Definition Clostridium perfringens SM101 plasmid 1, complete sequence.
Accession NC_008263
Length 12,397

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The map label for this gene is bcn

Identifier: 110804003

GI number:

Start: 4894

End: 8097

Strand: Direct

Name: bcn

Synonym: CPR_A0006

Alternate gene names: NA

Gene position: NA

Preceding gene: 110804000

Following gene: 110804001

Centisome position: NA

GC content: NA

Gene sequence:

>3204_bases
TTGATTTTAAAAATAAAAAGTGAGGTTTTAAAAATGATAATGAGATTTATACCAAGTGTAAATCCAGGAGATTCAGTTGG
AAGTAAGCCAACGTTTCCTGTAAATGCACAAGTAAAAGGAGATTTCTTATATTTAAGAGATGCTAATGGAAATCAAATAG
CAGGAAGAAGTGTAAGTGATGGAGATGAAATAACTGTTTTAAAAGTAGATCATACTAAACAGTTAGCGTTAGTACAATAT
CCTGCAGGAACTATTTATAGACAAGGCTATGTAACTAATGCAACAAGTATTATAAAATACAAAAACGAATATAATTGGTT
AAATGGTTCTACTCCAGAAACTGTATATGATGTAGATAAGAAAACACAAATAGGTAGTTTAGATCCAAGAGAGAAAGCAA
CAATACTTTATAAAGTAGATGGAATGACTGCACTTGTATATGATACAAGTAAAGGTAAAATGACTAAATCAGGTTTAGTT
CACTATGCTGGTTCGGGTGGATCTACTGGTGGCGGAGATATAAATGGTATAGCACCAGGAGGGGAAGTACCAGGAGGATT
CACATATCCTAATAATGCTCAGGTTGTTGGAGATGACTTATATTTAAGAGATGCTAATGGTAATCAAATATCTGGAAGAG
TTGTAAGTAATGGTGATAAGATAACAGTTTTAGATGTAGGATATACTAAGCAATTAGCTTTAGTACAATATCCTGCTGGT
AGTGTTGTTAGGCAAGGATATGTTACAAATGCAACTAACTTGATTCGTTACTTTAAACAAGGAGAATGGTTAAACGGAAG
TACTACAGAGCCTGTATTAGATGAGAATGGTGGTTCATTAGGATCATTAAGTCCATATGAAGCTGCAACACCATTATATA
AGAAAAATGGAATGACACATGTAGTATATGATACTTCTAAAGGTCCAAATACAAAATCAGGTTATGTAAAATTTGAGGGA
TTGCCAGAGTTGCCTGATACAGGTATTCAAATTCCTTCAACTTCACATTCACAAGCAACTGTTGAAGTATATGGAACAAG
TGGAAAAGGAAGACCGTTAAAAGTTTATAAAATAGGAAGTGGTAGTAAAGTACTATTTGCAGGATTCGCGTTACATGGAT
GGGAAGATAACTGGTCAAATGATGGACTTGCATTAGTAAATATAGCAAATTCATTAATAGAAAAGATAGGAGATTATAAA
GCACAAAATGGTCTTCATGGATGGACAGTATATATAGCACCTTGTATGAACCCTGACGGAGTTGTGGTTAAAGGAACTCA
TAATGGGCCAGGTAGATGTGCGGTAACTACTAGAGTTGATATGAATAGATGTTTCCCATATAAATTTTCACCACAATATA
TTTCAAGAAACTATACTGGACCTAATCCATTAGGAGCACCAGAAGCTGTAGCACTTAAAAATTTAGTTGAAAGAATAAAT
GTTAGTTCAAGTGAAATGGTAGTTTTAGATTTCCATGGGTGGATGAATTTCACTCAAGGTAATGCAGAGTTAGGAAGCTA
TTTTGGAAATCAATTTGGGTTTGGGCATAAAAACTTATATAGCTCAGGTTTCTTTTCAAGTTGGGCAACAACTTTAAGGA
ATACAAAAGCAGTTTTAATTGAGTATCCTACAAATACTTATAGCTATAATGATGTTATAAATAAAAATTATATAGGAAAA
ACTTTCAATGGAATAATAAATATTCTTAAGAATAATCCTAATGGTGGAGATGTAGATAATGGTGGATCAGATTCGAGTGA
AATTCCTTATAATGCAAATGGAGAAGTAATTAACGTAGAACCAACATCAGCATTAAATGTAAGAAGTGGTCCAGGAACAA
CATATAGAGCAATAGGAACACTAAAGTTAGGAAATAGAGTAACTATTTTAGCTAAAACTAAACCGGCTGGAGAAACGAAG
GATTGGTATAAAATAAGTTTTAATTATGGAAGTGGATATATAAGAAGTGATTTCGTTAAGCTAGACTCATCTGAGATTAA
TTATAATGCTGTAGGTGAAATAATAAATGTATCATCTTTTTTGAATGTAAGAAGTGGTCCAGGTACAAATTTTGAGATGT
TAGGTAAATTATATAAGGGGGATGTAGTTTTAATAGTATCAAAGAATGGAGACTGGTATAAGATTAGATATGGTACTACA
TTTGGATATATTCATAAAGATTATGTATATATAAATAAGGAAAATGATAATTTTGTTGAAAAAAAGGTTCAGATTGGTGC
AGTTGAAATTAATAAGGTTAAAACTATAGATGGCATAGTTTTCGCTAATATAAATCAGATGTTAAAAGGATTTTGTAATA
ATAATGGTTATACCAAAGCACCATCAGGAGATATTATAGTAACAGTTCACAATTTTCATAAAAAGATGGATGTTTCTAAA
ACATTACCTATTTCTAAATGTAAGTTAATAAATGGTGATTATTATTATAATTTAAATGAATTCATAAGTATTTTAGGCTA
TGATGAATTTGTTCAAAATATATCTGATTATAGTGATGTTATATATAAATATGTGTATATAGGAATGGATGATGAGACAC
AGTTTACAATTCATGAAGCTTTAGATGCATTAGGGTTTATACCAGTTGTAGGTGATGTTATTGATGGTGTTAATGCTATT
ATGTATGCTTTGGAAAAAGATTATCTTAATGCAGCACTTAGTTTAGGAGCTATAATTCCAGTTATAGGTAGTCCATTCTT
TAAAGGTGGTAAATATGGATTTAAAATAATGAGTGGATTCTCAAAAGTTGCTAATAAATCCAAGAAATTTGTCAAAAAAC
TTGATATTACTGAAGGTAGGTATGTGTATAGAGCTATACATGATGCTGATTTACAAAGAATAAAAGATGGCTTAGGATTA
CAGGCAAAGAATCCTAATGGAACTTGGAGTTTAGAAGAACACATAGTTAGGGGATCAAATTCAGAATCATGGAAAAATGA
TAGATTTATATCAACATCGCTTGATTTAGAGATTTCAAGGATATTTAATTCTTCAAAAAATTTAGGTATAATAAAAATAG
ATTTAGAAAAAGTTCCAAAGGAATTAATATATAAATCATATAAGGAATTCCCTTTATATGATATTAATGGACACAGATCT
TTAGCTTATGAATTTTCAGTTTGGCAACAAGAAATAAGTATTCTTAAAGAAATTCCTAGGGATGCATTTGAATTTATAGA
ATAA

Upstream 100 bases:

>100_bases
TTAGAATAAAAAAGCTGATAAAAAAATCAGCTTTTTTTAATTTTCTTATTTACAAAATTAAAAAATCTCACTCTTTATAT
AGTGTAAAACAAATTCAAGC

Downstream 100 bases:

>100_bases
GTAAAAGGAGTAATTATGAGAAATATACGATATGTTTTAACTCCAGAGGCGTATGGTTCCAATGGTGAATTTATAGATAA
AATTGGTACATTAGGAGATT

Product: bacteriocin

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1067_residues
MILKIKSEVLKMIMRFIPSVNPGDSVGSKPTFPVNAQVKGDFLYLRDANGNQIAGRSVSDGDEITVLKVDHTKQLALVQY
PAGTIYRQGYVTNATSIIKYKNEYNWLNGSTPETVYDVDKKTQIGSLDPREKATILYKVDGMTALVYDTSKGKMTKSGLV
HYAGSGGSTGGGDINGIAPGGEVPGGFTYPNNAQVVGDDLYLRDANGNQISGRVVSNGDKITVLDVGYTKQLALVQYPAG
SVVRQGYVTNATNLIRYFKQGEWLNGSTTEPVLDENGGSLGSLSPYEAATPLYKKNGMTHVVYDTSKGPNTKSGYVKFEG
LPELPDTGIQIPSTSHSQATVEVYGTSGKGRPLKVYKIGSGSKVLFAGFALHGWEDNWSNDGLALVNIANSLIEKIGDYK
AQNGLHGWTVYIAPCMNPDGVVVKGTHNGPGRCAVTTRVDMNRCFPYKFSPQYISRNYTGPNPLGAPEAVALKNLVERIN
VSSSEMVVLDFHGWMNFTQGNAELGSYFGNQFGFGHKNLYSSGFFSSWATTLRNTKAVLIEYPTNTYSYNDVINKNYIGK
TFNGIINILKNNPNGGDVDNGGSDSSEIPYNANGEVINVEPTSALNVRSGPGTTYRAIGTLKLGNRVTILAKTKPAGETK
DWYKISFNYGSGYIRSDFVKLDSSEINYNAVGEIINVSSFLNVRSGPGTNFEMLGKLYKGDVVLIVSKNGDWYKIRYGTT
FGYIHKDYVYINKENDNFVEKKVQIGAVEINKVKTIDGIVFANINQMLKGFCNNNGYTKAPSGDIIVTVHNFHKKMDVSK
TLPISKCKLINGDYYYNLNEFISILGYDEFVQNISDYSDVIYKYVYIGMDDETQFTIHEALDALGFIPVVGDVIDGVNAI
MYALEKDYLNAALSLGAIIPVIGSPFFKGGKYGFKIMSGFSKVANKSKKFVKKLDITEGRYVYRAIHDADLQRIKDGLGL
QAKNPNGTWSLEEHIVRGSNSESWKNDRFISTSLDLEISRIFNSSKNLGIIKIDLEKVPKELIYKSYKEFPLYDINGHRS
LAYEFSVWQQEISILKEIPRDAFEFIE

Sequences:
NA

Specific function: NA

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA