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The map label for this gene is oxyR [H]

Identifier: 110632826

GI number: 110632826

Start: 512954

End: 513850

Strand: Direct

Name: oxyR [H]

Synonym: Meso_0465

Alternate gene names: 110632826

Gene position: 512954-513850 (Clockwise)

Preceding gene: 110632824

Following gene: 110632827

Centisome position: 11.63

GC content: 62.21

Gene sequence:

>897_bases
ATGACGCGCTTGACCCTCCGCCAAATGCAATACTTTCAGCGCTTGGCTGAACTCCTGCATTTCGGCCGGGCTGCCGCCGC
ATGCGGCGTGACGCAGCCCGCGCTTTCAGCACAAATAGCCGAGATGGAAGCGCAGCTTGGCTTTCAGCTCTTCGAGCGGG
GCGGTGGAGCCGTCCGGCTCACCCAGGAGGCGCAGGAGTTGCGCCCGCGCATCGAGCGGATCCTGGCGGAGGTGGAAGAT
CTGGAGCATATGGCCCGGCGCGACCAAAACGCGCTGGGGGAGCGGTTCCGCTTGGGGATCATCCCAACGGTGGCGCCTTT
TCTTCTGCCGCGCCTTTTGCCGAAGCTCAAGCAAGACTTCCCTTCCCTCAGACTGGAGGTGCGCGAGGCGGTAACGGACA
CGCTTATCCAGGAGACAAGCGCAGGGAGGCTCGATGGCATGATCGCCGCCGCTCCCATTGAATCGCCGCAACTCAAAAGC
GAGATGCTCTTCGAGGATCGGTTCTATCTTGCGGTTCCCGAAGTGGACGCGGAACGGCTGGCACCGCCTGTGGCGCAGGA
GAGCATGGCGCTGGAGCGGCTCATGCTGCTTGAGGACGGTCACTGCATGCGCAACCAGGCGCTGGCGATCTGCGGTATGG
TTAAGCCCATAACGATGGCAAGCCTGGGGGCGACGAGCCTCATGACCCTGCTGCAACTCGTCGCTCACGGGTTCGGGGTG
ACCTTGGTCCCGGAGATGGCGCGCGAGTCGGCGGACGCTCAGCAGGGCCTTCGCGTCCTGCCGTTTGTCGATCCTGCGCC
GGCGCGCACCATATGTCTTTCCTGGCGCAAGACCAATACTCGCGAAGCCGACTTTGCTGCTTTAAGTAAAACCGTCAAAG
ATTTGCATCGGTTATAA

Upstream 100 bases:

>100_bases
TGCGTTTTTCCAGCGCATGATGCTCGGAACAATTCCAAACAGCCCGTTGTTCGTGATAATGGCCGGTTGCCTCTCGTCGT
CGCTGCGATAAGATTTCTTT

Downstream 100 bases:

>100_bases
TAGTAGAATTGCGGTGAGCCTCTCCGCCAAGAGCCCAAAAACTTGCTTTCAAAAATAAATTGTAGGATGATTCATCGCTT
TTACAATTGTGGGGATGATT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MTRLTLRQMQYFQRLAELLHFGRAAAACGVTQPALSAQIAEMEAQLGFQLFERGGGAVRLTQEAQELRPRIERILAEVED
LEHMARRDQNALGERFRLGIIPTVAPFLLPRLLPKLKQDFPSLRLEVREAVTDTLIQETSAGRLDGMIAAAPIESPQLKS
EMLFEDRFYLAVPEVDAERLAPPVAQESMALERLMLLEDGHCMRNQALAICGMVKPITMASLGATSLMTLLQLVAHGFGV
TLVPEMARESADAQQGLRVLPFVDPAPARTICLSWRKTNTREADFAALSKTVKDLHRL

Sequences:

>Translated_298_residues
MTRLTLRQMQYFQRLAELLHFGRAAAACGVTQPALSAQIAEMEAQLGFQLFERGGGAVRLTQEAQELRPRIERILAEVED
LEHMARRDQNALGERFRLGIIPTVAPFLLPRLLPKLKQDFPSLRLEVREAVTDTLIQETSAGRLDGMIAAAPIESPQLKS
EMLFEDRFYLAVPEVDAERLAPPVAQESMALERLMLLEDGHCMRNQALAICGMVKPITMASLGATSLMTLLQLVAHGFGV
TLVPEMARESADAQQGLRVLPFVDPAPARTICLSWRKTNTREADFAALSKTVKDLHRL
>Mature_297_residues
TRLTLRQMQYFQRLAELLHFGRAAAACGVTQPALSAQIAEMEAQLGFQLFERGGGAVRLTQEAQELRPRIERILAEVEDL
EHMARRDQNALGERFRLGIIPTVAPFLLPRLLPKLKQDFPSLRLEVREAVTDTLIQETSAGRLDGMIAAAPIESPQLKSE
MLFEDRFYLAVPEVDAERLAPPVAQESMALERLMLLEDGHCMRNQALAICGMVKPITMASLGATSLMTLLQLVAHGFGVT
LVPEMARESADAQQGLRVLPFVDPAPARTICLSWRKTNTREADFAALSKTVKDLHRL

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=292, Percent_Identity=36.6438356164384, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI157672245, Length=284, Percent_Identity=28.169014084507, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1788887, Length=300, Percent_Identity=26.6666666666667, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787879, Length=284, Percent_Identity=26.4084507042254, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788481, Length=245, Percent_Identity=27.3469387755102, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI2367136, Length=246, Percent_Identity=28.8617886178862, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI145693105, Length=279, Percent_Identity=26.1648745519713, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081904, Length=197, Percent_Identity=26.9035532994924, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1790208, Length=257, Percent_Identity=27.6264591439689, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI48994962, Length=174, Percent_Identity=26.4367816091954, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788748, Length=293, Percent_Identity=23.8907849829352, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33123; Mature: 32992

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLTLRQMQYFQRLAELLHFGRAAAACGVTQPALSAQIAEMEAQLGFQLFERGGGAVRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
TQEAQELRPRIERILAEVEDLEHMARRDQNALGERFRLGIIPTVAPFLLPRLLPKLKQDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PSLRLEVREAVTDTLIQETSAGRLDGMIAAAPIESPQLKSEMLFEDRFYLAVPEVDAERL
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCEEEECCCCCHHHC
APPVAQESMALERLMLLEDGHCMRNQALAICGMVKPITMASLGATSLMTLLQLVAHGFGV
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
TLVPEMARESADAQQGLRVLPFVDPAPARTICLSWRKTNTREADFAALSKTVKDLHRL
EECHHHHHHCCHHHCCCEEECCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRLTLRQMQYFQRLAELLHFGRAAAACGVTQPALSAQIAEMEAQLGFQLFERGGGAVRL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
TQEAQELRPRIERILAEVEDLEHMARRDQNALGERFRLGIIPTVAPFLLPRLLPKLKQDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PSLRLEVREAVTDTLIQETSAGRLDGMIAAAPIESPQLKSEMLFEDRFYLAVPEVDAERL
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCCEEEECCCCCHHHC
APPVAQESMALERLMLLEDGHCMRNQALAICGMVKPITMASLGATSLMTLLQLVAHGFGV
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
TLVPEMARESADAQQGLRVLPFVDPAPARTICLSWRKTNTREADFAALSKTVKDLHRL
EECHHHHHHCCHHHCCCEEECCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA