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The map label for this gene is ygjR [C]

Identifier: 110633035

GI number: 110633035

Start: 755212

End: 756198

Strand: Direct

Name: ygjR [C]

Synonym: Meso_0678

Alternate gene names: 110633035

Gene position: 755212-756198 (Clockwise)

Preceding gene: 110633034

Following gene: 110633036

Centisome position: 17.12

GC content: 61.3

Gene sequence:

>987_bases
ATGTTCCGTTGGGGTATTTTGTCTACGGCCAAGATCGGCCGCGAACATGTCATTCCTCAGCTTCTGGACGCGGAGAATGG
CGTCGTCACCGCGATCGCCAGCCGCGACGAGGCGCGGGGGAAGGCTATCGCCGAGCGCTTCGGCATCCCCAATGCCTTCT
CCTCCTATGAAGCGCTGCTTGCCTCGCCGGAGGTGGACGGCGTCTATATCCCTCTGCCCACCTCGCAGCATGTGGAGTGG
GCGGTGAAAGCGGCCGATGCGGGCAAGCATGTGCTGGTGGAAAAGCCTCTCGCGCTCAAGGCCGAGGATATAGTCCGGGT
GATCGAAGCGCGAGACCGCAACGGCGTTCTGATCTGCGAAGCTTTCATGGTGACCTACCATCCTCAGTGGAGGAAAGTGC
GCGAGCTGATCGCCGAGGATGCCATCGGCCGGCTGCGCCATGTGCAGGGCGCGTTTACCTATCACAATGTCGACCCGTCC
AATATGCGCAACCAGCTGGAGCTCGGCGGCGGCGGTCTGCCGGATATCGGTGTCTATCCCACCGTCACCACGCGATTCGT
CACCGGGAAGGAGCCGGTCCGTATTCAGGCCTCGGTTGAGCGCGATCAAACCTTCGGCACAGATATCTATGCCAGCGTGA
AGGCCGAGTTCGGAGGTTTCGAGATGAGCTTTTACGTGGCCACCCAGATGGCCGCGCGTCAGGTGATGGTCTTCCACGGC
GATAAGGGCTTCATAGAGGTGGAGACGCCCTTCAATTCGCGCATCTACGGAGACGACCGCGTGACGCTGCACAACGCAAA
CCATGCGCAGTCCACCGTCTTCCGCTTCGGCGATACGCGGCAATACCGTCTTCAGGCGGAAGCCTTCGCCCGTGCCGTGG
CAGGGGAAGATGTGCAGGTCTTCACCCTTGAGGATTCGCTTAGGAACCAGAGGGTGATTGATGCGATCTACCGCGCCGCG
GCGCAAGACGGCTGGGAGACCGTCTGA

Upstream 100 bases:

>100_bases
GATGAGGATTTCGAGGCGCTGGCGAACCGGATTGTCGAAAATGTCCGCAAGCAGACAGGTGGCGTGCTGAGAAGCTGAAA
CACCGGAAGGGAGGAAGGGC

Downstream 100 bases:

>100_bases
ACCTGGTGATGGCCCGTGAACAACGGGCAGAAGCTGTCTTGCACGAAAAAATTGCGGTTCTTATATACGCCGCATGTTTC
GGAGCTGCGTTTTGTGACAG

Product: oxidoreductase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MFRWGILSTAKIGREHVIPQLLDAENGVVTAIASRDEARGKAIAERFGIPNAFSSYEALLASPEVDGVYIPLPTSQHVEW
AVKAADAGKHVLVEKPLALKAEDIVRVIEARDRNGVLICEAFMVTYHPQWRKVRELIAEDAIGRLRHVQGAFTYHNVDPS
NMRNQLELGGGGLPDIGVYPTVTTRFVTGKEPVRIQASVERDQTFGTDIYASVKAEFGGFEMSFYVATQMAARQVMVFHG
DKGFIEVETPFNSRIYGDDRVTLHNANHAQSTVFRFGDTRQYRLQAEAFARAVAGEDVQVFTLEDSLRNQRVIDAIYRAA
AQDGWETV

Sequences:

>Translated_328_residues
MFRWGILSTAKIGREHVIPQLLDAENGVVTAIASRDEARGKAIAERFGIPNAFSSYEALLASPEVDGVYIPLPTSQHVEW
AVKAADAGKHVLVEKPLALKAEDIVRVIEARDRNGVLICEAFMVTYHPQWRKVRELIAEDAIGRLRHVQGAFTYHNVDPS
NMRNQLELGGGGLPDIGVYPTVTTRFVTGKEPVRIQASVERDQTFGTDIYASVKAEFGGFEMSFYVATQMAARQVMVFHG
DKGFIEVETPFNSRIYGDDRVTLHNANHAQSTVFRFGDTRQYRLQAEAFARAVAGEDVQVFTLEDSLRNQRVIDAIYRAA
AQDGWETV
>Mature_328_residues
MFRWGILSTAKIGREHVIPQLLDAENGVVTAIASRDEARGKAIAERFGIPNAFSSYEALLASPEVDGVYIPLPTSQHVEW
AVKAADAGKHVLVEKPLALKAEDIVRVIEARDRNGVLICEAFMVTYHPQWRKVRELIAEDAIGRLRHVQGAFTYHNVDPS
NMRNQLELGGGGLPDIGVYPTVTTRFVTGKEPVRIQASVERDQTFGTDIYASVKAEFGGFEMSFYVATQMAARQVMVFHG
DKGFIEVETPFNSRIYGDDRVTLHNANHAQSTVFRFGDTRQYRLQAEAFARAVAGEDVQVFTLEDSLRNQRVIDAIYRAA
AQDGWETV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=253, Percent_Identity=29.6442687747036, Blast_Score=98, Evalue=8e-21,
Organism=Escherichia coli, GI145693182, Length=240, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082405, Length=146, Percent_Identity=30.8219178082192, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1787574, Length=316, Percent_Identity=22.4683544303797, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581117, Length=325, Percent_Identity=29.2307692307692, Blast_Score=118, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24584727, Length=251, Percent_Identity=25.0996015936255, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581115, Length=327, Percent_Identity=25.0764525993884, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36529; Mature: 36529

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRWGILSTAKIGREHVIPQLLDAENGVVTAIASRDEARGKAIAERFGIPNAFSSYEALL
CCCCCCCCHHHHCHHHHCHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHH
ASPEVDGVYIPLPTSQHVEWAVKAADAGKHVLVEKPLALKAEDIVRVIEARDRNGVLICE
CCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEE
AFMVTYHPQWRKVRELIAEDAIGRLRHVQGAFTYHNVDPSNMRNQLELGGGGLPDIGVYP
EEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHCEEEECCCCCCCCCCCC
TVTTRFVTGKEPVRIQASVERDQTFGTDIYASVKAEFGGFEMSFYVATQMAARQVMVFHG
CEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHCEEEEEEC
DKGFIEVETPFNSRIYGDDRVTLHNANHAQSTVFRFGDTRQYRLQAEAFARAVAGEDVQV
CCCEEEEECCCCCEEECCCEEEEECCCCCHHHHEECCCCCEEEEHHHHHHHHHCCCCEEE
FTLEDSLRNQRVIDAIYRAAAQDGWETV
EEECHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFRWGILSTAKIGREHVIPQLLDAENGVVTAIASRDEARGKAIAERFGIPNAFSSYEALL
CCCCCCCCHHHHCHHHHCHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHH
ASPEVDGVYIPLPTSQHVEWAVKAADAGKHVLVEKPLALKAEDIVRVIEARDRNGVLICE
CCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEE
AFMVTYHPQWRKVRELIAEDAIGRLRHVQGAFTYHNVDPSNMRNQLELGGGGLPDIGVYP
EEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHCEEEECCCCCCCCCCCC
TVTTRFVTGKEPVRIQASVERDQTFGTDIYASVKAEFGGFEMSFYVATQMAARQVMVFHG
CEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEHHHHHHHHCEEEEEEC
DKGFIEVETPFNSRIYGDDRVTLHNANHAQSTVFRFGDTRQYRLQAEAFARAVAGEDVQV
CCCEEEEECCCCCEEECCCEEEEECCCCCHHHHEECCCCCEEEEHHHHHHHHHCCCCEEE
FTLEDSLRNQRVIDAIYRAAAQDGWETV
EEECHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]