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The map label for this gene is mmgC [H]

Identifier: 110633080

GI number: 110633080

Start: 798046

End: 799821

Strand: Direct

Name: mmgC [H]

Synonym: Meso_0723

Alternate gene names: 110633080

Gene position: 798046-799821 (Clockwise)

Preceding gene: 110633078

Following gene: 110633082

Centisome position: 18.09

GC content: 63.8

Gene sequence:

>1776_bases
ATGTATCGCGCGCCGGTCGAGGCCATCATTCGAACCCTGAACGCGATGGGATTGAAAGACATCCTGGATCAGGGCCTTGT
CGAAGGTCTGTCACCTGATCTCGTCCGGGCCGTGCTTGCGGAAGCCGCCCGGTTTGCGGGTGAGGAAATCGCCCCGCTTG
CTGAGATTGGAGATGTGGAAGGAGCAAGGCTGGAAAACGCCGTGGTGACGACGCCCAAGGGCTGGCCCGCGCTCTACCGC
AGATGGTGCGAAGGCGGATGGAACGCGCTCGCCGCGCCGACGCGATGGGGCGGCCAAGGCCTGCCCACGATGCTTTCGGT
TGCCGCCCTCGAAATGTGGAACTCCGCATCCATGGCTTTCGCGCTGGGGCCGACGCTTACCATGGGCGCGGTGGAGGCGC
TGGAGCGGCATGCAACCGATGCGCTCAGGCAGACCTATATGGAAAAGCTCGTTTCCGGCGAGTGGATGGCCACGATGAAC
CTGACGGAACCGCAGGCCGGCTCCGACCTAGGCGCCCTGCGCACGCGTGCCGAGCGCGCCGGTGACGGCACATACCGCAT
ATTCGGCCAGAAGATCTTCATCACCTATGGCGAGCACGACCTGACAGAGAACATCGTGCATATGGTGTTGGCGCGGCTGC
CCGACGCGCCGGCTGGCAGCAAAGGCATCTCCCTTTTTCTCGTTCCCAAGTTCCTTGTGGGCGAGGATGGCTCGCTTGGT
CCACGCAATGATGTCTTCTGCGCCTCGATCGAGCACAAGCTCGGCCTTCACGCCTCGCCCACCTGCACCATGATTTATGG
CGATGGCAGGTTCGGCGACGAGCCGGGAGCGGTCGGCTGGCTGGTGGGCGAGGAGAACAGGGGCCTCGCCTGCATGTTCA
CCATGATGAACAATGCGCGGCTTGCCGTCGGCATGGAGGGCGTGGCCGTGGCGGAAGCGGCCTACCAGAAGGCTCTGGCC
TATGCGAAGGAGCGCCGCCAGGGCCGCGCGCCAGGCTGGAGCGGCGAGGGCATGAGCCCGATTGCTGCGCATCCCGATAT
AAAGCGCATGCTGCTTTCGATGAAATCCCTTGCCGAGATATCCAGGGCCATCACCTATTCCTGTGCGCACGCCGTGGACA
TGGCCCGGCTCGCCGAGCCCGAACGAAGAACGCATTGGCAGGAGCGTGCCAATTTGCTCACTCCCGTTGCGAAGGCCTTT
GCCACGGATGGGGGCGTCGAGGCTGCCTCGCTCGGCATTCAGGTTCACGGCGGCATGGGCTTCATCGAGGAGACCGGCGC
CGCCGTCTATTATCGCGACATACGCGTCGCCCCCATTTATGAGGGGACGAACGGCATCCAGGCCATCGATCTGGTAATGC
GCAAGCTTCCCCAGTCGGGCGGAGACCACGTACGCGGCTATATCTCCGAGCTGCGGCGCGACGTGGAAACCATGCGCGGC
AGCAATATGCCGGAATTCGCTGAGGCCGGGATGGCGCTTACGGCGGCCCTCGATGATCTGGAGCAGGCCACCGAACACCT
CCTGAGCCTCCTAGAAGAGGGGAATCTGGAGATCGCCCTTTGTGGCGCCACACCGTATCTGCGGCTTTTCGCGCTTGCCG
CCGGCAACGTCCTGATCTCCCGCGCGGCGGTCTCCAGTTCCGATGCCGGCCTTGCCCGGCTTTGCCGCTTTGCGGCGGAA
AACCATCTTGGCGAGACCGCCTCTTTGAAACGCGCGGTTATGACGGGCGGAGAAAGCCTGCTCGCGGCGGCAGACGGTCT
GGAAGAGATGGCATGA

Upstream 100 bases:

>100_bases
GGAGTGATTTGACCTTTACGTAAGCAATAGTTCCTTTCTGGCTGGCGGAGCAGCAGCTTCACCGTTAGCTTTGCAATGCA
TACATCCGAAGGAGTGACGA

Downstream 100 bases:

>100_bases
GCGGTCAAATCCAGGCTGAAGCGCCGCGAGGCGGTACTGATCGTCGCCGCGCGTGTGCTCGCCCTGTCAGGGATAAAGAC
GCGTTTTCGTCCATAACCCG

Product: acyl-CoA dehydrogenase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MYRAPVEAIIRTLNAMGLKDILDQGLVEGLSPDLVRAVLAEAARFAGEEIAPLAEIGDVEGARLENAVVTTPKGWPALYR
RWCEGGWNALAAPTRWGGQGLPTMLSVAALEMWNSASMAFALGPTLTMGAVEALERHATDALRQTYMEKLVSGEWMATMN
LTEPQAGSDLGALRTRAERAGDGTYRIFGQKIFITYGEHDLTENIVHMVLARLPDAPAGSKGISLFLVPKFLVGEDGSLG
PRNDVFCASIEHKLGLHASPTCTMIYGDGRFGDEPGAVGWLVGEENRGLACMFTMMNNARLAVGMEGVAVAEAAYQKALA
YAKERRQGRAPGWSGEGMSPIAAHPDIKRMLLSMKSLAEISRAITYSCAHAVDMARLAEPERRTHWQERANLLTPVAKAF
ATDGGVEAASLGIQVHGGMGFIEETGAAVYYRDIRVAPIYEGTNGIQAIDLVMRKLPQSGGDHVRGYISELRRDVETMRG
SNMPEFAEAGMALTAALDDLEQATEHLLSLLEEGNLEIALCGATPYLRLFALAAGNVLISRAAVSSSDAGLARLCRFAAE
NHLGETASLKRAVMTGGESLLAAADGLEEMA

Sequences:

>Translated_591_residues
MYRAPVEAIIRTLNAMGLKDILDQGLVEGLSPDLVRAVLAEAARFAGEEIAPLAEIGDVEGARLENAVVTTPKGWPALYR
RWCEGGWNALAAPTRWGGQGLPTMLSVAALEMWNSASMAFALGPTLTMGAVEALERHATDALRQTYMEKLVSGEWMATMN
LTEPQAGSDLGALRTRAERAGDGTYRIFGQKIFITYGEHDLTENIVHMVLARLPDAPAGSKGISLFLVPKFLVGEDGSLG
PRNDVFCASIEHKLGLHASPTCTMIYGDGRFGDEPGAVGWLVGEENRGLACMFTMMNNARLAVGMEGVAVAEAAYQKALA
YAKERRQGRAPGWSGEGMSPIAAHPDIKRMLLSMKSLAEISRAITYSCAHAVDMARLAEPERRTHWQERANLLTPVAKAF
ATDGGVEAASLGIQVHGGMGFIEETGAAVYYRDIRVAPIYEGTNGIQAIDLVMRKLPQSGGDHVRGYISELRRDVETMRG
SNMPEFAEAGMALTAALDDLEQATEHLLSLLEEGNLEIALCGATPYLRLFALAAGNVLISRAAVSSSDAGLARLCRFAAE
NHLGETASLKRAVMTGGESLLAAADGLEEMA
>Mature_591_residues
MYRAPVEAIIRTLNAMGLKDILDQGLVEGLSPDLVRAVLAEAARFAGEEIAPLAEIGDVEGARLENAVVTTPKGWPALYR
RWCEGGWNALAAPTRWGGQGLPTMLSVAALEMWNSASMAFALGPTLTMGAVEALERHATDALRQTYMEKLVSGEWMATMN
LTEPQAGSDLGALRTRAERAGDGTYRIFGQKIFITYGEHDLTENIVHMVLARLPDAPAGSKGISLFLVPKFLVGEDGSLG
PRNDVFCASIEHKLGLHASPTCTMIYGDGRFGDEPGAVGWLVGEENRGLACMFTMMNNARLAVGMEGVAVAEAAYQKALA
YAKERRQGRAPGWSGEGMSPIAAHPDIKRMLLSMKSLAEISRAITYSCAHAVDMARLAEPERRTHWQERANLLTPVAKAF
ATDGGVEAASLGIQVHGGMGFIEETGAAVYYRDIRVAPIYEGTNGIQAIDLVMRKLPQSGGDHVRGYISELRRDVETMRG
SNMPEFAEAGMALTAALDDLEQATEHLLSLLEEGNLEIALCGATPYLRLFALAAGNVLISRAAVSSSDAGLARLCRFAAE
NHLGETASLKRAVMTGGESLLAAADGLEEMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=411, Percent_Identity=24.8175182481752, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI4501857, Length=349, Percent_Identity=25.5014326647564, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI4557233, Length=427, Percent_Identity=26.9320843091335, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI226958412, Length=431, Percent_Identity=25.0580046403712, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI226958414, Length=366, Percent_Identity=25.4098360655738, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI76496475, Length=421, Percent_Identity=26.603325415677, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI4557235, Length=462, Percent_Identity=26.1904761904762, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI7656849, Length=388, Percent_Identity=27.319587628866, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI21361497, Length=391, Percent_Identity=23.7851662404092, Blast_Score=81, Evalue=3e-15,
Organism=Escherichia coli, GI87082384, Length=351, Percent_Identity=28.4900284900285, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI87081958, Length=370, Percent_Identity=26.7567567567568, Blast_Score=72, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=416, Percent_Identity=25.7211538461538, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=412, Percent_Identity=26.4563106796117, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17569725, Length=363, Percent_Identity=28.099173553719, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=358, Percent_Identity=25.9776536312849, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=433, Percent_Identity=27.2517321016166, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI86563383, Length=403, Percent_Identity=27.7915632754342, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=403, Percent_Identity=27.7915632754342, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=428, Percent_Identity=24.7663551401869, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=378, Percent_Identity=25.6613756613757, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=333, Percent_Identity=27.027027027027, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=379, Percent_Identity=23.7467018469657, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=379, Percent_Identity=24.0105540897098, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=256, Percent_Identity=25, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI21356377, Length=378, Percent_Identity=28.8359788359788, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24646207, Length=427, Percent_Identity=27.8688524590164, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24666513, Length=406, Percent_Identity=25.3694581280788, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI21355753, Length=438, Percent_Identity=26.7123287671233, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281363737, Length=397, Percent_Identity=23.1738035264484, Blast_Score=93, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63263; Mature: 63263

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRAPVEAIIRTLNAMGLKDILDQGLVEGLSPDLVRAVLAEAARFAGEEIAPLAEIGDVE
CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
GARLENAVVTTPKGWPALYRRWCEGGWNALAAPTRWGGQGLPTMLSVAALEMWNSASMAF
CCEECCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
ALGPTLTMGAVEALERHATDALRQTYMEKLVSGEWMATMNLTEPQAGSDLGALRTRAERA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHC
GDGTYRIFGQKIFITYGEHDLTENIVHMVLARLPDAPAGSKGISLFLVPKFLVGEDGSLG
CCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHCCCCCCCC
PRNDVFCASIEHKLGLHASPTCTMIYGDGRFGDEPGAVGWLVGEENRGLACMFTMMNNAR
CCCCEEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCE
LAVGMEGVAVAEAAYQKALAYAKERRQGRAPGWSGEGMSPIAAHPDIKRMLLSMKSLAEI
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SRAITYSCAHAVDMARLAEPERRTHWQERANLLTPVAKAFATDGGVEAASLGIQVHGGMG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC
FIEETGAAVYYRDIRVAPIYEGTNGIQAIDLVMRKLPQSGGDHVRGYISELRRDVETMRG
CHHHCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
SNMPEFAEAGMALTAALDDLEQATEHLLSLLEEGNLEIALCGATPYLRLFALAAGNVLIS
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCHHHH
RAAVSSSDAGLARLCRFAAENHLGETASLKRAVMTGGESLLAAADGLEEMA
HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MYRAPVEAIIRTLNAMGLKDILDQGLVEGLSPDLVRAVLAEAARFAGEEIAPLAEIGDVE
CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
GARLENAVVTTPKGWPALYRRWCEGGWNALAAPTRWGGQGLPTMLSVAALEMWNSASMAF
CCEECCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE
ALGPTLTMGAVEALERHATDALRQTYMEKLVSGEWMATMNLTEPQAGSDLGALRTRAERA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHC
GDGTYRIFGQKIFITYGEHDLTENIVHMVLARLPDAPAGSKGISLFLVPKFLVGEDGSLG
CCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHCCCCCCCC
PRNDVFCASIEHKLGLHASPTCTMIYGDGRFGDEPGAVGWLVGEENRGLACMFTMMNNAR
CCCCEEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCE
LAVGMEGVAVAEAAYQKALAYAKERRQGRAPGWSGEGMSPIAAHPDIKRMLLSMKSLAEI
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SRAITYSCAHAVDMARLAEPERRTHWQERANLLTPVAKAFATDGGVEAASLGIQVHGGMG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCC
FIEETGAAVYYRDIRVAPIYEGTNGIQAIDLVMRKLPQSGGDHVRGYISELRRDVETMRG
CHHHCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
SNMPEFAEAGMALTAALDDLEQATEHLLSLLEEGNLEIALCGATPYLRLFALAAGNVLIS
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCHHHH
RAAVSSSDAGLARLCRFAAENHLGETASLKRAVMTGGESLLAAADGLEEMA
HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]