| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110636122
Identifier: 110636122
GI number: 110636122
Start: 4102361
End: 4103452
Strand: Reverse
Name: 110636122
Synonym: Meso_3797
Alternate gene names: NA
Gene position: 4103452-4102361 (Counterclockwise)
Preceding gene: 110636123
Following gene: 110636121
Centisome position: 93.0
GC content: 54.85
Gene sequence:
>1092_bases ATGAACGAGCTGACGCTTCATCCGAATGTTTATGCGACCGGCCAAAGCAAGGGGTTGGTTTCAATCCTAGAGCGCGTCTG GCTCAGGGAGCAGCCGGTTGGCGAAGGCACTCTGTACCTGATGTCGGGTTTCGCAAACTATAACGGGGGCGTTCGCTTCT ATCCCGTGTTCCGGCACCACATCGAAAGGGGTGGGAAGGTCGTGGCGATCTTCGGCGGCAGTACAAGGCAGAACCTGAGC AGCAAGCAGGTTGTCGCCGAGCTATTGGACTGTGGAGCCGAGGTCCACATCGTCAACCGCAAGCGGCTTATGCATGCCAA GAGTTACGGGTCGAAGACGAACGAGGGCCAAATGGTCGTTGTCACCAGCGGGAACTTCACGGGACCTGGCATGGCACAAA ATGTCGAAATGGCCGTGCTGCTCGACCGACCCACAACGCATAACCTAGGATTCTGCTGGGATGAGATGGTCACTAGCATG CTCGCGCAGCGTTGGGATATGTACCAGCCGACCTTGACCGATAGAACGGCCCCAGCATGGCAGCTCCTATATGATGAGGA GGCAGGCGCGATTGTTCTCGATGAGACGGACGAGGTCACCATGATCCTCCGGCTCGGGCATGCAGATACAGCCCGGATCA ATGCCGTTCCGGGCTCCATAGCCGGTAGGGGAACACAGTATTTCTGGCTTAGCCGCGACTGCTACGACTTTTTTCCGGCT CTAACGATCCTCAACGAGCGGGGCCATAAGCGGACTTACTCTTGTCTCATCCAAATGAACTTTGTTGACATTGGAAGAGA GGAAGAAATTCGGGTTACGTTCGAGGCGGAGAACAATCTCGATTTTCGGCTTGGAACTGGCCCATATCGCTACACCGGCG TTGCGCGCGAGGGCGACCTTGCCGCTATATCACGGGTTGGCGAAAGCCGATACGAACTTAGGATATACCGGCAGGGAACC GACCTTTTTAGAAGATTATCGCCATACGCAATAAACTTCATAGGCCATCAAGGAAAGCAATACGGCTTCATTTCAAATCA AGAGTTTCAGGACGCCATAGGTACGCGGATTGGTAGGCGGCTGCACTCTTGA
Upstream 100 bases:
>100_bases GGAGTGTTGAAGAGCTGATGCCCCTGCAAACTTATCATCGCTACGGCTACCACATGAGCAATGCCGTCGCCGCTGAAACT CTCATCGTGCTGCGAAACAA
Downstream 100 bases:
>100_bases AGGTTCGCCGCCGGGAATTTACCGCAGTGTGACCTTTGCTGTCCGTCCGATCTAATCTTTTGCTACCCTGATCCGCTGAC TTTCCCTTGCCTGTGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNELTLHPNVYATGQSKGLVSILERVWLREQPVGEGTLYLMSGFANYNGGVRFYPVFRHHIERGGKVVAIFGGSTRQNLS SKQVVAELLDCGAEVHIVNRKRLMHAKSYGSKTNEGQMVVVTSGNFTGPGMAQNVEMAVLLDRPTTHNLGFCWDEMVTSM LAQRWDMYQPTLTDRTAPAWQLLYDEEAGAIVLDETDEVTMILRLGHADTARINAVPGSIAGRGTQYFWLSRDCYDFFPA LTILNERGHKRTYSCLIQMNFVDIGREEEIRVTFEAENNLDFRLGTGPYRYTGVAREGDLAAISRVGESRYELRIYRQGT DLFRRLSPYAINFIGHQGKQYGFISNQEFQDAIGTRIGRRLHS
Sequences:
>Translated_363_residues MNELTLHPNVYATGQSKGLVSILERVWLREQPVGEGTLYLMSGFANYNGGVRFYPVFRHHIERGGKVVAIFGGSTRQNLS SKQVVAELLDCGAEVHIVNRKRLMHAKSYGSKTNEGQMVVVTSGNFTGPGMAQNVEMAVLLDRPTTHNLGFCWDEMVTSM LAQRWDMYQPTLTDRTAPAWQLLYDEEAGAIVLDETDEVTMILRLGHADTARINAVPGSIAGRGTQYFWLSRDCYDFFPA LTILNERGHKRTYSCLIQMNFVDIGREEEIRVTFEAENNLDFRLGTGPYRYTGVAREGDLAAISRVGESRYELRIYRQGT DLFRRLSPYAINFIGHQGKQYGFISNQEFQDAIGTRIGRRLHS >Mature_363_residues MNELTLHPNVYATGQSKGLVSILERVWLREQPVGEGTLYLMSGFANYNGGVRFYPVFRHHIERGGKVVAIFGGSTRQNLS SKQVVAELLDCGAEVHIVNRKRLMHAKSYGSKTNEGQMVVVTSGNFTGPGMAQNVEMAVLLDRPTTHNLGFCWDEMVTSM LAQRWDMYQPTLTDRTAPAWQLLYDEEAGAIVLDETDEVTMILRLGHADTARINAVPGSIAGRGTQYFWLSRDCYDFFPA LTILNERGHKRTYSCLIQMNFVDIGREEEIRVTFEAENNLDFRLGTGPYRYTGVAREGDLAAISRVGESRYELRIYRQGT DLFRRLSPYAINFIGHQGKQYGFISNQEFQDAIGTRIGRRLHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41011; Mature: 41011
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELTLHPNVYATGQSKGLVSILERVWLREQPVGEGTLYLMSGFANYNGGVRFYPVFRHH CCCEEECCCEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHH IERGGKVVAIFGGSTRQNLSSKQVVAELLDCGAEVHIVNRKRLMHAKSYGSKTNEGQMVV HHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCCEEEE VTSGNFTGPGMAQNVEMAVLLDRPTTHNLGFCWDEMVTSMLAQRWDMYQPTLTDRTAPAW EECCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE QLLYDEEAGAIVLDETDEVTMILRLGHADTARINAVPGSIAGRGTQYFWLSRDCYDFFPA EEEEECCCCEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHH LTILNERGHKRTYSCLIQMNFVDIGREEEIRVTFEAENNLDFRLGTGPYRYTGVAREGDL HHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCEEEEEECCCCCH AAISRVGESRYELRIYRQGTDLFRRLSPYAINFIGHQGKQYGFISNQEFQDAIGTRIGRR HHHHHCCCCEEEEEEEECCHHHHHHCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHHH LHS HCC >Mature Secondary Structure MNELTLHPNVYATGQSKGLVSILERVWLREQPVGEGTLYLMSGFANYNGGVRFYPVFRHH CCCEEECCCEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHH IERGGKVVAIFGGSTRQNLSSKQVVAELLDCGAEVHIVNRKRLMHAKSYGSKTNEGQMVV HHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCCCEEEE VTSGNFTGPGMAQNVEMAVLLDRPTTHNLGFCWDEMVTSMLAQRWDMYQPTLTDRTAPAW EECCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE QLLYDEEAGAIVLDETDEVTMILRLGHADTARINAVPGSIAGRGTQYFWLSRDCYDFFPA EEEEECCCCEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHH LTILNERGHKRTYSCLIQMNFVDIGREEEIRVTFEAENNLDFRLGTGPYRYTGVAREGDL HHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCEEEEEECCCCCH AAISRVGESRYELRIYRQGTDLFRRLSPYAINFIGHQGKQYGFISNQEFQDAIGTRIGRR HHHHHCCCCEEEEEEEECCHHHHHHCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHHHH LHS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA