKSLLFMARAVDFIKRHDQGKRLIDEARLSIWNAENGI HFGNAIERIQARLWLTVKNKDQHVGKLQRDLMRGTEKSDSEGHQETIRQVRKIIQYSSSLKSAQYWIDWYDARWHVFSGE LEEANRLYKESFEKASFVAGENLRDIIREALVVAANQSKSDIVFLKQLKWSLVNFGYDIPSASVSKPSNTVSDTIERWEI EQWRSAFFKVFPKEGLYPGTDFGFKVDSTGPLIFTDPGNIKPDYRYPRRKIKIGDTWKRSMPQIVWFAINENIEACRQLL EKGADINVQSEVGDTPILIALEALNLTEVPYRSLNDELYQLISMERHNGATINTRTEKKRLLPIISAVQTGRFEIVEKIL SMGANPNGRGKTDEQTSLTVCLKLIGILKNPELSKNEQLSIPITPETLDSIRRYSQGAFGFTLEDQMKNLEQMESSALYQ QIWERYLDLMYQRICENMNLAEMRRVASLLIKAGADANAEHSSPIKGYTPLMLAAELDEVDLFEIMLVHGGDTAKTYVDP KSGRDVSINEIANYFDSRDILLLMSRLAPALNDKGKM
Sequences:
>Translated_757_residues MLAETPYPNPFELIRYVLRCLDLKQSNKRLDDLAGKSIYDPRELTRELEQSAPSTLEKYMGPVASDKISTSLSTFIDHYL RDIVGKTAADGVSRADVLGLLIRSCIKEHLVGFVTKLNQELKAPHPSFWFSPGANTVGATFAWLEEHQPGMTAYLASLSK ENRDRISSWRNGKELPSAQSIQLLFSTSNPSKTCEITRNRNFAKSLLFMARAVDFIKRHDQGKRLIDEARLSIWNAENGI HFGNAIERIQARLWLTVKNKDQHVGKLQRDLMRGTEKSDSEGHQETIRQVRKIIQYSSSLKSAQYWIDWYDARWHVFSGE LEEANRLYKESFEKASFVAGENLRDIIREALVVAANQSKSDIVFLKQLKWSLVNFGYDIPSASVSKPSNTVSDTIERWEI EQWRSAFFKVFPKEGLYPGTDFGFKVDSTGPLIFTDPGNIKPDYRYPRRKIKIGDTWKRSMPQIVWFAINENIEACRQLL EKGADINVQSEVGDTPILIALEALNLTEVPYRSLNDELYQLISMERHNGATINTRTEKKRLLPIISAVQTGRFEIVEKIL SMGANPNGRGKTDEQTSLTVCLKLIGILKNPELSKNEQLSIPITPETLDSIRRYSQGAFGFTLEDQMKNLEQMESSALYQ QIWERYLDLMYQRICENMNLAEMRRVASLLIKAGADANAEHSSPIKGYTPLMLAAELDEVDLFEIMLVHGGDTAKTYVDP KSGRDVSINEIANYFDSRDILLLMSRLAPALNDKGKM >Mature_757_residues MLAETPYPNPFELIRYVLRCLDLKQSNKRLDDLAGKSIYDPRELTRELEQSAPSTLEKYMGPVASDKISTSLSTFIDHYL RDIVGKTAADGVSRADVLGLLIRSCIKEHLVGFVTKLNQELKAPHPSFWFSPGANTVGATFAWLEEHQPGMTAYLASLSK ENRDRISSWRNGKELPSAQSIQLLFSTSNPSKTCEITRNRNFAKSLLFMARAVDFIKRHDQGKRLIDEARLSIWNAENGI HFGNAIERIQARLWLTVKNKDQHVGKLQRDLMRGTEKSDSEGHQETIRQVRKIIQYSSSLKSAQYWIDWYDARWHVFSGE LEEANRLYKESFEKASFVAGENLRDIIREALVVAANQSKSDIVFLKQLKWSLVNFGYDIPSASVSKPSNTVSDTIERWEI EQWRSAFFKVFPKEGLYPGTDFGFKVDSTGPLIFTDPGNIKPDYRYPRRKIKIGDTWKRSMPQIVWFAINENIEACRQLL EKGADINVQSEVGDTPILIALEALNLTEVPYRSLNDELYQLISMERHNGATINTRTEKKRLLPIISAVQTGRFEIVEKIL SMGANPNGRGKTDEQTSLTVCLKLIGILKNPELSKNEQLSIPITPETLDSIRRYSQGAFGFTLEDQMKNLEQMESSALYQ QIWERYLDLMYQRICENMNLAEMRRVASLLIKAGADANAEHSSPIKGYTPLMLAAELDEVDLFEIMLVHGGDTAKTYVDP KSGRDVSINEIANYFDSRDILLLMSRLAPALNDKGKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86061; Mature: 86061
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAETPYPNPFELIRYVLRCLDLKQSNKRLDDLAGKSIYDPRELTRELEQSAPSTLEKYM CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHH GPVASDKISTSLSTFIDHYLRDIVGKTAADGVSRADVLGLLIRSCIKEHLVGFVTKLNQE CCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKAPHPSFWFSPGANTVGATFAWLEEHQPGMTAYLASLSKENRDRISSWRNGKELPSAQS HCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC IQLLFSTSNPSKTCEITRNRNFAKSLLFMARAVDFIKRHDQGKRLIDEARLSIWNAENGI EEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC HFGNAIERIQARLWLTVKNKDQHVGKLQRDLMRGTEKSDSEGHQETIRQVRKIIQYSSSL CHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH KSAQYWIDWYDARWHVFSGELEEANRLYKESFEKASFVAGENLRDIIREALVVAANQSKS HHHHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC DIVFLKQLKWSLVNFGYDIPSASVSKPSNTVSDTIERWEIEQWRSAFFKVFPKEGLYPGT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DFGFKVDSTGPLIFTDPGNIKPDYRYPRRKIKIGDTWKRSMPQIVWFAINENIEACRQLL CCCEEECCCCCEEEECCCCCCCCCCCCCCEEECCCHHHHCCCCEEEEEECCCHHHHHHHH EKGADINVQSEVGDTPILIALEALNLTEVPYRSLNDELYQLISMERHNGATINTRTEKKR HCCCCCEEHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHH LLPIISAVQTGRFEIVEKILSMGANPNGRGKTDEQTSLTVCLKLIGILKNPELSKNEQLS HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE IPITPETLDSIRRYSQGAFGFTLEDQMKNLEQMESSALYQQIWERYLDLMYQRICENMNL ECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AEMRRVASLLIKAGADANAEHSSPIKGYTPLMLAAELDEVDLFEIMLVHGGDTAKTYVDP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCCCCEEEEEEEECCCCCCEEECC KSGRDVSINEIANYFDSRDILLLMSRLAPALNDKGKM CCCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLAETPYPNPFELIRYVLRCLDLKQSNKRLDDLAGKSIYDPRELTRELEQSAPSTLEKYM CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHH GPVASDKISTSLSTFIDHYLRDIVGKTAADGVSRADVLGLLIRSCIKEHLVGFVTKLNQE CCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKAPHPSFWFSPGANTVGATFAWLEEHQPGMTAYLASLSKENRDRISSWRNGKELPSAQS HCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC IQLLFSTSNPSKTCEITRNRNFAKSLLFMARAVDFIKRHDQGKRLIDEARLSIWNAENGI EEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC HFGNAIERIQARLWLTVKNKDQHVGKLQRDLMRGTEKSDSEGHQETIRQVRKIIQYSSSL CHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH KSAQYWIDWYDARWHVFSGELEEANRLYKESFEKASFVAGENLRDIIREALVVAANQSKS HHHHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC DIVFLKQLKWSLVNFGYDIPSASVSKPSNTVSDTIERWEIEQWRSAFFKVFPKEGLYPGT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DFGFKVDSTGPLIFTDPGNIKPDYRYPRRKIKIGDTWKRSMPQIVWFAINENIEACRQLL CCCEEECCCCCEEEECCCCCCCCCCCCCCEEECCCHHHHCCCCEEEEEECCCHHHHHHHH EKGADINVQSEVGDTPILIALEALNLTEVPYRSLNDELYQLISMERHNGATINTRTEKKR HCCCCCEEHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHH LLPIISAVQTGRFEIVEKILSMGANPNGRGKTDEQTSLTVCLKLIGILKNPELSKNEQLS HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE IPITPETLDSIRRYSQGAFGFTLEDQMKNLEQMESSALYQQIWERYLDLMYQRICENMNL ECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AEMRRVASLLIKAGADANAEHSSPIKGYTPLMLAAELDEVDLFEIMLVHGGDTAKTYVDP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCCCCEEEEEEEECCCCCCEEECC KSGRDVSINEIANYFDSRDILLLMSRLAPALNDKGKM CCCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA