| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is exoM [H]
Identifier: 110633015
GI number: 110633015
Start: 735504
End: 736454
Strand: Direct
Name: exoM [H]
Synonym: Meso_0658
Alternate gene names: 110633015
Gene position: 735504-736454 (Clockwise)
Preceding gene: 110633014
Following gene: 110633016
Centisome position: 16.67
GC content: 64.56
Gene sequence:
>951_bases ATGACGGACGCCATCATATCCGACGCCATAGATATCTGCGTCTGCACGTTCCGGCGTCCCGCGCTCGCGCAGACTCTGCG CTCCCTGGCGGGTTTGAAGCTTCCTGAAAACTACAAGGTAAGCATCATTATCGCCGACAACGACGATAGTCCCACCGCGC GGGACCTCGTGATCGGCATGATGGACGAACTCCGGCCCCCGGTTCACTACATCCATGCTCCCGCGCGCAACATCTCGCTC GCCCGCAATGCATGTCTGGACGCAAGCTACGCGCGCTTTGTGGCTTTCATCGACGATGATGAGACGGCGACGGAGGAGTG GCTCCTGCGCCTCGTCAAGGCGGCGGAGGGTAGCCGCGCGGATGTCGTGCTCGGCCCGGTGCGCGCCGGCTATGGAGTGG ATGCGCCCGAATGGATGCGCCGTGGCGACTTTCATTCCACCTTCCCGGTTTGCGCGGGCGGCGAGATCCGCACGGGCTAC ACCTGCAACGTTTTGATGCGCATGGATGCAAAGGCGATACGCGGCCGCCGCTTTCGCCTCGACCGGGGCCAGACCGGTGG AGAGGATACCGCCTTCTTCGATGAGGTCTACCGGGCGGGCGGCAGGATCGTCTATGCGCCGGACGCCTGGACCGACGAGA TCGTGCCCAAGGACCGCGCCACCTTCGGCTGGCTGCTGCGCAGGCGCTATCGGGTGGGGCAAACACACGGCAGGCTCCTG GCGGATCATAAGTCGGGATTGGGCTTTGCCGCCGCACTTGCCTTGGTGGCCGCCAAGATCGCCTATTGCGCGGGCTGCAC TCTCCTCACCGCACCATGGACCATGAGCCGCAACCGCAACATCCTGCGCGGGGCGATGCATGCGGGTGCGCTAAGCGGTC TTCTCGGGGGCAACGAGCTTCGCCAGTACGGAATCCAGACGGCAGGCGAGGGCCATGGGCATGCAACCTGA
Upstream 100 bases:
>100_bases TCCTCCTTGCCGGGCCTTCGGCCATGATCATGCATTTCGCCTGGTCGGCGGGGTTTTGGCTGCAGCTTCTCTCGGCCGGG CTGCGGCGGAGGGAAGCGGC
Downstream 100 bases:
>100_bases AATCTGGCCAGGTTTTTCGATGACGAGAACAGCGGCGAAGAAGCCGCAATCTATGGGACGGGGGATTACACCGCAGCGCT TTTTTGTGGCGGCTGCACAG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTDAIISDAIDICVCTFRRPALAQTLRSLAGLKLPENYKVSIIIADNDDSPTARDLVIGMMDELRPPVHYIHAPARNISL ARNACLDASYARFVAFIDDDETATEEWLLRLVKAAEGSRADVVLGPVRAGYGVDAPEWMRRGDFHSTFPVCAGGEIRTGY TCNVLMRMDAKAIRGRRFRLDRGQTGGEDTAFFDEVYRAGGRIVYAPDAWTDEIVPKDRATFGWLLRRRYRVGQTHGRLL ADHKSGLGFAAALALVAAKIAYCAGCTLLTAPWTMSRNRNILRGAMHAGALSGLLGGNELRQYGIQTAGEGHGHAT
Sequences:
>Translated_316_residues MTDAIISDAIDICVCTFRRPALAQTLRSLAGLKLPENYKVSIIIADNDDSPTARDLVIGMMDELRPPVHYIHAPARNISL ARNACLDASYARFVAFIDDDETATEEWLLRLVKAAEGSRADVVLGPVRAGYGVDAPEWMRRGDFHSTFPVCAGGEIRTGY TCNVLMRMDAKAIRGRRFRLDRGQTGGEDTAFFDEVYRAGGRIVYAPDAWTDEIVPKDRATFGWLLRRRYRVGQTHGRLL ADHKSGLGFAAALALVAAKIAYCAGCTLLTAPWTMSRNRNILRGAMHAGALSGLLGGNELRQYGIQTAGEGHGHAT >Mature_315_residues TDAIISDAIDICVCTFRRPALAQTLRSLAGLKLPENYKVSIIIADNDDSPTARDLVIGMMDELRPPVHYIHAPARNISLA RNACLDASYARFVAFIDDDETATEEWLLRLVKAAEGSRADVVLGPVRAGYGVDAPEWMRRGDFHSTFPVCAGGEIRTGYT CNVLMRMDAKAIRGRRFRLDRGQTGGEDTAFFDEVYRAGGRIVYAPDAWTDEIVPKDRATFGWLLRRRYRVGQTHGRLLA DHKSGLGFAAALALVAAKIAYCAGCTLLTAPWTMSRNRNILRGAMHAGALSGLLGGNELRQYGIQTAGEGHGHAT
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34569; Mature: 34438
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAIISDAIDICVCTFRRPALAQTLRSLAGLKLPENYKVSIIIADNDDSPTARDLVIGM CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHH MDELRPPVHYIHAPARNISLARNACLDASYARFVAFIDDDETATEEWLLRLVKAAEGSRA HHHCCCCCEEEECCCCCHHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHHHHHHCCCCCC DVVLGPVRAGYGVDAPEWMRRGDFHSTFPVCAGGEIRTGYTCNVLMRMDAKAIRGRRFRL CEEEECCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCEEEEEEECCHHHHCCCEEEE DRGQTGGEDTAFFDEVYRAGGRIVYAPDAWTDEIVPKDRATFGWLLRRRYRVGQTHGRLL CCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE ADHKSGLGFAAALALVAAKIAYCAGCTLLTAPWTMSRNRNILRGAMHAGALSGLLGGNEL ECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHH RQYGIQTAGEGHGHAT HHHCCCCCCCCCCCCC >Mature Secondary Structure TDAIISDAIDICVCTFRRPALAQTLRSLAGLKLPENYKVSIIIADNDDSPTARDLVIGM CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHH MDELRPPVHYIHAPARNISLARNACLDASYARFVAFIDDDETATEEWLLRLVKAAEGSRA HHHCCCCCEEEECCCCCHHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHHHHHHCCCCCC DVVLGPVRAGYGVDAPEWMRRGDFHSTFPVCAGGEIRTGYTCNVLMRMDAKAIRGRRFRL CEEEECCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCEEEEEEECCHHHHCCCEEEE DRGQTGGEDTAFFDEVYRAGGRIVYAPDAWTDEIVPKDRATFGWLLRRRYRVGQTHGRLL CCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE ADHKSGLGFAAALALVAAKIAYCAGCTLLTAPWTMSRNRNILRGAMHAGALSGLLGGNEL ECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHH RQYGIQTAGEGHGHAT HHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]