Click here to switch to the map view.

The map label for this gene is 110636136

Identifier: 110636136

GI number: 110636136

Start: 4121955

End: 4122554

Strand: Reverse

Name: 110636136

Synonym: Meso_3812

Alternate gene names: NA

Gene position: 4122554-4121955 (Counterclockwise)

Preceding gene: 110636157

Following gene: 110636125

Centisome position: 93.43

GC content: 60.67

Gene sequence:

>600_bases
ATGTGCAATGCCTACGAGCAACACGTCAAATGGGTTGAATACGTCAAGATGATGCAGGCGTTGGAATTGAACGTTCCGAC
GCAGCAAACCGAACTCGACCTTCCCTTCGCTAGCAACATTCGCATTAACGAGATGGGGCCGGTCATGAGGTCCACCGCGA
ACGACACCGAGATCGAGCTGGCGCCGATGAATTTCGGCCTGCCGTCCGACCAGCCCAAGCGCGGGCCTGTCTTCAACTTC
CGCTCGGAAGGCCGCGACTTCTCCAAGACGAGACGATGCCTGATCCCCTCGTCGGGCTTTTTCGAGTTCACGGGCAGCAA
ATATCCGAAGACCAAGCATCGCTTCACGCTAAACGATGCCCCGTTCATGGCGATCGCCGGCATCTGGCGTGAAGCCAAGG
GCAACCATCCGATGGCCTTCGCGATGCTGACGACCGAGCCCGGCCCGGACGTGAAGCCCTATCACGATCGCCAGATCGTG
GTTCTGCGCCCCGAGGATTGGGCAGCGTGGATCTGGCTGACGAGGCCGGAGTCGGAACTTCTCCATCCGCTCGGAGCCGG
ATCGCTTGCGGTCGAGACGGTGCGCAAGGGCGCCGCCTAG

Upstream 100 bases:

>100_bases
TGAAGACCCGCTTAGCGGTGCTTCAGCGCCAGCCGAGAGCCCGGCCCGGAGGGCGACGCCCAGCCTCGAAGTTCCCAGAT
TTTCGCGATAGACTTGCGCA

Downstream 100 bases:

>100_bases
CGACGTGCATCGCGAGCGGCGTGCGCCGCCTCGCGTCGGGAACGAATAGCCCATCGGACATAGCCGATCGCCATCAACGC
GAGAGCGGCGGCGGGTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MCNAYEQHVKWVEYVKMMQALELNVPTQQTELDLPFASNIRINEMGPVMRSTANDTEIELAPMNFGLPSDQPKRGPVFNF
RSEGRDFSKTRRCLIPSSGFFEFTGSKYPKTKHRFTLNDAPFMAIAGIWREAKGNHPMAFAMLTTEPGPDVKPYHDRQIV
VLRPEDWAAWIWLTRPESELLHPLGAGSLAVETVRKGAA

Sequences:

>Translated_199_residues
MCNAYEQHVKWVEYVKMMQALELNVPTQQTELDLPFASNIRINEMGPVMRSTANDTEIELAPMNFGLPSDQPKRGPVFNF
RSEGRDFSKTRRCLIPSSGFFEFTGSKYPKTKHRFTLNDAPFMAIAGIWREAKGNHPMAFAMLTTEPGPDVKPYHDRQIV
VLRPEDWAAWIWLTRPESELLHPLGAGSLAVETVRKGAA
>Mature_199_residues
MCNAYEQHVKWVEYVKMMQALELNVPTQQTELDLPFASNIRINEMGPVMRSTANDTEIELAPMNFGLPSDQPKRGPVFNF
RSEGRDFSKTRRCLIPSSGFFEFTGSKYPKTKHRFTLNDAPFMAIAGIWREAKGNHPMAFAMLTTEPGPDVKPYHDRQIV
VLRPEDWAAWIWLTRPESELLHPLGAGSLAVETVRKGAA

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22580; Mature: 22580

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNAYEQHVKWVEYVKMMQALELNVPTQQTELDLPFASNIRINEMGPVMRSTANDTEIEL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEECCCCCHHHCCCCCCEEEE
APMNFGLPSDQPKRGPVFNFRSEGRDFSKTRRCLIPSSGFFEFTGSKYPKTKHRFTLNDA
EECCCCCCCCCCCCCCEECCCCCCCCHHHHCEEECCCCCCEEECCCCCCCCCCEEEECCC
PFMAIAGIWREAKGNHPMAFAMLTTEPGPDVKPYHDRQIVVLRPEDWAAWIWLTRPESEL
CHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCHHHH
LHPLGAGSLAVETVRKGAA
HCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MCNAYEQHVKWVEYVKMMQALELNVPTQQTELDLPFASNIRINEMGPVMRSTANDTEIEL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEECCCCCHHHCCCCCCEEEE
APMNFGLPSDQPKRGPVFNFRSEGRDFSKTRRCLIPSSGFFEFTGSKYPKTKHRFTLNDA
EECCCCCCCCCCCCCCEECCCCCCCCHHHHCEEECCCCCCEEECCCCCCCCCCEEEECCC
PFMAIAGIWREAKGNHPMAFAMLTTEPGPDVKPYHDRQIVVLRPEDWAAWIWLTRPESEL
CHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCHHHH
LHPLGAGSLAVETVRKGAA
HCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA