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The map label for this gene is flgF [H]

Identifier: 110632662

GI number: 110632662

Start: 336079

End: 336798

Strand: Reverse

Name: flgF [H]

Synonym: Meso_0301

Alternate gene names: 110632662

Gene position: 336798-336079 (Counterclockwise)

Preceding gene: 110632663

Following gene: 110632661

Centisome position: 7.63

GC content: 65.0

Gene sequence:

>720_bases
ATGCAGACGGGACTATACGTGGCGCTTTCTTCCCAGATGGCGCTGGAGCGTCGGCTTGCGACGCTCGCCGACAATGTTGC
GAACGCGGGAACAGTGGGCTTCCGGGCCGGCGGCATCACCTTTAGCGACGTGATGTCGGGCCTCTCAGAGGAGGCGGTCA
GCTTCGTCTCCACCGGCAGCAATTTCTACGATACGCGCGCGGGAGGGCTGCGGGAGACCGGCAGCCCCTTCGATTTCGCC
GTGCAGGGGGATGCATGGTTTGCCGTTGAAACACCCGCCGGGCCGGTGATGACGCGGGACGGCCGCTTCACCATGCGCGA
GACCGGCGAGCTTGTCACGCTCGAAGGTCATGCGGTGCTCGATGCCGGCGGCGCGCCGCTGGTGCTCGACCCGCAGGCGG
GGCCGCCCGAGGCCGGAGCGGACGGAATACTGCGCCAAAATGGACAACTTATTGGGGCGATCGGCCTCTTCTCCTTCACC
CCCGGCCCGAACGCCACCCGGTTCGGCAATTCGGGCTTTCTGCCGGATACACGCCCTCAGCCGGTGGTAGACCAGCCGGA
TGTGGGCATCGCGCAGGGTTTTCTGGAAGACTCGAACGTCAATCCGGTGAACGAGATGATGCGGCTGATACAGGTGCAGC
GCACCTTCGAGCAGGTGACCGCGCTGATGCGCGATAGCGACACCTCCATGAAGGACGCTATCCAGGCGATGGGCTCCTGA

Upstream 100 bases:

>100_bases
TCAGCCCGCAAAGCTCGATCGCCGCGCTTTTCAGCCAGCCCGCCGAATTCGGCATCTCCACGGACATCCTGCTCACCATC
GCACAGATGAGGAAATAGCC

Downstream 100 bases:

>100_bases
TGGAGCAGAGCGCAGCCGAAAACACCGGCCCCGATACAGCCGGGCAGGCCAACGCTCTTGCTGCGCTGGAATGCGTCTAC
CAGCGCTTTGGCGATCCGCA

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MQTGLYVALSSQMALERRLATLADNVANAGTVGFRAGGITFSDVMSGLSEEAVSFVSTGSNFYDTRAGGLRETGSPFDFA
VQGDAWFAVETPAGPVMTRDGRFTMRETGELVTLEGHAVLDAGGAPLVLDPQAGPPEAGADGILRQNGQLIGAIGLFSFT
PGPNATRFGNSGFLPDTRPQPVVDQPDVGIAQGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDAIQAMGS

Sequences:

>Translated_239_residues
MQTGLYVALSSQMALERRLATLADNVANAGTVGFRAGGITFSDVMSGLSEEAVSFVSTGSNFYDTRAGGLRETGSPFDFA
VQGDAWFAVETPAGPVMTRDGRFTMRETGELVTLEGHAVLDAGGAPLVLDPQAGPPEAGADGILRQNGQLIGAIGLFSFT
PGPNATRFGNSGFLPDTRPQPVVDQPDVGIAQGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDAIQAMGS
>Mature_239_residues
MQTGLYVALSSQMALERRLATLADNVANAGTVGFRAGGITFSDVMSGLSEEAVSFVSTGSNFYDTRAGGLRETGSPFDFA
VQGDAWFAVETPAGPVMTRDGRFTMRETGELVTLEGHAVLDAGGAPLVLDPQAGPPEAGADGILRQNGQLIGAIGLFSFT
PGPNATRFGNSGFLPDTRPQPVVDQPDVGIAQGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDAIQAMGS

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=232, Percent_Identity=30.6034482758621, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25182; Mature: 25182

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTGLYVALSSQMALERRLATLADNVANAGTVGFRAGGITFSDVMSGLSEEAVSFVSTGS
CCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEECCEEHHHHHCCHHHHHHHHHHCCC
NFYDTRAGGLRETGSPFDFAVQGDAWFAVETPAGPVMTRDGRFTMRETGELVTLEGHAVL
CCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCEEECCCCEEEECCCCEEEEECCEEE
DAGGAPLVLDPQAGPPEAGADGILRQNGQLIGAIGLFSFTPGPNATRFGNSGFLPDTRPQ
ECCCCCEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
PVVDQPDVGIAQGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDAIQAMGS
CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MQTGLYVALSSQMALERRLATLADNVANAGTVGFRAGGITFSDVMSGLSEEAVSFVSTGS
CCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEECCEEHHHHHCCHHHHHHHHHHCCC
NFYDTRAGGLRETGSPFDFAVQGDAWFAVETPAGPVMTRDGRFTMRETGELVTLEGHAVL
CCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCEEECCCCEEEECCCCEEEEECCEEE
DAGGAPLVLDPQAGPPEAGADGILRQNGQLIGAIGLFSFTPGPNATRFGNSGFLPDTRPQ
ECCCCCEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
PVVDQPDVGIAQGFLEDSNVNPVNEMMRLIQVQRTFEQVTALMRDSDTSMKDAIQAMGS
CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]