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The map label for this gene is yiaO [C]

Identifier: 110636040

GI number: 110636040

Start: 4009231

End: 4010244

Strand: Reverse

Name: yiaO [C]

Synonym: Meso_3715

Alternate gene names: 110636040

Gene position: 4010244-4009231 (Counterclockwise)

Preceding gene: 110636041

Following gene: 110636039

Centisome position: 90.88

GC content: 57.2

Gene sequence:

>1014_bases
ATGTTCAAGATGAGCCGACGCCTGTTACTGGCCGCAGCCGCCACAGGCTGTATATCGCTTGCCGCGCCTGCGGTGGCCCA
GGAAGTCAGACTGGACATGCAGGAATATTTCGGTCCGACCAATCTCTCGGGAACCGCCAGTTCCGATTTCGCGAAGCTGG
TTTCAGAAAAGACGAACGGCCAGGTCCAGATCAATGTTCACTTCAACGGCTCGTTGGGCCTGGGGGAAGCAGACATCCTG
AAGACAGTCGAGCAGGGCGTTGTGCCGCTCTCAACATCCATGCTCGATAAGATGCTCGGCACGATCCCGGTCGCCGCTAT
TCAGTCGGTGCCGTTCATGGCGACGTCGCTAGACGAGTCACGTGCGCTCTTCGAGTCTTTCGAGCCCTATGTCCGCGAGC
AGCTCGAAAGCCAAAATCAGATGCTTCTGTTCGAGGTGATCTCGCTGCCGGATGGACTCTGGTCGAAGAAGCCCGTTCCC
GACGTCGATGCATTGAAAACGCTGAAGACCCGCACCAACAGCCCGATTGCGACAAGAACCCTGAGTAATGTCGGCGCCTC
TCCGGTTCCCATGGCCTGGGGTGATGTTGCGCCGGCGCTGGTAACGGGCGTTATCGACTCCGTCATCACGACGGACGATA
ACGGGCTCCAGTCGCATCTTTACGAGCAGATGTCAGACTTCACACGGCTCAACATGTCGACGGCATTCTGGATCGTTCAC
ATGAATAAGGATGCCTACAATTCCCTTTCTCCCGACGAGCAGAAGGCTGTGCTGGAGGCCGCCGAGCAGGCGCGTTCCGA
CGCATATGACAGGGCGAAGGTGCGCCTCAAGGAAAACAGCGCTGAAATGATTTCGAAAGGCATTGCAGTGGCTGAAGAAA
TATCCATGCCGTTCCGGCAGGCGCTCATTGAAGCTGCGGCGCCTTTGCGCGATGAGTGGTCCCAGAAGGTCGGCGCGGAT
GTCAGCTCTGCGGTGCTGTCTTCCTATGAAGAAGCCAAAAAAGGGTCAAACTGA

Upstream 100 bases:

>100_bases
GGCGCGTTCCATTGACGAATTTGGTATTTCGTATACCATACACCGTCAACGACGTCGCTGATGAACGTCGTCCAAGCAAT
AGTGGAGGAGGAGAAATTCA

Downstream 100 bases:

>100_bases
TTTAGCCGACGCATACCCTCCCGGCTCGCGCAGGCGGGCCGGGGCTGATTCACACGGGAGGAGGTTTGCATGCTGGCGAG
GATTCTTGCTGCCACGGCGC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MFKMSRRLLLAAAATGCISLAAPAVAQEVRLDMQEYFGPTNLSGTASSDFAKLVSEKTNGQVQINVHFNGSLGLGEADIL
KTVEQGVVPLSTSMLDKMLGTIPVAAIQSVPFMATSLDESRALFESFEPYVREQLESQNQMLLFEVISLPDGLWSKKPVP
DVDALKTLKTRTNSPIATRTLSNVGASPVPMAWGDVAPALVTGVIDSVITTDDNGLQSHLYEQMSDFTRLNMSTAFWIVH
MNKDAYNSLSPDEQKAVLEAAEQARSDAYDRAKVRLKENSAEMISKGIAVAEEISMPFRQALIEAAAPLRDEWSQKVGAD
VSSAVLSSYEEAKKGSN

Sequences:

>Translated_337_residues
MFKMSRRLLLAAAATGCISLAAPAVAQEVRLDMQEYFGPTNLSGTASSDFAKLVSEKTNGQVQINVHFNGSLGLGEADIL
KTVEQGVVPLSTSMLDKMLGTIPVAAIQSVPFMATSLDESRALFESFEPYVREQLESQNQMLLFEVISLPDGLWSKKPVP
DVDALKTLKTRTNSPIATRTLSNVGASPVPMAWGDVAPALVTGVIDSVITTDDNGLQSHLYEQMSDFTRLNMSTAFWIVH
MNKDAYNSLSPDEQKAVLEAAEQARSDAYDRAKVRLKENSAEMISKGIAVAEEISMPFRQALIEAAAPLRDEWSQKVGAD
VSSAVLSSYEEAKKGSN
>Mature_337_residues
MFKMSRRLLLAAAATGCISLAAPAVAQEVRLDMQEYFGPTNLSGTASSDFAKLVSEKTNGQVQINVHFNGSLGLGEADIL
KTVEQGVVPLSTSMLDKMLGTIPVAAIQSVPFMATSLDESRALFESFEPYVREQLESQNQMLLFEVISLPDGLWSKKPVP
DVDALKTLKTRTNSPIATRTLSNVGASPVPMAWGDVAPALVTGVIDSVITTDDNGLQSHLYEQMSDFTRLNMSTAFWIVH
MNKDAYNSLSPDEQKAVLEAAEQARSDAYDRAKVRLKENSAEMISKGIAVAEEISMPFRQALIEAAAPLRDEWSQKVGAD
VSSAVLSSYEEAKKGSN

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=327, Percent_Identity=25.0764525993884, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36511; Mature: 36511

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKMSRRLLLAAAATGCISLAAPAVAQEVRLDMQEYFGPTNLSGTASSDFAKLVSEKTNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
QVQINVHFNGSLGLGEADILKTVEQGVVPLSTSMLDKMLGTIPVAAIQSVPFMATSLDES
EEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHH
RALFESFEPYVREQLESQNQMLLFEVISLPDGLWSKKPVPDVDALKTLKTRTNSPIATRT
HHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
LSNVGASPVPMAWGDVAPALVTGVIDSVITTDDNGLQSHLYEQMSDFTRLNMSTAFWIVH
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
MNKDAYNSLSPDEQKAVLEAAEQARSDAYDRAKVRLKENSAEMISKGIAVAEEISMPFRQ
ECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHH
ALIEAAAPLRDEWSQKVGADVSSAVLSSYEEAKKGSN
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFKMSRRLLLAAAATGCISLAAPAVAQEVRLDMQEYFGPTNLSGTASSDFAKLVSEKTNG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
QVQINVHFNGSLGLGEADILKTVEQGVVPLSTSMLDKMLGTIPVAAIQSVPFMATSLDES
EEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHH
RALFESFEPYVREQLESQNQMLLFEVISLPDGLWSKKPVPDVDALKTLKTRTNSPIATRT
HHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
LSNVGASPVPMAWGDVAPALVTGVIDSVITTDDNGLQSHLYEQMSDFTRLNMSTAFWIVH
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE
MNKDAYNSLSPDEQKAVLEAAEQARSDAYDRAKVRLKENSAEMISKGIAVAEEISMPFRQ
ECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHH
ALIEAAAPLRDEWSQKVGADVSSAVLSSYEEAKKGSN
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]