| Definition | Clostridium perfringens ATCC 13124, complete genome. |
|---|---|
| Accession | NC_008261 |
| Length | 3,256,683 |
Click here to switch to the map view.
The map label for this gene is sleC
Identifier: 110801016
GI number:
Start: 3153204
End: 3154520
Strand: Reverse
Name: sleC
Synonym: CPF_2885
Alternate gene names: NA
Gene position: NA
Preceding gene: 110800108
Following gene: 110799727
Centisome position: NA
GC content: NA
Gene sequence:
>1317_bases ATGGCATTAGGTGGATTAAAAGTTCAATGTTTTAGTGAACAAAGGAGATATATACCTATTGATAAATGTAAGGTTAAAAT AACACCAACAGGAGAAGATGGTGTGGCTGTAGGAGATACTATAGAATTATATACAGATGATACTGGAAGCACTGACACTA TAGAATTAGATGCACCACCAATAGAAAATTCTAATCAACCAGGTACGATTCCTTATAGTTTCGCAGAGGTTATTGTTGAA AGAGAAGGATTTTTGCCTGTAGCAGTAAATGGAGTACAAATCTATCCTTCAAGAGTTGCTCTTCAAAATGTAAACTTACC TGAGACTAGAGGATATTATAGACAAGAGGAAGTTATTGATATACAACCTAATAGATTAGTTGGAAATTTCCCACCAAAGA TACCTGAAGTAGAGGAAAAGGAACTTCCACCACCAAAGGGAACAGTGGTTTTGCCAGAGCCTGTAGTTCCAGAGTATATA GTTGTTCATAATGGTAGACCAAATGATAATTCAGCAGCCAATTATAAGGTTAATTACAAAGACTATATAAAAAATGTTGC ATGTTGTGAAATTTTTTCAACATGGTCTGAAAATACTATAAGAGCTAATGTTTATGCCATAATATCATTTACTTTAAATA GAATATATACTGAATGGTATAGAGGAAAAGGTAAGAATTTTGATATAACTAATTCAACAGCTTTTGACCATGCTTTTAGT TATGGAAGAAACTTTTATGATAACATAAGTAGAATTGTAGATGAAATATTCTCAACATATATGAAAAGATTCAATTCTAA GCAGCCTCTTTTGGCACAATATTGTGATGGAATAAATGTACAATGTCCAGGTTGGATGACTCAATGGGGAAGTAAATACT TAGGAGACGAAGGAAAGGTTCCTTATGATATTTTAACATCTTTTTATGGAGATGATTTAGAATTAAAGTCTGCTAAAAAA GTTCAGGGAAGTCCAAGATCATTTCCAGGATATACTTTAGGTATTGGAGCTTCAGGTCAACCTGTAAGAGTTATACAAGA ACAATTAAATGCTATTTCAAAGGCGTATCCTTTAATACCTAAGGTTGCTGTAGACGGGAAATATGGTCAGAAAACTAGAG ATTCTGTTAGAACTTTTCAAAAGGTATTTAACCTTCCTCAAACAGGAGAGGTGGATTATGCAACATGGTATAAAATATCA GATGTCTATGTTGCAGTAACAAAAATAGCAGAGCTTAGATCAAGTGTTGAGAAGAAGATATTTTATCCACCAACAATAAT GGATAGATATGAAAATGTACCAAAGATAATTTATTAA
Upstream 100 bases:
>100_bases AAAATAATTTTGATTATATTTTAATTATAAATACTTATTAACAAAATAGATATTAATCTCATAAACTATAGGGTATTAAT TTATTATTAGGAGAAAGTAT
Downstream 100 bases:
>100_bases ATATTAAAGCTGAGCAAGTTATATAAATTGCTCAGCTTTTACTTTTTATCTTTGTTTTTTTAATTTAAAAAAGTAGAAGT AAATACATTGAACTATAAAT
Product: spore cortex-lytic enzyme SleC
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>438_residues MALGGLKVQCFSEQRRYIPIDKCKVKITPTGEDGVAVGDTIELYTDDTGSTDTIELDAPPIENSNQPGTIPYSFAEVIVE REGFLPVAVNGVQIYPSRVALQNVNLPETRGYYRQEEVIDIQPNRLVGNFPPKIPEVEEKELPPPKGTVVLPEPVVPEYI VVHNGRPNDNSAANYKVNYKDYIKNVACCEIFSTWSENTIRANVYAIISFTLNRIYTEWYRGKGKNFDITNSTAFDHAFS YGRNFYDNISRIVDEIFSTYMKRFNSKQPLLAQYCDGINVQCPGWMTQWGSKYLGDEGKVPYDILTSFYGDDLELKSAKK VQGSPRSFPGYTLGIGASGQPVRVIQEQLNAISKAYPLIPKVAVDGKYGQKTRDSVRTFQKVFNLPQTGEVDYATWYKIS DVYVAVTKIAELRSSVEKKIFYPPTIMDRYENVPKIIY
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA