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The map label for this gene is 110636396

Identifier: 110636396

GI number: 110636396

Start: 4380954

End: 4381937

Strand: Reverse

Name: 110636396

Synonym: Meso_4072

Alternate gene names: NA

Gene position: 4381937-4380954 (Counterclockwise)

Preceding gene: 110636397

Following gene: 110636394

Centisome position: 99.31

GC content: 61.79

Gene sequence:

>984_bases
ATGTTCAATCGCCTCTTCGGGTTCAACCGCCGGTCTTTCTCCTCCCTTTCCGAACAAGAGATCCTGGCTCTGGCGATTTC
GTCTGAAGAAGACGACGCGCGAATCTATCGCGCCTATGCGGACGGGCTCGCGGCGGATTACCCGCACTCGGCCGCCATGT
TCGAGGAGATGGCGGCGGAAGAAGACGAGCACCGGGAAGCGCTGATCGACATGCATCGCAGACGATTCGGCGAACGGATC
CCGCTCATCAGGCGCGAACATGTGCGAGGCTATTACCAGCGCCGGCCGGATTGGCTGGTGCGGCCACTTGGACTGGAGCA
TGTGCGCGCGCAGGCGGCACAGATGGAGGAGGAAGCGCAGCGCTTCTATACGGAAGCTGCAAAGCGCACCGAGGATGCCG
CCACGCGAAAGCTGCTGGGCTTTCTCGCGGCAGCCGAGCAAAAGCACGAGACGCTTGCCGAGCAGCTGGAGAAAAAGCAT
CTGGGACCTGAGGCGCGCAGCGAGGAAGAGCGGACCGAGAGAAGGCAATTCATTCTGACCTATGTCCAGCCGGGGCTTGC
AGGCCTCATGGACGGTTCGGTCTCCACGCTTGCGCCAATTTTCGCTGCCGCCTTCGCCACAGGCGACACGTGGCAGACAT
TCCTCGTGGGGCTTGCTGCTTCGATCGGCGCCGGCATTTCGATGGGATTCACGGAGGTGGCTTCCGACGACGGCATCATC
TCGGGACGGGGGTCACCGATAAAACGCGGCCTCACAACCGGCGTCATGACGGCACTTGGGGGGCTCGGCCATGCCCTGCC
CTATCTCATCCCGCATTTCTGGACGGCGACCATAATCGCCTTCATCGTCGTCTTCTTCGAGCTTTGGGCGATCGCGTTTA
TCCAGAACCGTTACATGGAGACGCCCTGGAGCCGCGCGACGTTCCAGGTCGTGCTGGGAGGAGCTTTGGTCTTCGCTACG
GGGATGCTGATCGGCAACGCGTGA

Upstream 100 bases:

>100_bases
GCGGCAGAGCAGCCTTGCGACGCAGGCACTTCCCGATCCTTGACGATTTAAAAGGGGAGACCTAGTTTAGAATTATTCTA
ATCAGGTGGGGTTCCCCGTT

Downstream 100 bases:

>100_bases
ACGGAGGCGGGTATGTCAGCATAATAGCCCTCCTCCACCAGCCAGCGGCTACGGAGGAGGGCTCGCGGTCAGTCAGCAGG
GAGATTATTGCACTGCGGCA

Product: rubrerythrin

Products: NA

Alternate protein names: Rubrerythrin Subfamily; Transmembrane Protein; Ferritin-Like Protein

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MFNRLFGFNRRSFSSLSEQEILALAISSEEDDARIYRAYADGLAADYPHSAAMFEEMAAEEDEHREALIDMHRRRFGERI
PLIRREHVRGYYQRRPDWLVRPLGLEHVRAQAAQMEEEAQRFYTEAAKRTEDAATRKLLGFLAAAEQKHETLAEQLEKKH
LGPEARSEEERTERRQFILTYVQPGLAGLMDGSVSTLAPIFAAAFATGDTWQTFLVGLAASIGAGISMGFTEVASDDGII
SGRGSPIKRGLTTGVMTALGGLGHALPYLIPHFWTATIIAFIVVFFELWAIAFIQNRYMETPWSRATFQVVLGGALVFAT
GMLIGNA

Sequences:

>Translated_327_residues
MFNRLFGFNRRSFSSLSEQEILALAISSEEDDARIYRAYADGLAADYPHSAAMFEEMAAEEDEHREALIDMHRRRFGERI
PLIRREHVRGYYQRRPDWLVRPLGLEHVRAQAAQMEEEAQRFYTEAAKRTEDAATRKLLGFLAAAEQKHETLAEQLEKKH
LGPEARSEEERTERRQFILTYVQPGLAGLMDGSVSTLAPIFAAAFATGDTWQTFLVGLAASIGAGISMGFTEVASDDGII
SGRGSPIKRGLTTGVMTALGGLGHALPYLIPHFWTATIIAFIVVFFELWAIAFIQNRYMETPWSRATFQVVLGGALVFAT
GMLIGNA
>Mature_327_residues
MFNRLFGFNRRSFSSLSEQEILALAISSEEDDARIYRAYADGLAADYPHSAAMFEEMAAEEDEHREALIDMHRRRFGERI
PLIRREHVRGYYQRRPDWLVRPLGLEHVRAQAAQMEEEAQRFYTEAAKRTEDAATRKLLGFLAAAEQKHETLAEQLEKKH
LGPEARSEEERTERRQFILTYVQPGLAGLMDGSVSTLAPIFAAAFATGDTWQTFLVGLAASIGAGISMGFTEVASDDGII
SGRGSPIKRGLTTGVMTALGGLGHALPYLIPHFWTATIIAFIVVFFELWAIAFIQNRYMETPWSRATFQVVLGGALVFAT
GMLIGNA

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36480; Mature: 36480

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRLFGFNRRSFSSLSEQEILALAISSEEDDARIYRAYADGLAADYPHSAAMFEEMAAE
CCCCHHCCCCHHHHHCCHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
EDEHREALIDMHRRRFGERIPLIRREHVRGYYQRRPDWLVRPLGLEHVRAQAAQMEEEAQ
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHH
RFYTEAAKRTEDAATRKLLGFLAAAEQKHETLAEQLEKKHLGPEARSEEERTERRQFILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
YVQPGLAGLMDGSVSTLAPIFAAAFATGDTWQTFLVGLAASIGAGISMGFTEVASDDGII
HHCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEE
SGRGSPIKRGLTTGVMTALGGLGHALPYLIPHFWTATIIAFIVVFFELWAIAFIQNRYME
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPWSRATFQVVLGGALVFATGMLIGNA
CCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNRLFGFNRRSFSSLSEQEILALAISSEEDDARIYRAYADGLAADYPHSAAMFEEMAAE
CCCCHHCCCCHHHHHCCHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
EDEHREALIDMHRRRFGERIPLIRREHVRGYYQRRPDWLVRPLGLEHVRAQAAQMEEEAQ
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHH
RFYTEAAKRTEDAATRKLLGFLAAAEQKHETLAEQLEKKHLGPEARSEEERTERRQFILT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
YVQPGLAGLMDGSVSTLAPIFAAAFATGDTWQTFLVGLAASIGAGISMGFTEVASDDGII
HHCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEE
SGRGSPIKRGLTTGVMTALGGLGHALPYLIPHFWTATIIAFIVVFFELWAIAFIQNRYME
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPWSRATFQVVLGGALVFATGMLIGNA
CCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA