| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is wcaI [C]
Identifier: 110632852
GI number: 110632852
Start: 546542
End: 547774
Strand: Direct
Name: wcaI [C]
Synonym: Meso_0492
Alternate gene names: 110632852
Gene position: 546542-547774 (Clockwise)
Preceding gene: 110632845
Following gene: 110632853
Centisome position: 12.39
GC content: 55.31
Gene sequence:
>1233_bases ATGAAAATCTGGTACGTCCGTGATCTCGAGCCGGTTCCTACGGATCCCGGCAATCCGCGGCTCTTACGTGCTGGTCTGCT AGCCACGACACTTTCTTCTCTCGGACATGAAACTACTTGGTACACCTCCACCTTCAACCACTATTCGCGACGGCAGCGGA AAGCCGAGATACTCCGGCCAAGCGAGAACCTGAGCATCCGGGTCCTTCCGGCCCCCGGCTACAGCCGGAACATCAGTGTG AAGCGCGTTTTCCACAATCGGAGCTTTGCGCAGGCATTTCTGACTGTAGCAAATGCGGCGCAGGAACTGCCGGATATTCT CGTCGCGGACCTGCCGACCACCGACGCAGCCGCTGCCGCAGTTCAATTCGCCCGGCGGAGAGGAATTCCGACCGTAATTA CCATCAGAGATTTGTGGCCGGATTTCTTTGCTGATTTCGTTCCATCCGCGTTAAGCCCGTTTGCGAAACTCGCTACATTG CCTCTTGAAATGCAGGCACGGTTCGCCTGCCGCCACGCGACCTCTTTGGTGGGGATCTCCGAGCAATATCTTGAATGGGG GAGGGAGAAGGGCGGTCGCACTTCCGTCGAACACGATCGCATCTTCCCGCTTGGCTATCTCAAACCACGACAGCTCGAGA GTGATGAAATCGACAAGATTCTCGGTCAAATGGGGATCAGTTCAGATCAGCACATCGTCTCGTTCGTCGGATCGTGGGGT GCCACATACGATCTGTCCCTCGTTTTGGAAGCAGCCCGTCTACTTGCGCATAGAAAAGACGTCGTCTTCGCCCTGGCGGG CAATGCCGCTGAAAGGCCTGATCTAGAGCGTTCGTTTCGAAAACTGGACAACACTGTCCTCCTCGGTTGGATAAGCCAGC CCGAGGTCAGCGCGCTTTTAACGCGATCCTCTATCGGGCTGCTGCCATACGCGAAACAGGCTCCTCAGGGGCTACCCAAC AAGGTTTACGAGTATTTGGCATTCGGCACCTTCCAACTTGCCATCCTGGGAGAAGAAGCGGAGCACCTATATAGGGAGAC GGCAGCCGGCCTTAATGTTCCGAATGCATCACCGCTTGAACTTGCAAATGCCATCGAAGCAGTGCTCTCCGATAGCCGTC TGATCAAGGCGCGAGAGGAACGCATCGCGATCTTCAACACCCGCTTCGACGCACGGAAAATTTATCGCGACATAGCAGAT CACATAGTCAAGGTGGCAAGTAAAAAGCTTTGA
Upstream 100 bases:
>100_bases ATAAAGCTGATTTGCACCGTCAAAAGCGATTTGCGGAGCGGGCAAGCAAGAGATATCAGGCCCGTGTTGGATCTGACAAA TCCGGTGAAAGCTGAGTAAA
Downstream 100 bases:
>100_bases TCGGTCAATGTTCCTCTGCCTTCATCGCGTCAGAGATTAGAAATTGTGCCGCCCTGTGGAGCTAACATCGCGGGATCTTT CGACCCGCTCCACAGAAACG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKIWYVRDLEPVPTDPGNPRLLRAGLLATTLSSLGHETTWYTSTFNHYSRRQRKAEILRPSENLSIRVLPAPGYSRNISV KRVFHNRSFAQAFLTVANAAQELPDILVADLPTTDAAAAAVQFARRRGIPTVITIRDLWPDFFADFVPSALSPFAKLATL PLEMQARFACRHATSLVGISEQYLEWGREKGGRTSVEHDRIFPLGYLKPRQLESDEIDKILGQMGISSDQHIVSFVGSWG ATYDLSLVLEAARLLAHRKDVVFALAGNAAERPDLERSFRKLDNTVLLGWISQPEVSALLTRSSIGLLPYAKQAPQGLPN KVYEYLAFGTFQLAILGEEAEHLYRETAAGLNVPNASPLELANAIEAVLSDSRLIKAREERIAIFNTRFDARKIYRDIAD HIVKVASKKL
Sequences:
>Translated_410_residues MKIWYVRDLEPVPTDPGNPRLLRAGLLATTLSSLGHETTWYTSTFNHYSRRQRKAEILRPSENLSIRVLPAPGYSRNISV KRVFHNRSFAQAFLTVANAAQELPDILVADLPTTDAAAAAVQFARRRGIPTVITIRDLWPDFFADFVPSALSPFAKLATL PLEMQARFACRHATSLVGISEQYLEWGREKGGRTSVEHDRIFPLGYLKPRQLESDEIDKILGQMGISSDQHIVSFVGSWG ATYDLSLVLEAARLLAHRKDVVFALAGNAAERPDLERSFRKLDNTVLLGWISQPEVSALLTRSSIGLLPYAKQAPQGLPN KVYEYLAFGTFQLAILGEEAEHLYRETAAGLNVPNASPLELANAIEAVLSDSRLIKAREERIAIFNTRFDARKIYRDIAD HIVKVASKKL >Mature_410_residues MKIWYVRDLEPVPTDPGNPRLLRAGLLATTLSSLGHETTWYTSTFNHYSRRQRKAEILRPSENLSIRVLPAPGYSRNISV KRVFHNRSFAQAFLTVANAAQELPDILVADLPTTDAAAAAVQFARRRGIPTVITIRDLWPDFFADFVPSALSPFAKLATL PLEMQARFACRHATSLVGISEQYLEWGREKGGRTSVEHDRIFPLGYLKPRQLESDEIDKILGQMGISSDQHIVSFVGSWG ATYDLSLVLEAARLLAHRKDVVFALAGNAAERPDLERSFRKLDNTVLLGWISQPEVSALLTRSSIGLLPYAKQAPQGLPN KVYEYLAFGTFQLAILGEEAEHLYRETAAGLNVPNASPLELANAIEAVLSDSRLIKAREERIAIFNTRFDARKIYRDIAD HIVKVASKKL
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45759; Mature: 45759
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWYVRDLEPVPTDPGNPRLLRAGLLATTLSSLGHETTWYTSTFNHYSRRQRKAEILRP CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC SENLSIRVLPAPGYSRNISVKRVFHNRSFAQAFLTVANAAQELPDILVADLPTTDAAAAA CCCCEEEEEECCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHH VQFARRRGIPTVITIRDLWPDFFADFVPSALSPFAKLATLPLEMQARFACRHATSLVGIS HHHHHHCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH EQYLEWGREKGGRTSVEHDRIFPLGYLKPRQLESDEIDKILGQMGISSDQHIVSFVGSWG HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC ATYDLSLVLEAARLLAHRKDVVFALAGNAAERPDLERSFRKLDNTVLLGWISQPEVSALL CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCEEEEEECCCCHHHHHH TRSSIGLLPYAKQAPQGLPNKVYEYLAFGTFQLAILGEEAEHLYRETAAGLNVPNASPLE HHHCCCCCCCHHHCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHCCCCCCCCCHHH LANAIEAVLSDSRLIKAREERIAIFNTRFDARKIYRDIADHIVKVASKKL HHHHHHHHHCCHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIWYVRDLEPVPTDPGNPRLLRAGLLATTLSSLGHETTWYTSTFNHYSRRQRKAEILRP CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC SENLSIRVLPAPGYSRNISVKRVFHNRSFAQAFLTVANAAQELPDILVADLPTTDAAAAA CCCCEEEEEECCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHH VQFARRRGIPTVITIRDLWPDFFADFVPSALSPFAKLATLPLEMQARFACRHATSLVGIS HHHHHHCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH EQYLEWGREKGGRTSVEHDRIFPLGYLKPRQLESDEIDKILGQMGISSDQHIVSFVGSWG HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC ATYDLSLVLEAARLLAHRKDVVFALAGNAAERPDLERSFRKLDNTVLLGWISQPEVSALL CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCEEEEEECCCCHHHHHH TRSSIGLLPYAKQAPQGLPNKVYEYLAFGTFQLAILGEEAEHLYRETAAGLNVPNASPLE HHHCCCCCCCHHHCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHCCCCCCCCCHHH LANAIEAVLSDSRLIKAREERIAIFNTRFDARKIYRDIADHIVKVASKKL HHHHHHHHHCCHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA