Click here to switch to the map view.

The map label for this gene is 110636283

Identifier: 110636283

GI number: 110636283

Start: 4263401

End: 4264045

Strand: Reverse

Name: 110636283

Synonym: Meso_3959

Alternate gene names: NA

Gene position: 4264045-4263401 (Counterclockwise)

Preceding gene: 110636285

Following gene: 110636277

Centisome position: 96.64

GC content: 63.26

Gene sequence:

>645_bases
ATGAAAACCCGTCTTCTGCTGGCGGCTGCCGCGTTTGGGGCCGCGCTGGCGCTGCCCGGTGTTGCAGCGGCGGCCAACGC
GTTCACAACCGGCAATGTCAATATGCGTGCCGGCCCAAGTACGCAGTATCCAAGAGTAATGACGCTTCCACAGGGCGCAG
CCGTCGAGGTCTATGGCTGCACCAATGGCTGGAGGTGGTGCGATACGAGCTGGCGCGGCTATCGCGGCTGGGTCAGCGCA
TCTTACCTGCAAATGATGTATCGCGAACGCAGGGTCTATGTCCCGGAATATGCACCCCGTCTTGGCCTGCCCGTCATCAC
GTTCGAGTTCGGTTCCTACTGGGACCGGTGGTACAGCGACCGGCCCTGGTACCGCGATCGTGATCGGTGGCGTCGCGGGG
ACTGGGATCGCGACAGGCGGGACTGGGATGGCGATAGACGGGACCGGGACCGCGACAGATGGGACCGCGATCGCGATCGC
TGGGAACGTGAGCGGGACCGGGAAAGGGTTCGTGTGCAGCCTCGGGAGCGTGACCGAGCAGAAGATAGACGGTCAGGCTT
TGATATCCGCAGACGGGGCGACACCGGGCCACAGCGTGGCGAAGGCCCCGATAGATGTGGTCTTGCAGGGATAGTAAGGT
GCTAA

Upstream 100 bases:

>100_bases
AATCGGAGAACGCATGAGTCTCTTCCCCTCCCGGGGCTAGGAACTGTCCCTCCCCAAAAAGCGTTCCAAAAAGGAAGAGA
TGCGGAATAGGAGCTTTACG

Downstream 100 bases:

>100_bases
GCGCACCGCAGGTGTAAAGAGCCACTCGCGCCGCTCACATCCGAAGCGGCGCGATCAAGGCTGGCGAGCCTCGCAGAAAT
CGAACATTCTCTTGGAAGCA

Product: SH3, type 3

Products: NA

Alternate protein names: SH3 Type 3 Domain-Containing Protein; Bacterial SH3 Domain Family; SH3-Like Region

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKTRLLLAAAAFGAALALPGVAAAANAFTTGNVNMRAGPSTQYPRVMTLPQGAAVEVYGCTNGWRWCDTSWRGYRGWVSA
SYLQMMYRERRVYVPEYAPRLGLPVITFEFGSYWDRWYSDRPWYRDRDRWRRGDWDRDRRDWDGDRRDRDRDRWDRDRDR
WERERDRERVRVQPRERDRAEDRRSGFDIRRRGDTGPQRGEGPDRCGLAGIVRC

Sequences:

>Translated_214_residues
MKTRLLLAAAAFGAALALPGVAAAANAFTTGNVNMRAGPSTQYPRVMTLPQGAAVEVYGCTNGWRWCDTSWRGYRGWVSA
SYLQMMYRERRVYVPEYAPRLGLPVITFEFGSYWDRWYSDRPWYRDRDRWRRGDWDRDRRDWDGDRRDRDRDRWDRDRDR
WERERDRERVRVQPRERDRAEDRRSGFDIRRRGDTGPQRGEGPDRCGLAGIVRC
>Mature_214_residues
MKTRLLLAAAAFGAALALPGVAAAANAFTTGNVNMRAGPSTQYPRVMTLPQGAAVEVYGCTNGWRWCDTSWRGYRGWVSA
SYLQMMYRERRVYVPEYAPRLGLPVITFEFGSYWDRWYSDRPWYRDRDRWRRGDWDRDRRDWDGDRRDRDRDRWDRDRDR
WERERDRERVRVQPRERDRAEDRRSGFDIRRRGDTGPQRGEGPDRCGLAGIVRC

Specific function: Unknown

COG id: COG4991

COG function: function code S; Uncharacterized protein with a bacterial SH3 domain homologue

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25465; Mature: 25465

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRLLLAAAAFGAALALPGVAAAANAFTTGNVNMRAGPSTQYPRVMTLPQGAAVEVYGC
CCCHHHHHHHHHHHHHHCCCHHHHHCCEECCCEEECCCCCCCCCEEEECCCCCEEEEEEC
TNGWRWCDTSWRGYRGWVSASYLQMMYRERRVYVPEYAPRLGLPVITFEFGSYWDRWYSD
CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHCCC
RPWYRDRDRWRRGDWDRDRRDWDGDRRDRDRDRWDRDRDRWERERDRERVRVQPRERDRA
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHH
EDRRSGFDIRRRGDTGPQRGEGPDRCGLAGIVRC
HHHHCCCCEEECCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKTRLLLAAAAFGAALALPGVAAAANAFTTGNVNMRAGPSTQYPRVMTLPQGAAVEVYGC
CCCHHHHHHHHHHHHHHCCCHHHHHCCEECCCEEECCCCCCCCCEEEECCCCCEEEEEEC
TNGWRWCDTSWRGYRGWVSASYLQMMYRERRVYVPEYAPRLGLPVITFEFGSYWDRWYSD
CCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHCCC
RPWYRDRDRWRRGDWDRDRRDWDGDRRDRDRDRWDRDRDRWERERDRERVRVQPRERDRA
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHH
EDRRSGFDIRRRGDTGPQRGEGPDRCGLAGIVRC
HHHHCCCCEEECCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA