Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is exoL [H]
Identifier: 110633013
GI number: 110633013
Start: 733313
End: 734491
Strand: Direct
Name: exoL [H]
Synonym: Meso_0656
Alternate gene names: 110633013
Gene position: 733313-734491 (Clockwise)
Preceding gene: 110633012
Following gene: 110633014
Centisome position: 16.62
GC content: 61.07
Gene sequence:
>1179_bases ATGCTGCATGTGCTCTATCTCGTTTTCAACCTGGCGGATCCGGCGGTTCGTCGTCGGGTGATGATGTTGAAAGCGGGTGG CGCGAACGTGACGCTCGCGGGCTTCCGCAGGACCGCAGAGCCGCTCGATGAAATCGAGGGCATCCGCCCGATCGATCTCG GCATCAGTCATGACGGTCAATTCGCGCAGCGGGTAGTTGCGGTTCTGAGTGCCGCCGCGTCACTTAGCGCGAAGTTGAAG GGCACCGCGAAGCCTGACGTGATTGTCGCCCGAAATCTTGAAATGCTCGCGCTTGCTGCTCGGGCAAAGGCGGTTCTTGG CGCGGGTGATCTTCCCGTGGCCTATGAGAGCCTTGATATTCACCGCCTGCTGCTGCGGCAAGATCCGCTGGGGAAAGGGC TCCGCTTCCTTGAGCGCTATTTCGCGCGCAATTCCAAGCTCCTCATCACCAGTTCGCCGGCTTTCGTGCGCAATTACTTC CTGCCGCGAGGGCAGGTGAGCGCACCCGTGGAGCTGGTTGAGAACAAGCATTTTGAATTGACCCCGACCGGCGATTCAAA TGGCCAACCAGCAGAGCGCATCGCGCCGCCCTGGCGCATCGGCTGGTTTGGCGCGCTCCGCTGCCGTCGCTCGCTCGCGG TCCTATCGGAATTCTCCCGCCGCTCGGAGGGGCGCTTTCAAGTGACGCTAAGGGGCCGGCCCGCCCTCCGGGAATTTGAG GATTTCGCCGGCGCGATTGCCTGCGAACCCTTTCTTTCTTTCGACGGCCCCTATCGCAATCCCGAGGATCTCTCCGCGAT CTACGGCAAAATTCATTTCTCCTGGGTTATCGATTTCTTTGAGGAAGGGCAGAATTCGAAGTGGCTTCTGCCCAACCGGC TCTACGAAGGCTGCCGTTTCGGCGCGGTGCCGATCGCAATGCGCGATACGGAAACCGCGCGTTTCCTGGAGGAGCGTGGA CTTGGCATCATTCTGCCTGAGGCTACGCCAGATGCTCTTGAGCGTGCCGTTGGGGACATGGATTGGCCTCGCTACCGGGC GCTGCGCAGCCGCATTCTGGCGGTGGACCGAAAAACCTGGAGCTGTGACCGGCAGGACTGCATTGATTTCGTTGCACGGC TCAATCGCCTGGCGGCTGCCCCACCGCCCCGAATTGCCCAAGCTCTCGCTCAAGCATGA
Upstream 100 bases:
>100_bases TTAAACTGAATTTCAGAAGAAATTCTGGACAGTATGTTGCAGTGCAGCGTCGGCTGTTATAGCTTTTGCCAGGGGGCGGA CAAACCATGGGGTGTGTCCA
Downstream 100 bases:
>100_bases CATATGGAGACGATGACCGGATGACGGACCGCTGGCCTCCCTCCTGCCTGATCATCATTCCCTGCCTGAATGAAGCCGCG CATATCGGCGCCCTCCTGGG
Product: glycosyltransferase, succinoglycan biosynthesis protein EXOL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MLHVLYLVFNLADPAVRRRVMMLKAGGANVTLAGFRRTAEPLDEIEGIRPIDLGISHDGQFAQRVVAVLSAAASLSAKLK GTAKPDVIVARNLEMLALAARAKAVLGAGDLPVAYESLDIHRLLLRQDPLGKGLRFLERYFARNSKLLITSSPAFVRNYF LPRGQVSAPVELVENKHFELTPTGDSNGQPAERIAPPWRIGWFGALRCRRSLAVLSEFSRRSEGRFQVTLRGRPALREFE DFAGAIACEPFLSFDGPYRNPEDLSAIYGKIHFSWVIDFFEEGQNSKWLLPNRLYEGCRFGAVPIAMRDTETARFLEERG LGIILPEATPDALERAVGDMDWPRYRALRSRILAVDRKTWSCDRQDCIDFVARLNRLAAAPPPRIAQALAQA
Sequences:
>Translated_392_residues MLHVLYLVFNLADPAVRRRVMMLKAGGANVTLAGFRRTAEPLDEIEGIRPIDLGISHDGQFAQRVVAVLSAAASLSAKLK GTAKPDVIVARNLEMLALAARAKAVLGAGDLPVAYESLDIHRLLLRQDPLGKGLRFLERYFARNSKLLITSSPAFVRNYF LPRGQVSAPVELVENKHFELTPTGDSNGQPAERIAPPWRIGWFGALRCRRSLAVLSEFSRRSEGRFQVTLRGRPALREFE DFAGAIACEPFLSFDGPYRNPEDLSAIYGKIHFSWVIDFFEEGQNSKWLLPNRLYEGCRFGAVPIAMRDTETARFLEERG LGIILPEATPDALERAVGDMDWPRYRALRSRILAVDRKTWSCDRQDCIDFVARLNRLAAAPPPRIAQALAQA >Mature_392_residues MLHVLYLVFNLADPAVRRRVMMLKAGGANVTLAGFRRTAEPLDEIEGIRPIDLGISHDGQFAQRVVAVLSAAASLSAKLK GTAKPDVIVARNLEMLALAARAKAVLGAGDLPVAYESLDIHRLLLRQDPLGKGLRFLERYFARNSKLLITSSPAFVRNYF LPRGQVSAPVELVENKHFELTPTGDSNGQPAERIAPPWRIGWFGALRCRRSLAVLSEFSRRSEGRFQVTLRGRPALREFE DFAGAIACEPFLSFDGPYRNPEDLSAIYGKIHFSWVIDFFEEGQNSKWLLPNRLYEGCRFGAVPIAMRDTETARFLEERG LGIILPEATPDALERAVGDMDWPRYRALRSRILAVDRKTWSCDRQDCIDFVARLNRLAAAPPPRIAQALAQA
Specific function: Essential for succinoglycan (EPS I) synthesis and nodule infection. Glycosyltransferase needed for the addition of the third sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the second and third sugars [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43752; Mature: 43752
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHVLYLVFNLADPAVRRRVMMLKAGGANVTLAGFRRTAEPLDEIEGIRPIDLGISHDGQ CCEEEEHHHHCCCHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHCCCCEEECCCCCCHH FAQRVVAVLSAAASLSAKLKGTAKPDVIVARNLEMLALAARAKAVLGAGDLPVAYESLDI HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHH HRLLLRQDPLGKGLRFLERYFARNSKLLITSSPAFVRNYFLPRGQVSAPVELVENKHFEL HHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCHHHHCCCCEEE TPTGDSNGQPAERIAPPWRIGWFGALRCRRSLAVLSEFSRRSEGRFQVTLRGRPALREFE ECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH DFAGAIACEPFLSFDGPYRNPEDLSAIYGKIHFSWVIDFFEEGQNSKWLLPNRLYEGCRF HHHCCEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHCCCCC GAVPIAMRDTETARFLEERGLGIILPEATPDALERAVGDMDWPRYRALRSRILAVDRKTW CCCEEEECCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC SCDRQDCIDFVARLNRLAAAPPPRIAQALAQA CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MLHVLYLVFNLADPAVRRRVMMLKAGGANVTLAGFRRTAEPLDEIEGIRPIDLGISHDGQ CCEEEEHHHHCCCHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHCCCCEEECCCCCCHH FAQRVVAVLSAAASLSAKLKGTAKPDVIVARNLEMLALAARAKAVLGAGDLPVAYESLDI HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHH HRLLLRQDPLGKGLRFLERYFARNSKLLITSSPAFVRNYFLPRGQVSAPVELVENKHFEL HHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCHHHHCCCCEEE TPTGDSNGQPAERIAPPWRIGWFGALRCRRSLAVLSEFSRRSEGRFQVTLRGRPALREFE ECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH DFAGAIACEPFLSFDGPYRNPEDLSAIYGKIHFSWVIDFFEEGQNSKWLLPNRLYEGCRF HHHCCEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHCCCCC GAVPIAMRDTETARFLEERGLGIILPEATPDALERAVGDMDWPRYRALRSRILAVDRKTW CCCEEEECCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC SCDRQDCIDFVARLNRLAAAPPPRIAQALAQA CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226645; 8479421; 11481431; 8246891 [H]