| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632912
Identifier: 110632912
GI number: 110632912
Start: 611754
End: 612662
Strand: Direct
Name: 110632912
Synonym: Meso_0552
Alternate gene names: NA
Gene position: 611754-612662 (Clockwise)
Preceding gene: 110632911
Following gene: 110632913
Centisome position: 13.86
GC content: 57.87
Gene sequence:
>909_bases ATGAGCGAGCCGACCCGCCTCCGGCCGCTAAGGGAGGCGTCCCGAATCACGCAGATGCTCGATCTGGTGCTTGGAGTAGA TCGATTTGATCGCGCACCGGTCGATATAATCAATTTGGCATTAGAGTACTCCCGTCAGATCGCGCCAGAGAGCCCGATCC ACGAGGTAGTGGAGCGCAACCTCCCGGGCTGCGTGGGCGCATTGGTATATGGAAAGGCCAGTCCACGCCAATGGGCAATC ATGTACCATGCCGGCCAGTCGAACGGACGGCGTTCGTTCACGGTGGGGCACGAGTTCGCCCACTACCTCCTGCACCGTCA GCTGATAGAGCAGGACAAAGGCCTGAAGGGCGGCATTTACTGTGACGAGAACTCGGTGGACCGCCGCGGGGGAGCCGGTA TCGAACAGGAGGCCGATGAGTTCACCGCGGCTCTGCTGATGCCACTCCACGATTTTCGCCGACAGCAGCCAGCCAAAGAA CGGGTGGATTTTGACAAGCTCAGCCGCCTCGCCAAGCGTTACGGCGTGTCGTTAACTGCGGCGATCCTTCGCTGGCTTGA ATACACTGAAACACGGGCGATGATGGTGGTCTCGAACGAAGGCTTTGCCCACTGGGCGAAACCAAGTGGTCCCGCGCTGA AGTCGGGGAGATTCATTAGGACCAAGAGCACAGTCTATGAGTTACCCTCGCAAGCGTTGGCGGCAAGGCGCGACTACTCC GACAGTGCGCTGATCGGTATCACGCAACAAGCTGGCGTCTGGTTTGATGAACCCGTCCATGAAATGTGCTTTCGCTCCGA TCGGTATGACCAGGAAATAACCGTGCTGCAATTTGAGGCAGATGGCCCACGCTTTCAGGAGGAAGAAGAAGAGGGTGATG CTTTCGATCATCTGATACGGAACGGATAG
Upstream 100 bases:
>100_bases CGGAGGATACTGCCTTCTTCCGGCAGTATAGCGGTCTGCCAGAGGAAACACGCCGACAGATTAGAGAGATGGCTCGTATC CTCGACACGAAGAGCCGTAA
Downstream 100 bases:
>100_bases GCTCTCACTTCTTGACGGTGGGAGGTGTCGAAACGTACCAGGCTTGGGCAGCGGCAATTCCAGCCAGGACAATGTTCGAT CTCGGCCCGTTCGATGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSEPTRLRPLREASRITQMLDLVLGVDRFDRAPVDIINLALEYSRQIAPESPIHEVVERNLPGCVGALVYGKASPRQWAI MYHAGQSNGRRSFTVGHEFAHYLLHRQLIEQDKGLKGGIYCDENSVDRRGGAGIEQEADEFTAALLMPLHDFRRQQPAKE RVDFDKLSRLAKRYGVSLTAAILRWLEYTETRAMMVVSNEGFAHWAKPSGPALKSGRFIRTKSTVYELPSQALAARRDYS DSALIGITQQAGVWFDEPVHEMCFRSDRYDQEITVLQFEADGPRFQEEEEEGDAFDHLIRNG
Sequences:
>Translated_302_residues MSEPTRLRPLREASRITQMLDLVLGVDRFDRAPVDIINLALEYSRQIAPESPIHEVVERNLPGCVGALVYGKASPRQWAI MYHAGQSNGRRSFTVGHEFAHYLLHRQLIEQDKGLKGGIYCDENSVDRRGGAGIEQEADEFTAALLMPLHDFRRQQPAKE RVDFDKLSRLAKRYGVSLTAAILRWLEYTETRAMMVVSNEGFAHWAKPSGPALKSGRFIRTKSTVYELPSQALAARRDYS DSALIGITQQAGVWFDEPVHEMCFRSDRYDQEITVLQFEADGPRFQEEEEEGDAFDHLIRNG >Mature_301_residues SEPTRLRPLREASRITQMLDLVLGVDRFDRAPVDIINLALEYSRQIAPESPIHEVVERNLPGCVGALVYGKASPRQWAIM YHAGQSNGRRSFTVGHEFAHYLLHRQLIEQDKGLKGGIYCDENSVDRRGGAGIEQEADEFTAALLMPLHDFRRQQPAKER VDFDKLSRLAKRYGVSLTAAILRWLEYTETRAMMVVSNEGFAHWAKPSGPALKSGRFIRTKSTVYELPSQALAARRDYSD SALIGITQQAGVWFDEPVHEMCFRSDRYDQEITVLQFEADGPRFQEEEEEGDAFDHLIRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34326; Mature: 34195
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPTRLRPLREASRITQMLDLVLGVDRFDRAPVDIINLALEYSRQIAPESPIHEVVERN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC LPGCVGALVYGKASPRQWAIMYHAGQSNGRRSFTVGHEFAHYLLHRQLIEQDKGLKGGIY CCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEE CDENSVDRRGGAGIEQEADEFTAALLMPLHDFRRQQPAKERVDFDKLSRLAKRYGVSLTA ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCHHHH AILRWLEYTETRAMMVVSNEGFAHWAKPSGPALKSGRFIRTKSTVYELPSQALAARRDYS HHHHHHHHHCCEEEEEEECCCCEECCCCCCCCCCCCCEEEEHHHHHHCCHHHHHHHCCCC DSALIGITQQAGVWFDEPVHEMCFRSDRYDQEITVLQFEADGPRFQEEEEEGDAFDHLIR CCEEEEEEHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHCHHHHHHHH NG CC >Mature Secondary Structure SEPTRLRPLREASRITQMLDLVLGVDRFDRAPVDIINLALEYSRQIAPESPIHEVVERN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC LPGCVGALVYGKASPRQWAIMYHAGQSNGRRSFTVGHEFAHYLLHRQLIEQDKGLKGGIY CCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEE CDENSVDRRGGAGIEQEADEFTAALLMPLHDFRRQQPAKERVDFDKLSRLAKRYGVSLTA ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCHHHH AILRWLEYTETRAMMVVSNEGFAHWAKPSGPALKSGRFIRTKSTVYELPSQALAARRDYS HHHHHHHHHCCEEEEEEECCCCEECCCCCCCCCCCCCEEEEHHHHHHCCHHHHHHHCCCC DSALIGITQQAGVWFDEPVHEMCFRSDRYDQEITVLQFEADGPRFQEEEEEGDAFDHLIR CCEEEEEEHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHCHHHHHHHH NG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA