| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632745
Identifier: 110632745
GI number: 110632745
Start: 425098
End: 426060
Strand: Reverse
Name: 110632745
Synonym: Meso_0384
Alternate gene names: NA
Gene position: 426060-425098 (Counterclockwise)
Preceding gene: 110632746
Following gene: 110632744
Centisome position: 9.66
GC content: 65.32
Gene sequence:
>963_bases ATGCGCTATTTCAATCTCGCCATTTCGGCGGCAGCTCTTGCCATATTCCCATCCCTGGCCACGGCCCATGTCTCGCTGGA GCAGCAGCAGGCCGCTCCCGGCACTTACAAGGCCGTTCTCAGCATTCCCCATGGCTGCGGCGGCGAGCCGACCATTTCCG TTCGAGTCGAGCTTCCGGAAGGCTTCATCGATGCAAAGCCCGTGCCGAAGCCCGGCTGGTCGATCGCGATCGAAGAGGGC AATTATGCCAGAGCCTATGATCTCCACGGAAACGAGGTCTCCTCGGGGCCGGTGGCGATCACCTGGTCCGGCGGCAGCCT CGCCGACGAGCATTATGACGAGTTCGCGGTGCGCGGCAGGCTGGCGAATGTCGAAGCCGGTCAGCGCCTCTATTTCAAGA CCGTCCAGACCTGTCCCTCGGGCGGTAAAAACGCCTGGGTGGAGGAGCCAGCGCCAGGGCAGGACCCTCATGCGCTCGAG TATCCGGCACCCTTCGTGACAATCGCCGCGGCCGAAAGCGCGGCGGAAGGACATCATCACGGCGCGGCCGCAATCTCTGC CGGAGACGTCCGGATCTCCGAGCCCTGGGCTCGCGCCATGCTGCCCGGCCAGCCCACCGGCGGGGCCTATATGACCATCC GCAACGAGGGCGCCGAGCCCGACAGGCTCCTCGCCGTCACCTCGCCCGCGGCCGGCAAGGTCGAGATTCATATGATGGAG ATGAAAGGCGAGGTCATGGAAATGCGGCCCGTCGAAGGCGGGCTCGAAGTCCCGGCCGGCGAAAGCGTATCGCTCAAGCC CGGCGGTCTCCATCTCATGTTCTTCGATGTCGAAACACCCTTCGCCGAAGGCGCCGAGGTGCCCGTCACGCTCGAATTCG AGAAAGCCGGCAGGGTGGAGCTGAGCCTTCCCGTTCTTCCGGCCAGCACCGGCCGCGGCGGCGGTGGGGCGCACCAGCAC TAA
Upstream 100 bases:
>100_bases CGGGCGAAACCTCCCCTCCCTCGATCCGCGCCCCTCCCCTTTCCGCGTGAGGTTACGGCACCGGCCGTTCGTTCCCCACG CAATTTGGAAAGGATTTCTC
Downstream 100 bases:
>100_bases CCTGAGGCAAGGGGCCGGCGCTTGCCGGCCCCTTCGCTTCGGGAACGGCCATGACCGCTCATGCGTTGAGAATGAAAAAG GAGCTTTCGATGCCCCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRYFNLAISAAALAIFPSLATAHVSLEQQQAAPGTYKAVLSIPHGCGGEPTISVRVELPEGFIDAKPVPKPGWSIAIEEG NYARAYDLHGNEVSSGPVAITWSGGSLADEHYDEFAVRGRLANVEAGQRLYFKTVQTCPSGGKNAWVEEPAPGQDPHALE YPAPFVTIAAAESAAEGHHHGAAAISAGDVRISEPWARAMLPGQPTGGAYMTIRNEGAEPDRLLAVTSPAAGKVEIHMME MKGEVMEMRPVEGGLEVPAGESVSLKPGGLHLMFFDVETPFAEGAEVPVTLEFEKAGRVELSLPVLPASTGRGGGGAHQH
Sequences:
>Translated_320_residues MRYFNLAISAAALAIFPSLATAHVSLEQQQAAPGTYKAVLSIPHGCGGEPTISVRVELPEGFIDAKPVPKPGWSIAIEEG NYARAYDLHGNEVSSGPVAITWSGGSLADEHYDEFAVRGRLANVEAGQRLYFKTVQTCPSGGKNAWVEEPAPGQDPHALE YPAPFVTIAAAESAAEGHHHGAAAISAGDVRISEPWARAMLPGQPTGGAYMTIRNEGAEPDRLLAVTSPAAGKVEIHMME MKGEVMEMRPVEGGLEVPAGESVSLKPGGLHLMFFDVETPFAEGAEVPVTLEFEKAGRVELSLPVLPASTGRGGGGAHQH >Mature_320_residues MRYFNLAISAAALAIFPSLATAHVSLEQQQAAPGTYKAVLSIPHGCGGEPTISVRVELPEGFIDAKPVPKPGWSIAIEEG NYARAYDLHGNEVSSGPVAITWSGGSLADEHYDEFAVRGRLANVEAGQRLYFKTVQTCPSGGKNAWVEEPAPGQDPHALE YPAPFVTIAAAESAAEGHHHGAAAISAGDVRISEPWARAMLPGQPTGGAYMTIRNEGAEPDRLLAVTSPAAGKVEIHMME MKGEVMEMRPVEGGLEVPAGESVSLKPGGLHLMFFDVETPFAEGAEVPVTLEFEKAGRVELSLPVLPASTGRGGGGAHQH
Specific function: Unknown
COG id: COG4549
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33630; Mature: 33630
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYFNLAISAAALAIFPSLATAHVSLEQQQAAPGTYKAVLSIPHGCGGEPTISVRVELPE CEEEEEEHHHHHHHHHHHHHEEEEEEHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCC GFIDAKPVPKPGWSIAIEEGNYARAYDLHGNEVSSGPVAITWSGGSLADEHYDEFAVRGR CCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCE LANVEAGQRLYFKTVQTCPSGGKNAWVEEPAPGQDPHALEYPAPFVTIAAAESAAEGHHH EECCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCC GAAAISAGDVRISEPWARAMLPGQPTGGAYMTIRNEGAEPDRLLAVTSPAAGKVEIHMME CEEEEEECCEEECCCHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEE MKGEVMEMRPVEGGLEVPAGESVSLKPGGLHLMFFDVETPFAEGAEVPVTLEFEKAGRVE CCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEE LSLPVLPASTGRGGGGAHQH EEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MRYFNLAISAAALAIFPSLATAHVSLEQQQAAPGTYKAVLSIPHGCGGEPTISVRVELPE CEEEEEEHHHHHHHHHHHHHEEEEEEHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCC GFIDAKPVPKPGWSIAIEEGNYARAYDLHGNEVSSGPVAITWSGGSLADEHYDEFAVRGR CCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCE LANVEAGQRLYFKTVQTCPSGGKNAWVEEPAPGQDPHALEYPAPFVTIAAAESAAEGHHH EECCCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCC GAAAISAGDVRISEPWARAMLPGQPTGGAYMTIRNEGAEPDRLLAVTSPAAGKVEIHMME CEEEEEECCEEECCCHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEE MKGEVMEMRPVEGGLEVPAGESVSLKPGGLHLMFFDVETPFAEGAEVPVTLEFEKAGRVE CCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEE LSLPVLPASTGRGGGGAHQH EEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA